| Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
|---|---|
| Accession | NC_002951 |
| Length | 2,809,422 |
Click here to switch to the map view.
The map label for this gene is menF [H]
Identifier: 57650236
GI number: 57650236
Start: 1056672
End: 1057883
Strand: Direct
Name: menF [H]
Synonym: SACOL1051
Alternate gene names: 57650236
Gene position: 1056672-1057883 (Clockwise)
Preceding gene: 57650235
Following gene: 57650237
Centisome position: 37.61
GC content: 30.86
Gene sequence:
>1212_bases ATGCGTTTGAATGATAATCGAACGTCATATTTTGGCTACAAAGCAATTCAATTATTCAAAAATAATTCTAAAAATAAACA ATCTATTTTTAAAGACTGGGAAAAATTAAAACATAACATCACATTTATACATCCGCAATCTGAGAAACATCATCTTCGAG TTGTTGGAGGGTTCCAATTTTCAAGTCATAAATCAGATGATGAATGGCGAGAGTTTGGACTAAATCATTTTGTATTACCT GAAGTTTTAATTTCAACTGATAATAATGGGACATTTTTAACTTATACAGTTAAAAGGGAAAGTTTTACTGTTGAGGCATT GAACGATTTAATGGATTTGTTCAACAATATATCGGACATAGATGTGGACGAGCAAATTGGGGAAATTACTAGAAATGAAG ATATTTATAAAGATGACTGGCGTCAACTTGTAGTAGAAGCTATAGAATCTATTAATAATGAAGAAAAAATTGTACTAGCA CGTAGACGGTTAATAAAGTTCGATAAAGATATCAGTATTCCATATATTCTAAAGCAAGCATATTCTAAAGAAAAAAACAG TTATATATTCTTGTTAGAATCACAAGATTCTATATTCTTTTCACAAACACCTGAACAATTAATAAAGGTCAATAATAAAA TACTATCGACTAAAGCTGTAGCAGGTACAATTAAACGTTCACAAGATGAGGACGAAGATACAAAAAATGTTGAAGCATTT TTAAAAGATAATAAAAACTTAATCGAACATCGATTTGTTGTTGACAGTATTTTACATGATATTAAACCTTATATCACTGA ATTACATTATGATAAGACGCCTAAAATTCTAAAAAATGATCATTTATATCACTTGTACACTGAAATAAAGGCGCCACTGA AGGATGATTCGTATATTAGTTTAATTGATAATTTACATCCAACACCTGCTTTAGGTGGCTATCCAAAAGAATTTGCAATG GATTTTATTGAGCAGAAAGAATTTGGTACGCGAGGATTATATGGTGCACCGGTTGGCTATATAGATATATACGATGATTG TGAATTTATTGTTGCAATTCGTTCGATGCTTATTAAGAAAGCACAAGCAACTTTATTTGCTGGGTGTGGCATTGTTAAAG ATTCTGATCCAGATAGTGAATTGGCAGAAACGAACCTTAAGTTCACACCTATGATGAATGCATTAGGAGTCGATATGAAT GGGAAATCATAA
Upstream 100 bases:
>100_bases CTCAAAGGAATGGGTTTCAGTTGAAGTGAAATTATCACAGTCACTAGACCCGAGCACATTATTTCATCTCACTGACAATG AGGCAGGAGATCGCTTTTAT
Downstream 100 bases:
>100_bases AGCAGCTTTAACGAAGCAAGTTTTTACATTTGCATCTGAGTTATATGCGTACGGCGTAAGGGAAGTAGTTATCAGTCCGG GATCACGCTCAACGCCACTT
Product: isochorismate synthase family protein
Products: NA
Alternate protein names: Isochorismate mutase [H]
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MRLNDNRTSYFGYKAIQLFKNNSKNKQSIFKDWEKLKHNITFIHPQSEKHHLRVVGGFQFSSHKSDDEWREFGLNHFVLP EVLISTDNNGTFLTYTVKRESFTVEALNDLMDLFNNISDIDVDEQIGEITRNEDIYKDDWRQLVVEAIESINNEEKIVLA RRRLIKFDKDISIPYILKQAYSKEKNSYIFLLESQDSIFFSQTPEQLIKVNNKILSTKAVAGTIKRSQDEDEDTKNVEAF LKDNKNLIEHRFVVDSILHDIKPYITELHYDKTPKILKNDHLYHLYTEIKAPLKDDSYISLIDNLHPTPALGGYPKEFAM DFIEQKEFGTRGLYGAPVGYIDIYDDCEFIVAIRSMLIKKAQATLFAGCGIVKDSDPDSELAETNLKFTPMMNALGVDMN GKS
Sequences:
>Translated_403_residues MRLNDNRTSYFGYKAIQLFKNNSKNKQSIFKDWEKLKHNITFIHPQSEKHHLRVVGGFQFSSHKSDDEWREFGLNHFVLP EVLISTDNNGTFLTYTVKRESFTVEALNDLMDLFNNISDIDVDEQIGEITRNEDIYKDDWRQLVVEAIESINNEEKIVLA RRRLIKFDKDISIPYILKQAYSKEKNSYIFLLESQDSIFFSQTPEQLIKVNNKILSTKAVAGTIKRSQDEDEDTKNVEAF LKDNKNLIEHRFVVDSILHDIKPYITELHYDKTPKILKNDHLYHLYTEIKAPLKDDSYISLIDNLHPTPALGGYPKEFAM DFIEQKEFGTRGLYGAPVGYIDIYDDCEFIVAIRSMLIKKAQATLFAGCGIVKDSDPDSELAETNLKFTPMMNALGVDMN GKS >Mature_403_residues MRLNDNRTSYFGYKAIQLFKNNSKNKQSIFKDWEKLKHNITFIHPQSEKHHLRVVGGFQFSSHKSDDEWREFGLNHFVLP EVLISTDNNGTFLTYTVKRESFTVEALNDLMDLFNNISDIDVDEQIGEITRNEDIYKDDWRQLVVEAIESINNEEKIVLA RRRLIKFDKDISIPYILKQAYSKEKNSYIFLLESQDSIFFSQTPEQLIKVNNKILSTKAVAGTIKRSQDEDEDTKNVEAF LKDNKNLIEHRFVVDSILHDIKPYITELHYDKTPKILKNDHLYHLYTEIKAPLKDDSYISLIDNLHPTPALGGYPKEFAM DFIEQKEFGTRGLYGAPVGYIDIYDDCEFIVAIRSMLIKKAQATLFAGCGIVKDSDPDSELAETNLKFTPMMNALGVDMN GKS
Specific function: Siderophore biosynthesis; enterobactin biosynthesis. [C]
COG id: COG1169
COG function: function code HQ; Isochorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isochorismate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786809, Length=254, Percent_Identity=31.1023622047244, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI87082077, Length=265, Percent_Identity=29.0566037735849, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI1787518, Length=258, Percent_Identity=28.6821705426357, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1788114, Length=199, Percent_Identity=28.1407035175879, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320935, Length=209, Percent_Identity=31.1004784688995, Blast_Score=84, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR015890 - InterPro: IPR004561 [H]
Pfam domain/function: PF00425 Chorismate_bind [H]
EC number: =5.4.4.2 [H]
Molecular weight: Translated: 46619; Mature: 46619
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLNDNRTSYFGYKAIQLFKNNSKNKQSIFKDWEKLKHNITFIHPQSEKHHLRVVGGFQF CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCCCCEEEEEEEEEE SSHKSDDEWREFGLNHFVLPEVLISTDNNGTFLTYTVKRESFTVEALNDLMDLFNNISDI CCCCCCHHHHHHCCCCEECCEEEEEECCCCEEEEEEEECCCEEHHHHHHHHHHHCCCCCC DVDEQIGEITRNEDIYKDDWRQLVVEAIESINNEEKIVLARRRLIKFDKDISIPYILKQA CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH YSKEKNSYIFLLESQDSIFFSQTPEQLIKVNNKILSTKAVAGTIKRSQDEDEDTKNVEAF HCCCCCCEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LKDNKNLIEHRFVVDSILHDIKPYITELHYDKTPKILKNDHLYHLYTEIKAPLKDDSYIS HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEEHHCCCCCCCCHHH LIDNLHPTPALGGYPKEFAMDFIEQKEFGTRGLYGAPVGYIDIYDDCEFIVAIRSMLIKK HHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHH AQATLFAGCGIVKDSDPDSELAETNLKFTPMMNALGVDMNGKS HHHHHHHCCCCCCCCCCCHHHHHCCCEEEECHHHHCCCCCCCC >Mature Secondary Structure MRLNDNRTSYFGYKAIQLFKNNSKNKQSIFKDWEKLKHNITFIHPQSEKHHLRVVGGFQF CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCCCCEEEEEEEEEE SSHKSDDEWREFGLNHFVLPEVLISTDNNGTFLTYTVKRESFTVEALNDLMDLFNNISDI CCCCCCHHHHHHCCCCEECCEEEEEECCCCEEEEEEEECCCEEHHHHHHHHHHHCCCCCC DVDEQIGEITRNEDIYKDDWRQLVVEAIESINNEEKIVLARRRLIKFDKDISIPYILKQA CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH YSKEKNSYIFLLESQDSIFFSQTPEQLIKVNNKILSTKAVAGTIKRSQDEDEDTKNVEAF HCCCCCCEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LKDNKNLIEHRFVVDSILHDIKPYITELHYDKTPKILKNDHLYHLYTEIKAPLKDDSYIS HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCEEEEEEHHCCCCCCCCHHH LIDNLHPTPALGGYPKEFAMDFIEQKEFGTRGLYGAPVGYIDIYDDCEFIVAIRSMLIKK HHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHH AQATLFAGCGIVKDSDPDSELAETNLKFTPMMNALGVDMNGKS HHHHHHHCCCCCCCCCCCHHHHHCCCEEEECHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1629163; 8566759; 9387221; 9384377; 3131310 [H]