Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41410425

Identifier: 41410425

GI number: 41410425

Start: 4803081

End: 4803626

Strand: Reverse

Name: 41410425

Synonym: MAP4327c

Alternate gene names: NA

Gene position: 4803626-4803081 (Counterclockwise)

Preceding gene: 41410426

Following gene: 41410424

Centisome position: 99.46

GC content: 60.26

Gene sequence:

>546_bases
ATGGTAGGCGACCTACCTGCTGGCGTTGGTGAGGGGCCAAGCGTCCATCCGCCCGTGGGTAGTCGGCCACCGTCCTATCC
TTGGCAGCCGGCGCGACGCCCGCGGCCATGGCTGGCGATTGCCCTAGCCGTGACGGCCGCAGTCGCCGCTGGCGCACTGG
CAATCGCTCTTATTCGCCCCGCTACAAGATTGCCCGCGGCGACCACATTGCCGAAATACACCCTCAGCGAAACTGCAGCT
GCGCAAAAGCACCTATGCGACACCTATAGGTTAGTGGCGCAGGCAGTAGCGACCGACACTAATGCCAACGATCGTGCGCT
AGCGCGGATCGCCGATACTAACGGTGCCCTCCTGCTCAACATGCCTGCTGACAACCTCGCACTTGATGCCGATCGTCGCG
ATGCCGCGAAAGCATTGGCGGCAGCGTATGGAACGGTCACTGCAAACAACAACAGTGCAGTCGCCAGCGATGCTAATTAT
CAGGCTGCGCTCGATGATGTGATCGCTAAGGATATTGCGATGAAAAAGGTATGCGGTGGGGCTTGA

Upstream 100 bases:

>100_bases
CAGTACCGCACGGTGAATTGCTGTCGTCCCGCCGCCTGCCTCACTATTGAGAGGTAGCGGTGATGGCACGTCAGGCGCGT
TCTGACTAGTAGGAGGGCAC

Downstream 100 bases:

>100_bases
CCTTCCGCCTGGGACCTGGACCGCGGCGCTTATTGGCCCTTGGTGGCCAGCACCGTCGACGGCTCTACGCGCTGGTGCTC
AGCATTGGAGCGAATCATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MVGDLPAGVGEGPSVHPPVGSRPPSYPWQPARRPRPWLAIALAVTAAVAAGALAIALIRPATRLPAATTLPKYTLSETAA
AQKHLCDTYRLVAQAVATDTNANDRALARIADTNGALLLNMPADNLALDADRRDAAKALAAAYGTVTANNNSAVASDANY
QAALDDVIAKDIAMKKVCGGA

Sequences:

>Translated_181_residues
MVGDLPAGVGEGPSVHPPVGSRPPSYPWQPARRPRPWLAIALAVTAAVAAGALAIALIRPATRLPAATTLPKYTLSETAA
AQKHLCDTYRLVAQAVATDTNANDRALARIADTNGALLLNMPADNLALDADRRDAAKALAAAYGTVTANNNSAVASDANY
QAALDDVIAKDIAMKKVCGGA
>Mature_181_residues
MVGDLPAGVGEGPSVHPPVGSRPPSYPWQPARRPRPWLAIALAVTAAVAAGALAIALIRPATRLPAATTLPKYTLSETAA
AQKHLCDTYRLVAQAVATDTNANDRALARIADTNGALLLNMPADNLALDADRRDAAKALAAAYGTVTANNNSAVASDANY
QAALDDVIAKDIAMKKVCGGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18560; Mature: 18560

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGDLPAGVGEGPSVHPPVGSRPPSYPWQPARRPRPWLAIALAVTAAVAAGALAIALIRP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
ATRLPAATTLPKYTLSETAAAQKHLCDTYRLVAQAVATDTNANDRALARIADTNGALLLN
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEE
MPADNLALDADRRDAAKALAAAYGTVTANNNSAVASDANYQAALDDVIAKDIAMKKVCGG
CCCCCEEECCCHHHHHHHHHHHHCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
A
C
>Mature Secondary Structure
MVGDLPAGVGEGPSVHPPVGSRPPSYPWQPARRPRPWLAIALAVTAAVAAGALAIALIRP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
ATRLPAATTLPKYTLSETAAAQKHLCDTYRLVAQAVATDTNANDRALARIADTNGALLLN
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEE
MPADNLALDADRRDAAKALAAAYGTVTANNNSAVASDANYQAALDDVIAKDIAMKKVCGG
CCCCCEEECCCHHHHHHHHHHHHCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA