| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410431
Identifier: 41410431
GI number: 41410431
Start: 4809330
End: 4810958
Strand: Direct
Name: 41410431
Synonym: MAP4333
Alternate gene names: NA
Gene position: 4809330-4810958 (Clockwise)
Preceding gene: 41410418
Following gene: 41410432
Centisome position: 99.58
GC content: 60.1
Gene sequence:
>1629_bases GTGCATCTCCGATACATAAGCAAGGCCGCACTGATTATGTTCGCGGGCGGAGACCCGTGGAAGATCAACGCCACACTGCA GAGCGGCCGGCCGGCCCAGATCTCGAACCTTGCAAAAGCGTTTCATGACGCCGGACGATCCACGGGAGAAGCCGAAGCCG CGTTCAACCTGGCGCGGGGTCGCTTCGAGCAGGCTTGGACACACGAGAACGACGAGAATCCGATCAACGGCTCGGCCGAG GTTCAACGGACCACGACCTCACTCAGGGTACAAGCAGCTCAATTACCGAAAATCGGAGCCGATCTGGAGAAGGTCGCGGC CGCACTGGCCGAGGCCCAACGATCGGGCAGGGGCGAGATTTCCACGCTCGAAGGCGCGCTGCAAGATCTCGACAATCAAG TCGGTGAGGCGGTCGAGCTGGAGAAGAACCCTCAGTTGACGGCTTCGGAGAGGCAGTTGCTGGATCACTACATCGACGGA CTCGAGAAGCATGCGATCGATGACACCAAGGCATCAGTAGCCAATCTGACGCGAATCCGCGATCAATATTCTCAGCAGCT GCACACTTCTATGGACAACCTGCGTGAGCAGGACAGCTACGACCCGCCAATCCAGGCATTTGACGGCAACGTTCCGGAAT CGCCCTCGCAGGACCAACGTCGTCACAACCAGATCGAGGCCTTCAAACAGGTCTTTGGCCGTGAACCATCTTCGGCCGCA GACTGGGAGACCGCTGCCGCGCTGGATTCGCAGACCTATGACTCCAAGTTCAACGGCGCCAAATCGGAGATCCGGGTGGT CAGGATCCGCCCGGTACCCGGGCAGGGAGTGGTCCGTGTCTCGCAGTGGATCGAACAACGCGATGTGACGAGTTCCCTCA CTGGAAATCGGGACCTTGGTAACAATCGTGGGGCCGATCAACATTTTGACCCCGAGGACACCAAAGTAACGACCTACATC GACTACGAAAACGGGCTCGTGATCCTGCGTCAGAATCCCTCCGTCGAGGAGACTCCCACCGGGGCGCCGGGTACGGTCAA GGTCGGCACGCCGAAAGGCAGCGTGACTCAGTTAGCTGACGGGTCGGTTCGGATCAAATACGACGCGGGCAATCCCTTCG CGCCAAGCATTACCGCTGATACGAACGGCCCGTTTGCGGGCCACACCATCACTGTAAACGGTGACCTAGCATTCACCCCG GGACCGGAAGGCGTCCACGTGAATGGCACGCGCACTGATTATCCCTCCCTCGAGGCTTATCAGGACTTTCCAGGTGGCAG TACCCGCACGTTACTAATCGACCCAGCGCAGTCAACTAGCTCGGTGGGACCGATGTTCAACCTTCCGTTCCACCACGACG TCGGCCCATTGGGTGGTAGAGCATTCGCGCCGTTTGACAGTGGGGGTTGGAACCTCAAATACGACGTGCCAGCGCCGCTG CCCGCGACGGAGTTCGGCCCGGTTACCCGTGCCCCGTCGATTCCTCTGCTGCCAAGCGGAGTAGAGGTCCGGCCTGATCG CTTACTGACAGGAAAGCTACTCCGATGCCTTCGTTCACCCGCGCAACACCACTCGACGCCGGCGCCTGGCGCACAGCAAC CTGGTCGGCACCCCTTGTCGTCCAACTGA
Upstream 100 bases:
>100_bases CGGTGTGAGGAGCCTCGCACGGGATCAATGGTGAATTGACCCGGCGCGGAGCGTCAGTAGCCTTACGCGCAGCGGAAAGG GTGAACGGCGGGACGTTGCG
Downstream 100 bases:
>100_bases TATTGGCAATGCTGCTTGTCGCCATGTGGTTGCTGGGCAAGTGGCCGTTCGAAACGCATAGTGCGTACGCCGGTGAACGA ACATGGATGCTGACCTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 542; Mature: 542
Protein sequence:
>542_residues MHLRYISKAALIMFAGGDPWKINATLQSGRPAQISNLAKAFHDAGRSTGEAEAAFNLARGRFEQAWTHENDENPINGSAE VQRTTTSLRVQAAQLPKIGADLEKVAAALAEAQRSGRGEISTLEGALQDLDNQVGEAVELEKNPQLTASERQLLDHYIDG LEKHAIDDTKASVANLTRIRDQYSQQLHTSMDNLREQDSYDPPIQAFDGNVPESPSQDQRRHNQIEAFKQVFGREPSSAA DWETAAALDSQTYDSKFNGAKSEIRVVRIRPVPGQGVVRVSQWIEQRDVTSSLTGNRDLGNNRGADQHFDPEDTKVTTYI DYENGLVILRQNPSVEETPTGAPGTVKVGTPKGSVTQLADGSVRIKYDAGNPFAPSITADTNGPFAGHTITVNGDLAFTP GPEGVHVNGTRTDYPSLEAYQDFPGGSTRTLLIDPAQSTSSVGPMFNLPFHHDVGPLGGRAFAPFDSGGWNLKYDVPAPL PATEFGPVTRAPSIPLLPSGVEVRPDRLLTGKLLRCLRSPAQHHSTPAPGAQQPGRHPLSSN
Sequences:
>Translated_542_residues MHLRYISKAALIMFAGGDPWKINATLQSGRPAQISNLAKAFHDAGRSTGEAEAAFNLARGRFEQAWTHENDENPINGSAE VQRTTTSLRVQAAQLPKIGADLEKVAAALAEAQRSGRGEISTLEGALQDLDNQVGEAVELEKNPQLTASERQLLDHYIDG LEKHAIDDTKASVANLTRIRDQYSQQLHTSMDNLREQDSYDPPIQAFDGNVPESPSQDQRRHNQIEAFKQVFGREPSSAA DWETAAALDSQTYDSKFNGAKSEIRVVRIRPVPGQGVVRVSQWIEQRDVTSSLTGNRDLGNNRGADQHFDPEDTKVTTYI DYENGLVILRQNPSVEETPTGAPGTVKVGTPKGSVTQLADGSVRIKYDAGNPFAPSITADTNGPFAGHTITVNGDLAFTP GPEGVHVNGTRTDYPSLEAYQDFPGGSTRTLLIDPAQSTSSVGPMFNLPFHHDVGPLGGRAFAPFDSGGWNLKYDVPAPL PATEFGPVTRAPSIPLLPSGVEVRPDRLLTGKLLRCLRSPAQHHSTPAPGAQQPGRHPLSSN >Mature_542_residues MHLRYISKAALIMFAGGDPWKINATLQSGRPAQISNLAKAFHDAGRSTGEAEAAFNLARGRFEQAWTHENDENPINGSAE VQRTTTSLRVQAAQLPKIGADLEKVAAALAEAQRSGRGEISTLEGALQDLDNQVGEAVELEKNPQLTASERQLLDHYIDG LEKHAIDDTKASVANLTRIRDQYSQQLHTSMDNLREQDSYDPPIQAFDGNVPESPSQDQRRHNQIEAFKQVFGREPSSAA DWETAAALDSQTYDSKFNGAKSEIRVVRIRPVPGQGVVRVSQWIEQRDVTSSLTGNRDLGNNRGADQHFDPEDTKVTTYI DYENGLVILRQNPSVEETPTGAPGTVKVGTPKGSVTQLADGSVRIKYDAGNPFAPSITADTNGPFAGHTITVNGDLAFTP GPEGVHVNGTRTDYPSLEAYQDFPGGSTRTLLIDPAQSTSSVGPMFNLPFHHDVGPLGGRAFAPFDSGGWNLKYDVPAPL PATEFGPVTRAPSIPLLPSGVEVRPDRLLTGKLLRCLRSPAQHHSTPAPGAQQPGRHPLSSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010427 [H]
Pfam domain/function: PF06259 DUF1023 [H]
EC number: NA
Molecular weight: Translated: 58588; Mature: 58588
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLRYISKAALIMFAGGDPWKINATLQSGRPAQISNLAKAFHDAGRSTGEAEAAFNLARG CCCCEECCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH RFEQAWTHENDENPINGSAEVQRTTTSLRVQAAQLPKIGADLEKVAAALAEAQRSGRGEI HHHHHHCCCCCCCCCCCCCEEEEEHHHHEEEHHHCCCCCCCHHHHHHHHHHHHHCCCCCH STLEGALQDLDNQVGEAVELEKNPQLTASERQLLDHYIDGLEKHAIDDTKASVANLTRIR HHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH DQYSQQLHTSMDNLREQDSYDPPIQAFDGNVPESPSQDQRRHNQIEAFKQVFGREPSSAA HHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC DWETAAALDSQTYDSKFNGAKSEIRVVRIRPVPGQGVVRVSQWIEQRDVTSSLTGNRDLG CCHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCC NNRGADQHFDPEDTKVTTYIDYENGLVILRQNPSVEETPTGAPGTVKVGTPKGSVTQLAD CCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEECC GSVRIKYDAGNPFAPSITADTNGPFAGHTITVNGDLAFTPGPEGVHVNGTRTDYPSLEAY CCEEEEECCCCCCCCEEECCCCCCCCCCEEEECCEEEECCCCCCEEECCCCCCCCCCHHH QDFPGGSTRTLLIDPAQSTSSVGPMFNLPFHHDVGPLGGRAFAPFDSGGWNLKYDVPAPL HCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEECCCCCCCCEEEECCCCCC PATEFGPVTRAPSIPLLPSGVEVRPDRLLTGKLLRCLRSPAQHHSTPAPGAQQPGRHPLS CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCC SN CC >Mature Secondary Structure MHLRYISKAALIMFAGGDPWKINATLQSGRPAQISNLAKAFHDAGRSTGEAEAAFNLARG CCCCEECCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH RFEQAWTHENDENPINGSAEVQRTTTSLRVQAAQLPKIGADLEKVAAALAEAQRSGRGEI HHHHHHCCCCCCCCCCCCCEEEEEHHHHEEEHHHCCCCCCCHHHHHHHHHHHHHCCCCCH STLEGALQDLDNQVGEAVELEKNPQLTASERQLLDHYIDGLEKHAIDDTKASVANLTRIR HHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH DQYSQQLHTSMDNLREQDSYDPPIQAFDGNVPESPSQDQRRHNQIEAFKQVFGREPSSAA HHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC DWETAAALDSQTYDSKFNGAKSEIRVVRIRPVPGQGVVRVSQWIEQRDVTSSLTGNRDLG CCHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCC NNRGADQHFDPEDTKVTTYIDYENGLVILRQNPSVEETPTGAPGTVKVGTPKGSVTQLAD CCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEECC GSVRIKYDAGNPFAPSITADTNGPFAGHTITVNGDLAFTPGPEGVHVNGTRTDYPSLEAY CCEEEEECCCCCCCCEEECCCCCCCCCCEEEECCEEEECCCCCCEEECCCCCCCCCCHHH QDFPGGSTRTLLIDPAQSTSSVGPMFNLPFHHDVGPLGGRAFAPFDSGGWNLKYDVPAPL HCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCEECCCCCCCCEEEECCCCCC PATEFGPVTRAPSIPLLPSGVEVRPDRLLTGKLLRCLRSPAQHHSTPAPGAQQPGRHPLS CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCC SN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]