| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410425
Identifier: 41410425
GI number: 41410425
Start: 4803081
End: 4803626
Strand: Reverse
Name: 41410425
Synonym: MAP4327c
Alternate gene names: NA
Gene position: 4803626-4803081 (Counterclockwise)
Preceding gene: 41410426
Following gene: 41410424
Centisome position: 99.46
GC content: 60.26
Gene sequence:
>546_bases ATGGTAGGCGACCTACCTGCTGGCGTTGGTGAGGGGCCAAGCGTCCATCCGCCCGTGGGTAGTCGGCCACCGTCCTATCC TTGGCAGCCGGCGCGACGCCCGCGGCCATGGCTGGCGATTGCCCTAGCCGTGACGGCCGCAGTCGCCGCTGGCGCACTGG CAATCGCTCTTATTCGCCCCGCTACAAGATTGCCCGCGGCGACCACATTGCCGAAATACACCCTCAGCGAAACTGCAGCT GCGCAAAAGCACCTATGCGACACCTATAGGTTAGTGGCGCAGGCAGTAGCGACCGACACTAATGCCAACGATCGTGCGCT AGCGCGGATCGCCGATACTAACGGTGCCCTCCTGCTCAACATGCCTGCTGACAACCTCGCACTTGATGCCGATCGTCGCG ATGCCGCGAAAGCATTGGCGGCAGCGTATGGAACGGTCACTGCAAACAACAACAGTGCAGTCGCCAGCGATGCTAATTAT CAGGCTGCGCTCGATGATGTGATCGCTAAGGATATTGCGATGAAAAAGGTATGCGGTGGGGCTTGA
Upstream 100 bases:
>100_bases CAGTACCGCACGGTGAATTGCTGTCGTCCCGCCGCCTGCCTCACTATTGAGAGGTAGCGGTGATGGCACGTCAGGCGCGT TCTGACTAGTAGGAGGGCAC
Downstream 100 bases:
>100_bases CCTTCCGCCTGGGACCTGGACCGCGGCGCTTATTGGCCCTTGGTGGCCAGCACCGTCGACGGCTCTACGCGCTGGTGCTC AGCATTGGAGCGAATCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MVGDLPAGVGEGPSVHPPVGSRPPSYPWQPARRPRPWLAIALAVTAAVAAGALAIALIRPATRLPAATTLPKYTLSETAA AQKHLCDTYRLVAQAVATDTNANDRALARIADTNGALLLNMPADNLALDADRRDAAKALAAAYGTVTANNNSAVASDANY QAALDDVIAKDIAMKKVCGGA
Sequences:
>Translated_181_residues MVGDLPAGVGEGPSVHPPVGSRPPSYPWQPARRPRPWLAIALAVTAAVAAGALAIALIRPATRLPAATTLPKYTLSETAA AQKHLCDTYRLVAQAVATDTNANDRALARIADTNGALLLNMPADNLALDADRRDAAKALAAAYGTVTANNNSAVASDANY QAALDDVIAKDIAMKKVCGGA >Mature_181_residues MVGDLPAGVGEGPSVHPPVGSRPPSYPWQPARRPRPWLAIALAVTAAVAAGALAIALIRPATRLPAATTLPKYTLSETAA AQKHLCDTYRLVAQAVATDTNANDRALARIADTNGALLLNMPADNLALDADRRDAAKALAAAYGTVTANNNSAVASDANY QAALDDVIAKDIAMKKVCGGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18560; Mature: 18560
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGDLPAGVGEGPSVHPPVGSRPPSYPWQPARRPRPWLAIALAVTAAVAAGALAIALIRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC ATRLPAATTLPKYTLSETAAAQKHLCDTYRLVAQAVATDTNANDRALARIADTNGALLLN HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEE MPADNLALDADRRDAAKALAAAYGTVTANNNSAVASDANYQAALDDVIAKDIAMKKVCGG CCCCCEEECCCHHHHHHHHHHHHCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC A C >Mature Secondary Structure MVGDLPAGVGEGPSVHPPVGSRPPSYPWQPARRPRPWLAIALAVTAAVAAGALAIALIRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC ATRLPAATTLPKYTLSETAAAQKHLCDTYRLVAQAVATDTNANDRALARIADTNGALLLN HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEE MPADNLALDADRRDAAKALAAAYGTVTANNNSAVASDANYQAALDDVIAKDIAMKKVCGG CCCCCEEECCCHHHHHHHHHHHHCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA