Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41410431

Identifier: 41410431

GI number: 41410431

Start: 4809330

End: 4810958

Strand: Direct

Name: 41410431

Synonym: MAP4333

Alternate gene names: NA

Gene position: 4809330-4810958 (Clockwise)

Preceding gene: 41410418

Following gene: 41410432

Centisome position: 99.58

GC content: 60.1

Gene sequence:

>1629_bases
GTGCATCTCCGATACATAAGCAAGGCCGCACTGATTATGTTCGCGGGCGGAGACCCGTGGAAGATCAACGCCACACTGCA
GAGCGGCCGGCCGGCCCAGATCTCGAACCTTGCAAAAGCGTTTCATGACGCCGGACGATCCACGGGAGAAGCCGAAGCCG
CGTTCAACCTGGCGCGGGGTCGCTTCGAGCAGGCTTGGACACACGAGAACGACGAGAATCCGATCAACGGCTCGGCCGAG
GTTCAACGGACCACGACCTCACTCAGGGTACAAGCAGCTCAATTACCGAAAATCGGAGCCGATCTGGAGAAGGTCGCGGC
CGCACTGGCCGAGGCCCAACGATCGGGCAGGGGCGAGATTTCCACGCTCGAAGGCGCGCTGCAAGATCTCGACAATCAAG
TCGGTGAGGCGGTCGAGCTGGAGAAGAACCCTCAGTTGACGGCTTCGGAGAGGCAGTTGCTGGATCACTACATCGACGGA
CTCGAGAAGCATGCGATCGATGACACCAAGGCATCAGTAGCCAATCTGACGCGAATCCGCGATCAATATTCTCAGCAGCT
GCACACTTCTATGGACAACCTGCGTGAGCAGGACAGCTACGACCCGCCAATCCAGGCATTTGACGGCAACGTTCCGGAAT
CGCCCTCGCAGGACCAACGTCGTCACAACCAGATCGAGGCCTTCAAACAGGTCTTTGGCCGTGAACCATCTTCGGCCGCA
GACTGGGAGACCGCTGCCGCGCTGGATTCGCAGACCTATGACTCCAAGTTCAACGGCGCCAAATCGGAGATCCGGGTGGT
CAGGATCCGCCCGGTACCCGGGCAGGGAGTGGTCCGTGTCTCGCAGTGGATCGAACAACGCGATGTGACGAGTTCCCTCA
CTGGAAATCGGGACCTTGGTAACAATCGTGGGGCCGATCAACATTTTGACCCCGAGGACACCAAAGTAACGACCTACATC
GACTACGAAAACGGGCTCGTGATCCTGCGTCAGAATCCCTCCGTCGAGGAGACTCCCACCGGGGCGCCGGGTACGGTCAA
GGTCGGCACGCCGAAAGGCAGCGTGACTCAGTTAGCTGACGGGTCGGTTCGGATCAAATACGACGCGGGCAATCCCTTCG
CGCCAAGCATTACCGCTGATACGAACGGCCCGTTTGCGGGCCACACCATCACTGTAAACGGTGACCTAGCATTCACCCCG
GGACCGGAAGGCGTCCACGTGAATGGCACGCGCACTGATTATCCCTCCCTCGAGGCTTATCAGGACTTTCCAGGTGGCAG
TACCCGCACGTTACTAATCGACCCAGCGCAGTCAACTAGCTCGGTGGGACCGATGTTCAACCTTCCGTTCCACCACGACG
TCGGCCCATTGGGTGGTAGAGCATTCGCGCCGTTTGACAGTGGGGGTTGGAACCTCAAATACGACGTGCCAGCGCCGCTG
CCCGCGACGGAGTTCGGCCCGGTTACCCGTGCCCCGTCGATTCCTCTGCTGCCAAGCGGAGTAGAGGTCCGGCCTGATCG
CTTACTGACAGGAAAGCTACTCCGATGCCTTCGTTCACCCGCGCAACACCACTCGACGCCGGCGCCTGGCGCACAGCAAC
CTGGTCGGCACCCCTTGTCGTCCAACTGA

Upstream 100 bases:

>100_bases
CGGTGTGAGGAGCCTCGCACGGGATCAATGGTGAATTGACCCGGCGCGGAGCGTCAGTAGCCTTACGCGCAGCGGAAAGG
GTGAACGGCGGGACGTTGCG

Downstream 100 bases:

>100_bases
TATTGGCAATGCTGCTTGTCGCCATGTGGTTGCTGGGCAAGTGGCCGTTCGAAACGCATAGTGCGTACGCCGGTGAACGA
ACATGGATGCTGACCTCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MHLRYISKAALIMFAGGDPWKINATLQSGRPAQISNLAKAFHDAGRSTGEAEAAFNLARGRFEQAWTHENDENPINGSAE
VQRTTTSLRVQAAQLPKIGADLEKVAAALAEAQRSGRGEISTLEGALQDLDNQVGEAVELEKNPQLTASERQLLDHYIDG
LEKHAIDDTKASVANLTRIRDQYSQQLHTSMDNLREQDSYDPPIQAFDGNVPESPSQDQRRHNQIEAFKQVFGREPSSAA
DWETAAALDSQTYDSKFNGAKSEIRVVRIRPVPGQGVVRVSQWIEQRDVTSSLTGNRDLGNNRGADQHFDPEDTKVTTYI
DYENGLVILRQNPSVEETPTGAPGTVKVGTPKGSVTQLADGSVRIKYDAGNPFAPSITADTNGPFAGHTITVNGDLAFTP
GPEGVHVNGTRTDYPSLEAYQDFPGGSTRTLLIDPAQSTSSVGPMFNLPFHHDVGPLGGRAFAPFDSGGWNLKYDVPAPL
PATEFGPVTRAPSIPLLPSGVEVRPDRLLTGKLLRCLRSPAQHHSTPAPGAQQPGRHPLSSN

Sequences:

>Translated_542_residues
MHLRYISKAALIMFAGGDPWKINATLQSGRPAQISNLAKAFHDAGRSTGEAEAAFNLARGRFEQAWTHENDENPINGSAE
VQRTTTSLRVQAAQLPKIGADLEKVAAALAEAQRSGRGEISTLEGALQDLDNQVGEAVELEKNPQLTASERQLLDHYIDG
LEKHAIDDTKASVANLTRIRDQYSQQLHTSMDNLREQDSYDPPIQAFDGNVPESPSQDQRRHNQIEAFKQVFGREPSSAA
DWETAAALDSQTYDSKFNGAKSEIRVVRIRPVPGQGVVRVSQWIEQRDVTSSLTGNRDLGNNRGADQHFDPEDTKVTTYI
DYENGLVILRQNPSVEETPTGAPGTVKVGTPKGSVTQLADGSVRIKYDAGNPFAPSITADTNGPFAGHTITVNGDLAFTP
GPEGVHVNGTRTDYPSLEAYQDFPGGSTRTLLIDPAQSTSSVGPMFNLPFHHDVGPLGGRAFAPFDSGGWNLKYDVPAPL
PATEFGPVTRAPSIPLLPSGVEVRPDRLLTGKLLRCLRSPAQHHSTPAPGAQQPGRHPLSSN
>Mature_542_residues
MHLRYISKAALIMFAGGDPWKINATLQSGRPAQISNLAKAFHDAGRSTGEAEAAFNLARGRFEQAWTHENDENPINGSAE
VQRTTTSLRVQAAQLPKIGADLEKVAAALAEAQRSGRGEISTLEGALQDLDNQVGEAVELEKNPQLTASERQLLDHYIDG
LEKHAIDDTKASVANLTRIRDQYSQQLHTSMDNLREQDSYDPPIQAFDGNVPESPSQDQRRHNQIEAFKQVFGREPSSAA
DWETAAALDSQTYDSKFNGAKSEIRVVRIRPVPGQGVVRVSQWIEQRDVTSSLTGNRDLGNNRGADQHFDPEDTKVTTYI
DYENGLVILRQNPSVEETPTGAPGTVKVGTPKGSVTQLADGSVRIKYDAGNPFAPSITADTNGPFAGHTITVNGDLAFTP
GPEGVHVNGTRTDYPSLEAYQDFPGGSTRTLLIDPAQSTSSVGPMFNLPFHHDVGPLGGRAFAPFDSGGWNLKYDVPAPL
PATEFGPVTRAPSIPLLPSGVEVRPDRLLTGKLLRCLRSPAQHHSTPAPGAQQPGRHPLSSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010427 [H]

Pfam domain/function: PF06259 DUF1023 [H]

EC number: NA

Molecular weight: Translated: 58588; Mature: 58588

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLRYISKAALIMFAGGDPWKINATLQSGRPAQISNLAKAFHDAGRSTGEAEAAFNLARG
CCCCEECCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RFEQAWTHENDENPINGSAEVQRTTTSLRVQAAQLPKIGADLEKVAAALAEAQRSGRGEI
HHHHHHCCCCCCCCCCCCCEEEEEHHHHEEEHHHCCCCCCCHHHHHHHHHHHHHCCCCCH
STLEGALQDLDNQVGEAVELEKNPQLTASERQLLDHYIDGLEKHAIDDTKASVANLTRIR
HHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
DQYSQQLHTSMDNLREQDSYDPPIQAFDGNVPESPSQDQRRHNQIEAFKQVFGREPSSAA
HHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
DWETAAALDSQTYDSKFNGAKSEIRVVRIRPVPGQGVVRVSQWIEQRDVTSSLTGNRDLG
CCHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCC
NNRGADQHFDPEDTKVTTYIDYENGLVILRQNPSVEETPTGAPGTVKVGTPKGSVTQLAD
CCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEECC
GSVRIKYDAGNPFAPSITADTNGPFAGHTITVNGDLAFTPGPEGVHVNGTRTDYPSLEAY
CCEEEEECCCCCCCCEEECCCCCCCCCCEEEECCEEEECCCCCCEEECCCCCCCCCCHHH
QDFPGGSTRTLLIDPAQSTSSVGPMFNLPFHHDVGPLGGRAFAPFDSGGWNLKYDVPAPL
HCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEECCCCCCCCEEEECCCCCC
PATEFGPVTRAPSIPLLPSGVEVRPDRLLTGKLLRCLRSPAQHHSTPAPGAQQPGRHPLS
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCC
SN
CC
>Mature Secondary Structure
MHLRYISKAALIMFAGGDPWKINATLQSGRPAQISNLAKAFHDAGRSTGEAEAAFNLARG
CCCCEECCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RFEQAWTHENDENPINGSAEVQRTTTSLRVQAAQLPKIGADLEKVAAALAEAQRSGRGEI
HHHHHHCCCCCCCCCCCCCEEEEEHHHHEEEHHHCCCCCCCHHHHHHHHHHHHHCCCCCH
STLEGALQDLDNQVGEAVELEKNPQLTASERQLLDHYIDGLEKHAIDDTKASVANLTRIR
HHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
DQYSQQLHTSMDNLREQDSYDPPIQAFDGNVPESPSQDQRRHNQIEAFKQVFGREPSSAA
HHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
DWETAAALDSQTYDSKFNGAKSEIRVVRIRPVPGQGVVRVSQWIEQRDVTSSLTGNRDLG
CCHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCC
NNRGADQHFDPEDTKVTTYIDYENGLVILRQNPSVEETPTGAPGTVKVGTPKGSVTQLAD
CCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEECC
GSVRIKYDAGNPFAPSITADTNGPFAGHTITVNGDLAFTPGPEGVHVNGTRTDYPSLEAY
CCEEEEECCCCCCCCEEECCCCCCCCCCEEEECCEEEECCCCCCEEECCCCCCCCCCHHH
QDFPGGSTRTLLIDPAQSTSSVGPMFNLPFHHDVGPLGGRAFAPFDSGGWNLKYDVPAPL
HCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEECCCCCCCCEEEECCCCCC
PATEFGPVTRAPSIPLLPSGVEVRPDRLLTGKLLRCLRSPAQHHSTPAPGAQQPGRHPLS
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCC
SN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]