| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410440
Identifier: 41410440
GI number: 41410440
Start: 4822663
End: 4823415
Strand: Reverse
Name: 41410440
Synonym: MAP4342c
Alternate gene names: NA
Gene position: 4823415-4822663 (Counterclockwise)
Preceding gene: 41410441
Following gene: 41410430
Centisome position: 99.87
GC content: 69.19
Gene sequence:
>753_bases GTGTCCGCCCGAATCACGCCGCTGCGGCTCGAGGCCTTCGAGCAGCTTCCCAAACACGCCCGCCGGTGCGTCTTCTGGGA GGTCGATCCCGCCGTCCTCGGTAACCACGACCACCTCGCCGACGCCGAGTTCGAAAAGGAAGCGTGGCTGTCGATGGTGA TGCTGGAGTGGGGGTGCTGCGGTCAGGTGGCGACGGCGATCCCCGACGAGCGAAGCCAGGCCGAGCCGCCGTGTCTGGGC TATGTGTTCTATGCCCCGCCGCGAGCGGTGCCGCGGGCCCAACGTTTTCCGACCGGACCGGTGTCCGCGGACGCGGTGCT GTTGACGTCCATGGGAATCGAACCCGGGCCGGCCGCCGACGACCTGCCGCACGCCTTGCTCGCCCGGGTGATTGACGAAC TGGTCCGTCGCGGGGTGCGCGCCCTCGAGGCGTTCGGCCGCACCCCGGCCGCGTCGGAGCTACAGGATCCGCGCCTGGTG GGTCCCGATCTGCGTCCGGTGTTGGAGGCCGTCGGTGATTGCTCGGTGGACCACTGCGTGATGGACGCGGAGTTCCTCAA AGACGCGGGATTCGTTGTGGTAGCGCCACATACGTACTTCCCGCGGTTACGGCTCGAGCTCGACAAGGGTCTCGGGTGGA AGGCCGAAGTCGAGGCGGCGCTGGAGCGTCTGCTGGAGAGCGCCCGCCTCGAGCAGCCGGTCGGGGCCGCGTCCACGCCG GCGAACGCATTGAAAACCGCCCCGCCCGACTAG
Upstream 100 bases:
>100_bases GGCGGCCGGGCCAAAGCTAGCCCGATCATCGCCACCTCTCCTATCCTGGAGGGGTTGCCGGTGCAGATCGCTGCAGTACC GCACAGGAGCCAGGAGGCTA
Downstream 100 bases:
>100_bases CGGCCGGTGCGGTTCAGGAACCGCCCATCTGGCTGGTGCGCTCCACCGACAATTCGTGGGCCAGTAACTCGGCGAAAGTG AATGTGCCTGTGGGACGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: GNAT Family Acetyltransferase; Acetyltransferase Family Protein
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MSARITPLRLEAFEQLPKHARRCVFWEVDPAVLGNHDHLADAEFEKEAWLSMVMLEWGCCGQVATAIPDERSQAEPPCLG YVFYAPPRAVPRAQRFPTGPVSADAVLLTSMGIEPGPAADDLPHALLARVIDELVRRGVRALEAFGRTPAASELQDPRLV GPDLRPVLEAVGDCSVDHCVMDAEFLKDAGFVVVAPHTYFPRLRLELDKGLGWKAEVEAALERLLESARLEQPVGAASTP ANALKTAPPD
Sequences:
>Translated_250_residues MSARITPLRLEAFEQLPKHARRCVFWEVDPAVLGNHDHLADAEFEKEAWLSMVMLEWGCCGQVATAIPDERSQAEPPCLG YVFYAPPRAVPRAQRFPTGPVSADAVLLTSMGIEPGPAADDLPHALLARVIDELVRRGVRALEAFGRTPAASELQDPRLV GPDLRPVLEAVGDCSVDHCVMDAEFLKDAGFVVVAPHTYFPRLRLELDKGLGWKAEVEAALERLLESARLEQPVGAASTP ANALKTAPPD >Mature_249_residues SARITPLRLEAFEQLPKHARRCVFWEVDPAVLGNHDHLADAEFEKEAWLSMVMLEWGCCGQVATAIPDERSQAEPPCLGY VFYAPPRAVPRAQRFPTGPVSADAVLLTSMGIEPGPAADDLPHALLARVIDELVRRGVRALEAFGRTPAASELQDPRLVG PDLRPVLEAVGDCSVDHCVMDAEFLKDAGFVVVAPHTYFPRLRLELDKGLGWKAEVEAALERLLESARLEQPVGAASTPA NALKTAPPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27214; Mature: 27083
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARITPLRLEAFEQLPKHARRCVFWEVDPAVLGNHDHLADAEFEKEAWLSMVMLEWGCC CCCCCCHHHHHHHHHHHHHHHHEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC GQVATAIPDERSQAEPPCLGYVFYAPPRAVPRAQRFPTGPVSADAVLLTSMGIEPGPAAD HHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC DLPHALLARVIDELVRRGVRALEAFGRTPAASELQDPRLVGPDLRPVLEAVGDCSVDHCV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHCCCCHHHHH MDAEFLKDAGFVVVAPHTYFPRLRLELDKGLGWKAEVEAALERLLESARLEQPVGAASTP HHHHHHHCCCEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC ANALKTAPPD HHHCCCCCCC >Mature Secondary Structure SARITPLRLEAFEQLPKHARRCVFWEVDPAVLGNHDHLADAEFEKEAWLSMVMLEWGCC CCCCCHHHHHHHHHHHHHHHHEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC GQVATAIPDERSQAEPPCLGYVFYAPPRAVPRAQRFPTGPVSADAVLLTSMGIEPGPAAD HHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC DLPHALLARVIDELVRRGVRALEAFGRTPAASELQDPRLVGPDLRPVLEAVGDCSVDHCV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHCCCCHHHHH MDAEFLKDAGFVVVAPHTYFPRLRLELDKGLGWKAEVEAALERLLESARLEQPVGAASTP HHHHHHHCCCEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC ANALKTAPPD HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA