| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is parA
Identifier: 41410441
GI number: 41410441
Start: 4823681
End: 4824667
Strand: Reverse
Name: parA
Synonym: MAP4343c
Alternate gene names: 41410441
Gene position: 4824667-4823681 (Counterclockwise)
Preceding gene: 41410442
Following gene: 41410440
Centisome position: 99.89
GC content: 71.02
Gene sequence:
>987_bases ATGACGCAGCCGTTACGTAAGAAGGGCGGCCTCGGCCGGGGCCTGGCTTCGCTGATTCCCACCGGCCCCGCCGAGGGCGA CGCCGGCCCGGCGACGCTGGGTCCGCGGATGGGCGACGCCGCCGCGGACGTCTTGATCGGGGGACCGGCGCCGCAGGAGG CGTCGCCCGTGGGTGCGGTCTACCGCGAGATCTCGCCGGCCGACATCGAACGCAACCCCCGACAGCCGCGGCAGGTCTTC GACGAGGAGGCGCTCGCCGAACTGGTGCACTCCATCCGCGAGTTCGGCCTTTTGCAGCCGATCGTGGTGCGGGCCATCAA GGAGTCGGCCAGCGGCGCCCGCTACCAGATCGTGATGGGGGAGCGGCGCTGGCGTGCGGCCCAGGAGGCCGGGCTGGCCA CCATTCCCGCCATCGTGCGCGAGACGGGTGACGACAACCTGCTGCGAGACGCGTTGTTGGAGAACATCCACCGGGTGCAG TTGAACCCCCTGGAAGAGGCGGCCGCCTACCAACAGCTGCTCGACGAATTCGGCGTCACCCACGACGAACTCGCCGCCCG CATCGGCCGGTCCCGGCCGCTGATCACCAACATGATCCGGTTGCTCAAGCTGCCGATCGCGGTGCAGCGGCGGGTGGCCG CCGGGGTGCTGTCCGCCGGTCACGCCCGGGCGCTGCTGTCGCTGGAAGCCGGCCCCGAGGCGCAGGAGGAGCTCGCCACC CGGATCGTCGCCGAGGGTCTGTCGGTGCGCGCCACCGAGGAGGCGGTCACCCTGGCCAACCGGGCCGGCACGACGACGCC GACGCCGCCGCGGCGCAAGCCGATCCAGATGCCCGGCCTGCAAGACGTTGCTGACCGGCTCTCCACGGCCTTCGACACGC GGGTCACGGTCAGTCTGGGCAAACGCAAGGGCAAGATCGTGGTCGAGTTCGGGTCGGTGGACGATCTGCAGCGGATCATC GACGTGATGGCCCCGCCGAAACCGTGA
Upstream 100 bases:
>100_bases ACCCCGGGTCGCGCGGGGCGATGAGCTATCTCGATGCGAGCCGCGAACTCGCCGAGCGTGATTGACCACCACCCGTGAAG GCATCCGTGAAGGGACGACC
Downstream 100 bases:
>100_bases CCTAGGACCCGGTGTAATTACGTCACTGTGACGCCGCGATCGGTGCGGGCCCGAATCCGCCCGGCCGGTGCCGGGTGGCT CGGCGAAATCGCATGTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MTQPLRKKGGLGRGLASLIPTGPAEGDAGPATLGPRMGDAAADVLIGGPAPQEASPVGAVYREISPADIERNPRQPRQVF DEEALAELVHSIREFGLLQPIVVRAIKESASGARYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQ LNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIAVQRRVAAGVLSAGHARALLSLEAGPEAQEELAT RIVAEGLSVRATEEAVTLANRAGTTTPTPPRRKPIQMPGLQDVADRLSTAFDTRVTVSLGKRKGKIVVEFGSVDDLQRII DVMAPPKP
Sequences:
>Translated_328_residues MTQPLRKKGGLGRGLASLIPTGPAEGDAGPATLGPRMGDAAADVLIGGPAPQEASPVGAVYREISPADIERNPRQPRQVF DEEALAELVHSIREFGLLQPIVVRAIKESASGARYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQ LNPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIAVQRRVAAGVLSAGHARALLSLEAGPEAQEELAT RIVAEGLSVRATEEAVTLANRAGTTTPTPPRRKPIQMPGLQDVADRLSTAFDTRVTVSLGKRKGKIVVEFGSVDDLQRII DVMAPPKP >Mature_327_residues TQPLRKKGGLGRGLASLIPTGPAEGDAGPATLGPRMGDAAADVLIGGPAPQEASPVGAVYREISPADIERNPRQPRQVFD EEALAELVHSIREFGLLQPIVVRAIKESASGARYQIVMGERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQL NPLEEAAAYQQLLDEFGVTHDELAARIGRSRPLITNMIRLLKLPIAVQRRVAAGVLSAGHARALLSLEAGPEAQEELATR IVAEGLSVRATEEAVTLANRAGTTTPTPPRRKPIQMPGLQDVADRLSTAFDTRVTVSLGKRKGKIVVEFGSVDDLQRIID VMAPPKP
Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]
COG id: COG1475
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004437 - InterPro: IPR003115 - InterPro: IPR013741 [H]
Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]
EC number: NA
Molecular weight: Translated: 35200; Mature: 35069
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPLRKKGGLGRGLASLIPTGPAEGDAGPATLGPRMGDAAADVLIGGPAPQEASPVGAV CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCCCHHHHH YREISPADIERNPRQPRQVFDEEALAELVHSIREFGLLQPIVVRAIKESASGARYQIVMG HHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEC ERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVT CHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC HDELAARIGRSRPLITNMIRLLKLPIAVQRRVAAGVLSAGHARALLSLEAGPEAQEELAT HHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHEEEEECCCCCHHHHHHH RIVAEGLSVRATEEAVTLANRAGTTTPTPPRRKPIQMPGLQDVADRLSTAFDTRVTVSLG HHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEC KRKGKIVVEFGSVDDLQRIIDVMAPPKP CCCCEEEEEECCHHHHHHHHHHHCCCCC >Mature Secondary Structure TQPLRKKGGLGRGLASLIPTGPAEGDAGPATLGPRMGDAAADVLIGGPAPQEASPVGAV CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCCCHHHHH YREISPADIERNPRQPRQVFDEEALAELVHSIREFGLLQPIVVRAIKESASGARYQIVMG HHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEC ERRWRAAQEAGLATIPAIVRETGDDNLLRDALLENIHRVQLNPLEEAAAYQQLLDEFGVT CHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC HDELAARIGRSRPLITNMIRLLKLPIAVQRRVAAGVLSAGHARALLSLEAGPEAQEELAT HHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHEEEEECCCCCHHHHHHH RIVAEGLSVRATEEAVTLANRAGTTTPTPPRRKPIQMPGLQDVADRLSTAFDTRVTVSLG HHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEC KRKGKIVVEFGSVDDLQRIIDVMAPPKP CCCCEEEEEECCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]