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The map label for this gene is yrkD [H]

Identifier: 57652417

GI number: 57652417

Start: 55981

End: 56241

Strand: Direct

Name: yrkD [H]

Synonym: SACOL0048

Alternate gene names: 57652417

Gene position: 55981-56241 (Clockwise)

Preceding gene: 57652414

Following gene: 57652418

Centisome position: 1.99

GC content: 29.12

Gene sequence:

>261_bases
TTGGAATATAATAAAAAGATGATTAATCGTATTCATCGCATACAAGGACAGCTTAATGGAGTCATTAAAATGATGGAGGA
AGAAAAAAATTGTAAAGACGTCATTAGTCAATTAAGTGCATCTAAAAGTTCTATTCAACGTTTAATGGGTATTATTATTA
GCGAGAACTTAGTAGAATGCGTCAAAATGTCTGAAGAAAATAGTGAAGATTCTCAGGCACTAATTAATGAAGCTGTTGAA
TTATTAATAAAAAGTAAATGA

Upstream 100 bases:

>100_bases
ACGAATTAGATAGTTTGTCAAATACCTATGGGGGTATTTGACAAACTAAAATTTAATCAATATGATGTAATTATTAAAAA
TGAATGTGGAGTGAAATATA

Downstream 100 bases:

>100_bases
TAAGTATAACAGTAATTATAGTAATGTTAGTTATTGGTATATTAGGAGGATTTATTTCTGGATTAGTCGGTATAGGGGGA
GCCATTGTTATTTACCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MEYNKKMINRIHRIQGQLNGVIKMMEEEKNCKDVISQLSASKSSIQRLMGIIISENLVECVKMSEENSEDSQALINEAVE
LLIKSK

Sequences:

>Translated_86_residues
MEYNKKMINRIHRIQGQLNGVIKMMEEEKNCKDVISQLSASKSSIQRLMGIIISENLVECVKMSEENSEDSQALINEAVE
LLIKSK
>Mature_86_residues
MEYNKKMINRIHRIQGQLNGVIKMMEEEKNCKDVISQLSASKSSIQRLMGIIISENLVECVKMSEENSEDSQALINEAVE
LLIKSK

Specific function: Unknown

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 9812; Mature: 9812

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYNKKMINRIHRIQGQLNGVIKMMEEEKNCKDVISQLSASKSSIQRLMGIIISENLVEC
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VKMSEENSEDSQALINEAVELLIKSK
HHHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEYNKKMINRIHRIQGQLNGVIKMMEEEKNCKDVISQLSASKSSIQRLMGIIISENLVEC
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VKMSEENSEDSQALINEAVELLIKSK
HHHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]