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The map label for this gene is 16119825

Identifier: 16119825

GI number: 16119825

Start: 20575

End: 21135

Strand: Direct

Name: 16119825

Synonym: Atu6013

Alternate gene names: NA

Gene position: 20575-21135 (Clockwise)

Preceding gene: 41223315

Following gene: 16119834

Centisome position: 9.6

GC content: 48.66

Gene sequence:

>561_bases
ATGACTCGGCAAGGTTGGCTTGTACCATGCCTTTCTCATGGCAAAGATGATCAACTGCAGGATGAACTCTCGGAGCTTTC
AAAAGCTTATCGAAAAAAGTTCCAAACCGATCTGCACACTAAGTCTGGCGACATCATCGATCCTAGCGGGGAATTTCTGT
ACGTCTATCTCGATGAAGAGAATTATCGGATATGCCGGCAAAGCATGGTTCTAGTTTCAAATGCTCCTGATGGATTGATT
GCCACGACGTTGGAGCCCTATTCTGACAGTTATACATTCCGGCAAGTGAGGGAGCAACTGCAAGCCTTCAGCGGAGACGG
TGGTCGGATCAACTACAGCAGAAATGAACACTCATCCTCGTACTTTCTAACAATTCAGGCCAGCAACGAGTTCAAGCACG
TAGGAGCCGTCCGGAACACTTTTGGTCAAAGCAAGGACATTTGGAAAAGGAGAATGCCAGACGCCAGCCAACCGTTGGAT
TATCACTTGATCGCTGTGGGCTGTTCAGCTTTCCTCCCTGAGGCTGCTCTTGATGACGTGGAGTCAGATGGTGCTGTCTA
G

Upstream 100 bases:

>100_bases
TGTCTTCAGTTTGCCTATTAATATTTAGTTTGACACTAATTGTTACCATTGCAGCCAAGCTCAGCTGTTTCTTTTCTTAA
AAACGCAGGATCGAAAGAGC

Downstream 100 bases:

>100_bases
TTTTAATGGCGCCGGGTTTCGAAGTCTATGTCATTCTAGTAGTTGCATCATAGAGGTGCTTATAAAATCTATTATTATGT
CAAGGTGTGTCTGAGAACCT

Product: 6a protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MTRQGWLVPCLSHGKDDQLQDELSELSKAYRKKFQTDLHTKSGDIIDPSGEFLYVYLDEENYRICRQSMVLVSNAPDGLI
ATTLEPYSDSYTFRQVREQLQAFSGDGGRINYSRNEHSSSYFLTIQASNEFKHVGAVRNTFGQSKDIWKRRMPDASQPLD
YHLIAVGCSAFLPEAALDDVESDGAV

Sequences:

>Translated_186_residues
MTRQGWLVPCLSHGKDDQLQDELSELSKAYRKKFQTDLHTKSGDIIDPSGEFLYVYLDEENYRICRQSMVLVSNAPDGLI
ATTLEPYSDSYTFRQVREQLQAFSGDGGRINYSRNEHSSSYFLTIQASNEFKHVGAVRNTFGQSKDIWKRRMPDASQPLD
YHLIAVGCSAFLPEAALDDVESDGAV
>Mature_185_residues
TRQGWLVPCLSHGKDDQLQDELSELSKAYRKKFQTDLHTKSGDIIDPSGEFLYVYLDEENYRICRQSMVLVSNAPDGLIA
TTLEPYSDSYTFRQVREQLQAFSGDGGRINYSRNEHSSSYFLTIQASNEFKHVGAVRNTFGQSKDIWKRRMPDASQPLDY
HLIAVGCSAFLPEAALDDVESDGAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006064 [H]

Pfam domain/function: PF02027 RolB_RolC [H]

EC number: NA

Molecular weight: Translated: 21026; Mature: 20894

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRQGWLVPCLSHGKDDQLQDELSELSKAYRKKFQTDLHTKSGDIIDPSGEFLYVYLDEE
CCCCCCEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEECCC
NYRICRQSMVLVSNAPDGLIATTLEPYSDSYTFRQVREQLQAFSGDGGRINYSRNEHSSS
CHHHHHHHEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCE
YFLTIQASNEFKHVGAVRNTFGQSKDIWKRRMPDASQPLDYHLIAVGCSAFLPEAALDDV
EEEEEEECCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEHEEECHHHHCCHHHHHCC
ESDGAV
CCCCCC
>Mature Secondary Structure 
TRQGWLVPCLSHGKDDQLQDELSELSKAYRKKFQTDLHTKSGDIIDPSGEFLYVYLDEE
CCCCCEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEECCC
NYRICRQSMVLVSNAPDGLIATTLEPYSDSYTFRQVREQLQAFSGDGGRINYSRNEHSSS
CHHHHHHHEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCE
YFLTIQASNEFKHVGAVRNTFGQSKDIWKRRMPDASQPLDYHLIAVGCSAFLPEAALDDV
EEEEEEECCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEHEEECHHHHCCHHHHHCC
ESDGAV
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6327292 [H]