Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41410440

Identifier: 41410440

GI number: 41410440

Start: 4822663

End: 4823415

Strand: Reverse

Name: 41410440

Synonym: MAP4342c

Alternate gene names: NA

Gene position: 4823415-4822663 (Counterclockwise)

Preceding gene: 41410441

Following gene: 41410430

Centisome position: 99.87

GC content: 69.19

Gene sequence:

>753_bases
GTGTCCGCCCGAATCACGCCGCTGCGGCTCGAGGCCTTCGAGCAGCTTCCCAAACACGCCCGCCGGTGCGTCTTCTGGGA
GGTCGATCCCGCCGTCCTCGGTAACCACGACCACCTCGCCGACGCCGAGTTCGAAAAGGAAGCGTGGCTGTCGATGGTGA
TGCTGGAGTGGGGGTGCTGCGGTCAGGTGGCGACGGCGATCCCCGACGAGCGAAGCCAGGCCGAGCCGCCGTGTCTGGGC
TATGTGTTCTATGCCCCGCCGCGAGCGGTGCCGCGGGCCCAACGTTTTCCGACCGGACCGGTGTCCGCGGACGCGGTGCT
GTTGACGTCCATGGGAATCGAACCCGGGCCGGCCGCCGACGACCTGCCGCACGCCTTGCTCGCCCGGGTGATTGACGAAC
TGGTCCGTCGCGGGGTGCGCGCCCTCGAGGCGTTCGGCCGCACCCCGGCCGCGTCGGAGCTACAGGATCCGCGCCTGGTG
GGTCCCGATCTGCGTCCGGTGTTGGAGGCCGTCGGTGATTGCTCGGTGGACCACTGCGTGATGGACGCGGAGTTCCTCAA
AGACGCGGGATTCGTTGTGGTAGCGCCACATACGTACTTCCCGCGGTTACGGCTCGAGCTCGACAAGGGTCTCGGGTGGA
AGGCCGAAGTCGAGGCGGCGCTGGAGCGTCTGCTGGAGAGCGCCCGCCTCGAGCAGCCGGTCGGGGCCGCGTCCACGCCG
GCGAACGCATTGAAAACCGCCCCGCCCGACTAG

Upstream 100 bases:

>100_bases
GGCGGCCGGGCCAAAGCTAGCCCGATCATCGCCACCTCTCCTATCCTGGAGGGGTTGCCGGTGCAGATCGCTGCAGTACC
GCACAGGAGCCAGGAGGCTA

Downstream 100 bases:

>100_bases
CGGCCGGTGCGGTTCAGGAACCGCCCATCTGGCTGGTGCGCTCCACCGACAATTCGTGGGCCAGTAACTCGGCGAAAGTG
AATGTGCCTGTGGGACGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: GNAT Family Acetyltransferase; Acetyltransferase Family Protein

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSARITPLRLEAFEQLPKHARRCVFWEVDPAVLGNHDHLADAEFEKEAWLSMVMLEWGCCGQVATAIPDERSQAEPPCLG
YVFYAPPRAVPRAQRFPTGPVSADAVLLTSMGIEPGPAADDLPHALLARVIDELVRRGVRALEAFGRTPAASELQDPRLV
GPDLRPVLEAVGDCSVDHCVMDAEFLKDAGFVVVAPHTYFPRLRLELDKGLGWKAEVEAALERLLESARLEQPVGAASTP
ANALKTAPPD

Sequences:

>Translated_250_residues
MSARITPLRLEAFEQLPKHARRCVFWEVDPAVLGNHDHLADAEFEKEAWLSMVMLEWGCCGQVATAIPDERSQAEPPCLG
YVFYAPPRAVPRAQRFPTGPVSADAVLLTSMGIEPGPAADDLPHALLARVIDELVRRGVRALEAFGRTPAASELQDPRLV
GPDLRPVLEAVGDCSVDHCVMDAEFLKDAGFVVVAPHTYFPRLRLELDKGLGWKAEVEAALERLLESARLEQPVGAASTP
ANALKTAPPD
>Mature_249_residues
SARITPLRLEAFEQLPKHARRCVFWEVDPAVLGNHDHLADAEFEKEAWLSMVMLEWGCCGQVATAIPDERSQAEPPCLGY
VFYAPPRAVPRAQRFPTGPVSADAVLLTSMGIEPGPAADDLPHALLARVIDELVRRGVRALEAFGRTPAASELQDPRLVG
PDLRPVLEAVGDCSVDHCVMDAEFLKDAGFVVVAPHTYFPRLRLELDKGLGWKAEVEAALERLLESARLEQPVGAASTPA
NALKTAPPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27214; Mature: 27083

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARITPLRLEAFEQLPKHARRCVFWEVDPAVLGNHDHLADAEFEKEAWLSMVMLEWGCC
CCCCCCHHHHHHHHHHHHHHHHEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
GQVATAIPDERSQAEPPCLGYVFYAPPRAVPRAQRFPTGPVSADAVLLTSMGIEPGPAAD
HHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC
DLPHALLARVIDELVRRGVRALEAFGRTPAASELQDPRLVGPDLRPVLEAVGDCSVDHCV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHCCCCHHHHH
MDAEFLKDAGFVVVAPHTYFPRLRLELDKGLGWKAEVEAALERLLESARLEQPVGAASTP
HHHHHHHCCCEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
ANALKTAPPD
HHHCCCCCCC
>Mature Secondary Structure 
SARITPLRLEAFEQLPKHARRCVFWEVDPAVLGNHDHLADAEFEKEAWLSMVMLEWGCC
CCCCCHHHHHHHHHHHHHHHHEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
GQVATAIPDERSQAEPPCLGYVFYAPPRAVPRAQRFPTGPVSADAVLLTSMGIEPGPAAD
HHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC
DLPHALLARVIDELVRRGVRALEAFGRTPAASELQDPRLVGPDLRPVLEAVGDCSVDHCV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHCCCCHHHHH
MDAEFLKDAGFVVVAPHTYFPRLRLELDKGLGWKAEVEAALERLLESARLEQPVGAASTP
HHHHHHHCCCEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
ANALKTAPPD
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA