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The map label for this gene is yrkJ [H]

Identifier: 57652418

GI number: 57652418

Start: 56265

End: 56996

Strand: Direct

Name: yrkJ [H]

Synonym: SACOL0049

Alternate gene names: 57652418

Gene position: 56265-56996 (Clockwise)

Preceding gene: 57652417

Following gene: 57652419

Centisome position: 2.0

GC content: 29.64

Gene sequence:

>732_bases
ATGTTAGTTATTGGTATATTAGGAGGATTTATTTCTGGATTAGTCGGTATAGGGGGAGCCATTGTTATTTACCCTGCTCT
CTTATTATTACCACCATTATTTGGTTTACCTACTTATAGTGCTTATATTGCCTCAGGATTAACTTCAAGTCAGGTGTTTT
TTAGTACATTGAGTGGATCTTTAAAAGCATATAAAAATAAAAATTTTTCTAGAACGCTTATACTTAATATGGGAAGTGGA
ATGGTAATAGGTAGTATTCTAGGTGCGTTATTAGCAACTGTATTTAATAGTCAGTTTGTTAATGTAATTTATATAATTAT
TGCTTTGTTAGCTCTTATTCTAATGTTTATTAAAGTCACACCATCTACTAGTCATATTAAGTTTAATCGCGTACTTTTAA
TTACAATAGGTGGTATCATCGGTTTAGTATCTGGTATTGTAGGAGCTGGTGGAGCATTCATTATTATTCCAGTACTACTT
GTTATATTTAAATTACCAATGAATATGGTTGTTACAAATAGTATTGTAATTGCATTCATTTCTTCTATTGGAGCATTTAT
TATTAAATTATTACAGGGTTATATTCCTATCAATAGTGCAATACCGTTAATTTTAGGTAGTATACTATTTACGCCTCTAG
GCATGAAAATAGGGCAAAAAATACCTGATTCTATTCAAAAAGGGATTGTAAGTATTTTAATCGTCATTGCAATCATTAAG
TTGATATTTTAA

Upstream 100 bases:

>100_bases
AAATGTCTGAAGAAAATAGTGAAGATTCTCAGGCACTAATTAATGAAGCTGTTGAATTATTAATAAAAAGTAAATGATAA
GTATAACAGTAATTATAGTA

Downstream 100 bases:

>100_bases
AAATATGGGAGTGGGGCAACATTTATTTTGAATTTGTAGTCTCGCTCCCTAAATCAATTTATACGGTATTTAATTCAAAG
GTTATTTATTAGAATCTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MLVIGILGGFISGLVGIGGAIVIYPALLLLPPLFGLPTYSAYIASGLTSSQVFFSTLSGSLKAYKNKNFSRTLILNMGSG
MVIGSILGALLATVFNSQFVNVIYIIIALLALILMFIKVTPSTSHIKFNRVLLITIGGIIGLVSGIVGAGGAFIIIPVLL
VIFKLPMNMVVTNSIVIAFISSIGAFIIKLLQGYIPINSAIPLILGSILFTPLGMKIGQKIPDSIQKGIVSILIVIAIIK
LIF

Sequences:

>Translated_243_residues
MLVIGILGGFISGLVGIGGAIVIYPALLLLPPLFGLPTYSAYIASGLTSSQVFFSTLSGSLKAYKNKNFSRTLILNMGSG
MVIGSILGALLATVFNSQFVNVIYIIIALLALILMFIKVTPSTSHIKFNRVLLITIGGIIGLVSGIVGAGGAFIIIPVLL
VIFKLPMNMVVTNSIVIAFISSIGAFIIKLLQGYIPINSAIPLILGSILFTPLGMKIGQKIPDSIQKGIVSILIVIAIIK
LIF
>Mature_243_residues
MLVIGILGGFISGLVGIGGAIVIYPALLLLPPLFGLPTYSAYIASGLTSSQVFFSTLSGSLKAYKNKNFSRTLILNMGSG
MVIGSILGALLATVFNSQFVNVIYIIIALLALILMFIKVTPSTSHIKFNRVLLITIGGIIGLVSGIVGAGGAFIIIPVLL
VIFKLPMNMVVTNSIVIAFISSIGAFIIKLLQGYIPINSAIPLILGSILFTPLGMKIGQKIPDSIQKGIVSILIVIAIIK
LIF

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 25530; Mature: 25530

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVIGILGGFISGLVGIGGAIVIYPALLLLPPLFGLPTYSAYIASGLTSSQVFFSTLSGS
CEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHCCCCHHHHHHHHCCCHHHHHHHHHHHH
LKAYKNKNFSRTLILNMGSGMVIGSILGALLATVFNSQFVNVIYIIIALLALILMFIKVT
HHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PSTSHIKFNRVLLITIGGIIGLVSGIVGAGGAFIIIPVLLVIFKLPMNMVVTNSIVIAFI
CCCCCEEECCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
SSIGAFIIKLLQGYIPINSAIPLILGSILFTPLGMKIGQKIPDSIQKGIVSILIVIAIIK
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHH
LIF
HHC
>Mature Secondary Structure
MLVIGILGGFISGLVGIGGAIVIYPALLLLPPLFGLPTYSAYIASGLTSSQVFFSTLSGS
CEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHCCCCHHHHHHHHCCCHHHHHHHHHHHH
LKAYKNKNFSRTLILNMGSGMVIGSILGALLATVFNSQFVNVIYIIIALLALILMFIKVT
HHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PSTSHIKFNRVLLITIGGIIGLVSGIVGAGGAFIIIPVLLVIFKLPMNMVVTNSIVIAFI
CCCCCEEECCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
SSIGAFIIKLLQGYIPINSAIPLILGSILFTPLGMKIGQKIPDSIQKGIVSILIVIAIIK
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHH
LIF
HHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]