| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is muT4 [H]
Identifier: 41410432
GI number: 41410432
Start: 4811625
End: 4812374
Strand: Direct
Name: muT4 [H]
Synonym: MAP4334
Alternate gene names: 41410432
Gene position: 4811625-4812374 (Clockwise)
Preceding gene: 41410431
Following gene: 41410433
Centisome position: 99.62
GC content: 71.73
Gene sequence:
>750_bases GTGTCGGACGGCGAACAAGGCAAACCACGTCGGCGCCGGGGGCGGCGCCGCGGCCGTGGTGCTGCAACGTCGTCGGAGAA ACAGACCAACGGTCAACTGACCGGCGACTCGACCGCCACCAAGCCCCGCCGATCCCGTGCCGCGCGCCGCGCCCCGGATC GGCTGCGCACCGTGCACGAAACCTCCGCCGGCGGCCTGGTCATCGACGGCCTGGACGGGCCGCGCGAATCACAGGTCGCC GCCCTGATCGGGCGCATCGACCGGCGCGGCCGCATGCTGTGGTCGCTGCCCAAAGGGCACATCGAGCTGGGTGAGACCGC CGAACAGACCGCGATCAGAGAAGTAGCCGAAGAGACCGGCATCCGGGGCAGCGTGCTGGCCGCGCTGGGCCGCATCGACT ACTGGTTCGTCACCGACGGCCGGCGCGTGCACAAGACCGTGCACCACTATCTAATGCGCTTCTCCGGCGGGGAACTCTCC GACGAGGACCTCGAGGTCGCTGAGGTCGCCTGGGTGCCGATGCGCGAGCTGCCGTCCCGGCTGGCCTACGCCGACGAACG CCGGCTGGCCCGGGTCGCCGACGAGCTGATCGACAAGCTGCAAAGCGACGGCCCTGCCGCGCTTCCGCCGCTGCCGCCCA GCTCCCCGCGCCGCCGCCCGCAGACGCATTCCCGGACGCGGCATTCGGAGACGCGGCATTCGGACAAACCGGCCACCGGC CGGAAGAACGGCCACGGACCGGGGCCGTGA
Upstream 100 bases:
>100_bases TAACCGAAGTCATGAGCTGGACACAGCGCAGGACTTGCCCACGCCCACCCAGCGGCGAGTATGTCCAGGAGAACATGCCG TGCCAGCTACTATCGCTTGG
Downstream 100 bases:
>100_bases CGGCGCCGCGTTTGTGTTGGGCCGGCGGGTTGCGCATCGCCGCCGTGCTCGGCGTCCTGGCCGGGCTTGCGGTGCTCACC GGGCCGGTGACACCGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MSDGEQGKPRRRRGRRRGRGAATSSEKQTNGQLTGDSTATKPRRSRAARRAPDRLRTVHETSAGGLVIDGLDGPRESQVA ALIGRIDRRGRMLWSLPKGHIELGETAEQTAIREVAEETGIRGSVLAALGRIDYWFVTDGRRVHKTVHHYLMRFSGGELS DEDLEVAEVAWVPMRELPSRLAYADERRLARVADELIDKLQSDGPAALPPLPPSSPRRRPQTHSRTRHSETRHSDKPATG RKNGHGPGP
Sequences:
>Translated_249_residues MSDGEQGKPRRRRGRRRGRGAATSSEKQTNGQLTGDSTATKPRRSRAARRAPDRLRTVHETSAGGLVIDGLDGPRESQVA ALIGRIDRRGRMLWSLPKGHIELGETAEQTAIREVAEETGIRGSVLAALGRIDYWFVTDGRRVHKTVHHYLMRFSGGELS DEDLEVAEVAWVPMRELPSRLAYADERRLARVADELIDKLQSDGPAALPPLPPSSPRRRPQTHSRTRHSETRHSDKPATG RKNGHGPGP >Mature_248_residues SDGEQGKPRRRRGRRRGRGAATSSEKQTNGQLTGDSTATKPRRSRAARRAPDRLRTVHETSAGGLVIDGLDGPRESQVAA LIGRIDRRGRMLWSLPKGHIELGETAEQTAIREVAEETGIRGSVLAALGRIDYWFVTDGRRVHKTVHHYLMRFSGGELSD EDLEVAEVAWVPMRELPSRLAYADERRLARVADELIDKLQSDGPAALPPLPPSSPRRRPQTHSRTRHSETRHSDKPATGR KNGHGPGP
Specific function: May be involved in the GO system responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8- oxoguanine, 8-oxo-dGTP) from DNA and the nucleotide pool. In vitro has dATPase rather than 8-oxo-dGTPase activity [H]
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: NA
Molecular weight: Translated: 27568; Mature: 27437
Theoretical pI: Translated: 11.40; Mature: 11.40
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDGEQGKPRRRRGRRRGRGAATSSEKQTNGQLTGDSTATKPRRSRAARRAPDRLRTVHE CCCCCCCCHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHH TSAGGLVIDGLDGPRESQVAALIGRIDRRGRMLWSLPKGHIELGETAEQTAIREVAEETG CCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCEECCCHHHHHHHHHHHHHHC IRGSVLAALGRIDYWFVTDGRRVHKTVHHYLMRFSGGELSDEDLEVAEVAWVPMRELPSR CCHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHH LAYADERRLARVADELIDKLQSDGPAALPPLPPSSPRRRPQTHSRTRHSETRHSDKPATG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC RKNGHGPGP CCCCCCCCC >Mature Secondary Structure SDGEQGKPRRRRGRRRGRGAATSSEKQTNGQLTGDSTATKPRRSRAARRAPDRLRTVHE CCCCCCCHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHH TSAGGLVIDGLDGPRESQVAALIGRIDRRGRMLWSLPKGHIELGETAEQTAIREVAEETG CCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCEECCCHHHHHHHHHHHHHHC IRGSVLAALGRIDYWFVTDGRRVHKTVHHYLMRFSGGELSDEDLEVAEVAWVPMRELPSR CCHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHH LAYADERRLARVADELIDKLQSDGPAALPPLPPSSPRRRPQTHSRTRHSETRHSDKPATG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC RKNGHGPGP CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]