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The map label for this gene is oxaA

Identifier: 41410445

GI number: 41410445

Start: 4827263

End: 4828324

Strand: Reverse

Name: oxaA

Synonym: MAP4347c

Alternate gene names: 41410445

Gene position: 4828324-4827263 (Counterclockwise)

Preceding gene: 41410446

Following gene: 41410444

Centisome position: 99.97

GC content: 64.97

Gene sequence:

>1062_bases
GTGGATCTCTTGTTTGATTTCTTCAGCCTCGACTTCGTCTACTACCCGGTGTCGTGGATCATGTGGGTCTGGTACAAGTT
GTTCGCCGCCATGCTCGGGCCGTCGAACTTCTTCGCCTGGGCGCTGTCGGTGATGTTCTTGGTGTTCACCCTGCGGGCGC
TGCTGTACAAGCCGTTCGTGCGGCAGATCCGCACCACCCGGCAGATGCAGGAGCTGCAACCACAGATCAAGGCGCTGCAG
AAGAAGTACGGCAAGGACCGGCAGCGCATGGCGTTGGAGATGCAGAAGCTGCAGCGCGAGCACGGGTTCAATCCGATCCT
GGGCTGCCTGCCGATGCTGGCCCAGATCCCGGTGTTCCTCGGTCTGTATCACGTGCTGCGGTCGTTCAACCGAACCACCG
GCGGGTTCGGGCAACCGCACCTGTCGGTGGTGCAGAACCGGCTGACCGGAAACTACGTCTTCACCCCGACCGATGTGGGG
CACTTCCTGGACGCCAATTTGTTCGGCGCACCGATCGGCGCGTTCATGACCCAGCGCACCGGGCTGGACGCGTTCACGTA
TTTCAGCCGCCCGGCGGTGATCGCGGTCGGCCTGCCGGTGATGATCCTGGCCGGCGTCGCAACGTACTTCAACAGCCGGG
CGTCGGTGGCACGCCAAAGCCCCGAGGCGGCCGCCAACCCGCAGACGGCGATGATGAACAAACTTGCGCTGTACGTGTTT
CCGCTCGGCGTGGTGGTCGGTGGGCCGTTCCTGCCGCTGGCCATCATCCTGTACTGGTTCGCCAACAACATCTGGACGTT
CGGTCAGCAGCACTACGTGTTCGGCATGATCGAAAAGGAAGACGAAGCCAAGAAGCAGGAAGCGATTCAGCGCCGCGCGG
CCAATGCCCCGGCGCCGGGCGCCAAGCCGAAGCGGAACCTGAAGGCGGGCGCGGGCAACGGTGTGGATGCAGACGCGGCA
CAGCCGGACGCCGGCGCCACCGAGGGCCAAGCCGGCGGGGGCAGCGACGCGCCGAGCCGCACCCCGCGTCCCGGGGCGCG
ACCGAAGAAGCGCAAACGCTGA

Upstream 100 bases:

>100_bases
CACCAGGGCGGCTGGGACCCGATCCCCGAGCGCCCCGGATGCCGGGTGAATTGCCAAGATGCCAGCGACGCTTGGGCGGT
CCGAGCGACGCGAGGGGAGA

Downstream 100 bases:

>100_bases
TCGGGGCGGACAAGCTATCGGGGCCGCCGCGGCAGGGCGACCCTAACTGGGCTGCGGCCCATGGATGAGGGAGATAAAGA
CATGGCAGACGCCGACACCA

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MDLLFDFFSLDFVYYPVSWIMWVWYKLFAAMLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQMQELQPQIKALQ
KKYGKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRSFNRTTGGFGQPHLSVVQNRLTGNYVFTPTDVG
HFLDANLFGAPIGAFMTQRTGLDAFTYFSRPAVIAVGLPVMILAGVATYFNSRASVARQSPEAAANPQTAMMNKLALYVF
PLGVVVGGPFLPLAIILYWFANNIWTFGQQHYVFGMIEKEDEAKKQEAIQRRAANAPAPGAKPKRNLKAGAGNGVDADAA
QPDAGATEGQAGGGSDAPSRTPRPGARPKKRKR

Sequences:

>Translated_353_residues
MDLLFDFFSLDFVYYPVSWIMWVWYKLFAAMLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQMQELQPQIKALQ
KKYGKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRSFNRTTGGFGQPHLSVVQNRLTGNYVFTPTDVG
HFLDANLFGAPIGAFMTQRTGLDAFTYFSRPAVIAVGLPVMILAGVATYFNSRASVARQSPEAAANPQTAMMNKLALYVF
PLGVVVGGPFLPLAIILYWFANNIWTFGQQHYVFGMIEKEDEAKKQEAIQRRAANAPAPGAKPKRNLKAGAGNGVDADAA
QPDAGATEGQAGGGSDAPSRTPRPGARPKKRKR
>Mature_353_residues
MDLLFDFFSLDFVYYPVSWIMWVWYKLFAAMLGPSNFFAWALSVMFLVFTLRALLYKPFVRQIRTTRQMQELQPQIKALQ
KKYGKDRQRMALEMQKLQREHGFNPILGCLPMLAQIPVFLGLYHVLRSFNRTTGGFGQPHLSVVQNRLTGNYVFTPTDVG
HFLDANLFGAPIGAFMTQRTGLDAFTYFSRPAVIAVGLPVMILAGVATYFNSRASVARQSPEAAANPQTAMMNKLALYVF
PLGVVVGGPFLPLAIILYWFANNIWTFGQQHYVFGMIEKEDEAKKQEAIQRRAANAPAPGAKPKRNLKAGAGNGVDADAA
QPDAGATEGQAGGGSDAPSRTPRPGARPKKRKR

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily

Homologues:

Organism=Escherichia coli, GI1790140, Length=262, Percent_Identity=24.0458015267176, Blast_Score=85, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OXAA_MYCPA (Q9L7M1)

Other databases:

- EMBL:   AF222789
- EMBL:   AE016958
- RefSeq:   NP_963281.1
- EnsemblBacteria:   EBMYCT00000039995
- GeneID:   2719690
- GenomeReviews:   AE016958_GR
- KEGG:   mpa:MAP4347c
- NMPDR:   fig|262316.1.peg.4347
- GeneTree:   EBGT00050000017449
- HOGENOM:   HBG560622
- OMA:   FIGLFHV
- ProtClustDB:   PRK03449
- HAMAP:   MF_01810
- InterPro:   IPR001708
- PANTHER:   PTHR12428
- TIGRFAMs:   TIGR03592

Pfam domain/function: PF02096 60KD_IMP

EC number: NA

Molecular weight: Translated: 39247; Mature: 39247

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12aa2d18)-; HASH(0x13f89cd4)-; HASH(0x145236b8)-; HASH(0x132d5978)-; HASH(0x1390d914)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
>Mature Secondary Structure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CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA