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The map label for this gene is yofA [H]

Identifier: 57652438

GI number: 57652438

Start: 82254

End: 82988

Strand: Direct

Name: yofA [H]

Synonym: SACOL0074

Alternate gene names: 57652438

Gene position: 82254-82988 (Clockwise)

Preceding gene: 57652436

Following gene: 57652439

Centisome position: 2.93

GC content: 26.12

Gene sequence:

>735_bases
TTGAACTTTAATGATTTGGAAATTTTTATAACTGTATGTGAAGAAGCATCTATCAATAAAGCTGCAATTAAACTTAGATA
TGCACAATCTAATATATCTCAAAGAATTAGCAAGCTTGAAAATGAATTAGGTGTAGTTTTGCTTTTTAGAAATCAAAAAG
GTGCTAAGGCAACTAAAGCAGGCGAAGAATTCTTAGCGTATAGCAAAAAAGTATTAAGAGATACAGAGACTATAAAAAAT
AAAATGAAAAATAATACTATGTCTATTTTATGCTCAGAACTGTTATTTAATTATTTATCTGAGAGCGAAGAAATTATGAT
GTCGAATAACTCAATTAATTTTATTTCTAGTGGAAATATTAGAAAAGCTATAAAAAAAAATAATTATGATAAGGTTATTT
CATTCATAAAAATTAACGACTCAAATTATAGACTTAGTAATGTTGATACTATGAAAGTAACGCTTTACAGTAATGGAAGT
AATTATGATAAAGAGGCTTTACTAATAAATAAAGATGAGTTTTGTCCTTTAAGGAAAATAACTTTAGATAATAAGCTTGA
TTCACAACGGGTAATGGAAATTGATTCATTGGCAGCAATAATAAACTTAGTTAAACAAGGAAAAGGAAAGGCTTTATTAC
CTATGACTTTTGAGAATAAAAGAGATATAGTACAGGACATTTCTAAGATATTTGAAGTTAACTACTATACTTATAATCAT
ATTATGCATCATTAA

Upstream 100 bases:

>100_bases
TTTAGCATACCCCCTTTTATAAAAAGGATAGCAATAATAAGTAAAATCTCATATTATCCAATTGTGATATAGTTATCATA
AAAAGTGATAGGTGATTAAA

Downstream 100 bases:

>100_bases
TTGAAAGTTGATTGAGTTTAAATTACAGGAACGATTTTAAAAGTCTAGTAGTTAGAATGAGCGATGTGACAGAAAAGAAA
TTATGCCTTTTATTTTGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MNFNDLEIFITVCEEASINKAAIKLRYAQSNISQRISKLENELGVVLLFRNQKGAKATKAGEEFLAYSKKVLRDTETIKN
KMKNNTMSILCSELLFNYLSESEEIMMSNNSINFISSGNIRKAIKKNNYDKVISFIKINDSNYRLSNVDTMKVTLYSNGS
NYDKEALLINKDEFCPLRKITLDNKLDSQRVMEIDSLAAIINLVKQGKGKALLPMTFENKRDIVQDISKIFEVNYYTYNH
IMHH

Sequences:

>Translated_244_residues
MNFNDLEIFITVCEEASINKAAIKLRYAQSNISQRISKLENELGVVLLFRNQKGAKATKAGEEFLAYSKKVLRDTETIKN
KMKNNTMSILCSELLFNYLSESEEIMMSNNSINFISSGNIRKAIKKNNYDKVISFIKINDSNYRLSNVDTMKVTLYSNGS
NYDKEALLINKDEFCPLRKITLDNKLDSQRVMEIDSLAAIINLVKQGKGKALLPMTFENKRDIVQDISKIFEVNYYTYNH
IMHH
>Mature_244_residues
MNFNDLEIFITVCEEASINKAAIKLRYAQSNISQRISKLENELGVVLLFRNQKGAKATKAGEEFLAYSKKVLRDTETIKN
KMKNNTMSILCSELLFNYLSESEEIMMSNNSINFISSGNIRKAIKKNNYDKVISFIKINDSNYRLSNVDTMKVTLYSNGS
NYDKEALLINKDEFCPLRKITLDNKLDSQRVMEIDSLAAIINLVKQGKGKALLPMTFENKRDIVQDISKIFEVNYYTYNH
IMHH

Specific function: Regulates expression of the cell division protein ftsW, and is essential for cell viability during stationary phase [H]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 28067; Mature: 28067

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFNDLEIFITVCEEASINKAAIKLRYAQSNISQRISKLENELGVVLLFRNQKGAKATKA
CCCCCEEEEEEEECCCCCCHHHEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH
GEEFLAYSKKVLRDTETIKNKMKNNTMSILCSELLFNYLSESEEIMMSNNSINFISSGNI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCH
RKAIKKNNYDKVISFIKINDSNYRLSNVDTMKVTLYSNGSNYDKEALLINKDEFCPLRKI
HHHHHCCCHHHEEEEEEECCCCEEECCCCEEEEEEEECCCCCCCCEEEECCCCCCCEEEE
TLDNKLDSQRVMEIDSLAAIINLVKQGKGKALLPMTFENKRDIVQDISKIFEVNYYTYNH
EECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEHHC
IMHH
CCCC
>Mature Secondary Structure
MNFNDLEIFITVCEEASINKAAIKLRYAQSNISQRISKLENELGVVLLFRNQKGAKATKA
CCCCCEEEEEEEECCCCCCHHHEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH
GEEFLAYSKKVLRDTETIKNKMKNNTMSILCSELLFNYLSESEEIMMSNNSINFISSGNI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCH
RKAIKKNNYDKVISFIKINDSNYRLSNVDTMKVTLYSNGSNYDKEALLINKDEFCPLRKI
HHHHHCCCHHHEEEEEEECCCCEEECCCCEEEEEEEECCCCCCCCEEEECCCCCCCEEEE
TLDNKLDSQRVMEIDSLAAIINLVKQGKGKALLPMTFENKRDIVQDISKIFEVNYYTYNH
EECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEHHC
IMHH
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]