| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410424
Identifier: 41410424
GI number: 41410424
Start: 4800932
End: 4803091
Strand: Reverse
Name: 41410424
Synonym: MAP4326c
Alternate gene names: NA
Gene position: 4803091-4800932 (Counterclockwise)
Preceding gene: 41410425
Following gene: 41410423
Centisome position: 99.45
GC content: 69.26
Gene sequence:
>2160_bases GTGGGGCTTGACCTTCCGCCTGGGACCTGGACCGCGGCGCTTATTGGCCCTTGGTGGCCAGCACCGTCGACGGCTCTACG CGCTGGTGCTCAGCATTGGAGCGAATCATGCGTGGAGCAGCAGATTTATTCGCAGACCTTGCGTACTCAGTGGACGCTGT TTGCGGCCCACAATCAAGGGCACACAGCAGATGATCTGATCGATCGATTCCAGCAAGGTGAGAAGTTTCACCTAGATCTC GCTGAGAAATACCAGGCAAAGGCATCGGCATTCAATTCGGCCGCTGATGCCACCGATTATTTGCGGAGCCGGTTGTCGGA GATAGCCAGTACGGGCAACCGCGAGATCAACGAAATCCTGGCATCGAAGAAGCTGCCTCCTGAGAAGTTAGCGGAAATTC AAGCAGTCCAGATGCGCTGCAATGCCGACGCTGCAAACGCCAGTCGCGACGCCGTGGACAAGATGATGGCAGCGACCCAA AAAATCCTTGATGCTGACGGTGTCGGTGGTGACGCGCGGAGTTGGGCGCGCGCAAATGGTTTCAATACTCAGGAAGCTCC TGCTCCGCAACAAATCACCGCCGAAGATCTCCATTTAGGCCAGGGCAAATCCTCTACCGGACCGGGAGTCGGTGGTGGTA TGCCGAGCGAGCCGCACTCCAGCGGAAGTGATCAAGCGCTCTCGAACGGAAGTCCAGGGGTCGGGGCTGCCGGCTTCCCC GGACGACCACACACGGACGCAGGCGTCGTGCCGCCGTCGGCGGGTGGGCCAGGAGTGGGTGGGGCGGGCCTGCCCGGCCC AACGGCACCAGCATCACCGGTGCCCGCTGGCGCCCCGTCGTTCTCCGCCGCCTCGGGAACTGTCCCGTCCGGCGTCCCGG GCGTACACGGCGCGCCTGCGGCGATGGCGCCGTCGGGGCTGGGCCTCGGCCAGGGCGGGCAGCCCAACCTGGCGCAATCG TTCGCCTCTGGATTGGCGACCGGCCAGGCGACGGGGCCTGGCGGACAAGCCTTTCCGGCGAACGCGCTGCAAGCGATGGA GACAGGGGCGCCGCAAACCCCGGCGGGCACACCGCCGGTAGCGCCGACCGTCCCCAGCGCCGGCGCCTTCATCGCGGCAA CGCCTCCCGTCGACGCGCCGCCGGCCGCCGCGCCGGCCCCGTCGACCGCAGGCGGCGCCGCTCCGGTCGCACCGGCGGTC ATGACGGGCGGCTCGTGGTCGTCCGCGGCGACCGGCGGGCCGTCGGTCCCCTCCGGATCTTTGCCCGCCTACGGTTCCGA TCTACGCCCACCGGTCGTGGCGGCGCCATCGGTGCCGTCCGCCCCCACCGGCCCGGTCTCCGGCGCGCCGGTGGCCCCCT CGCCGGCATCGTCGCCATCGGCGGGCGGCACGCTGGTCTCCCCGGTGGAGCGCAGCGCCGCGTCGGCCGCGGCCGGCCAG GCCGGCGCGGGCTCCTCGACGCTGGCGAACGCATCGGCGGTATCGGCGACCGCGGGCGCGACCGCCGGCGCCGCATCCAG TCGGGCGGCCGAACAGCAGCGGCTGCAGCGACTCGTCGACGCGGTAGCCCGGCAGGAACCCCGCCTGTCCTGGGCGGCGG GGCTGCGCGACGACGGCACCACCACGCTTGTCACCGACCTAGCGAGCGGGTGGATTCCACCGCACCTCCGGCTGCCCGCC CACGTAACCTTGCTCGAGCCGGCCGCCCGCCGCCACGACGCCAACGTGGTGGACCTGCTCGGCGCGGTCACGGTCGCGGC CGCCCATCACGCCAATACCTATGTGGCCGAACCGGGTTCGGACGAGCCGACACTCAGCGGCGATCGGCCGGCCCGGTCGG CCGCACCGCAGATAGACGAGCTGGGCCCCACCCTGGTGGACGCCGTCCGCCGTCGCGACGGCCTGCCGCGCATCGCCCAG GCGGTCGCGGCACCGGCGGTGCGGAAGACGGGTGTGCTGGAAAGCGAAATCCGGATGCTGCGCGAATGCACCGCCGAAAT TCAACACGCGGTATTAACGGCATATCCCCATCACGACCCTGCGGCCGTCGGAGACTGGATGCTTTTGGCGGCCATCCAGG CGTTGATCGACGGCCACGAGTACCTCGCGCACTATCACCTGGCCTGGTTCCAGGCAATCAACCACCGCGCCGGCTCGTAG
Upstream 100 bases:
>100_bases GTCACTGCAAACAACAACAGTGCAGTCGCCAGCGATGCTAATTATCAGGCTGCGCTCGATGATGTGATCGCTAAGGATAT TGCGATGAAAAAGGTATGCG
Downstream 100 bases:
>100_bases CCCGCATTCCTCGGGTGAATACCGTTATCGGCGCGCTGTGACAAAATGGCGATACGAATGATCGCCAGCGCTTGGATAAG CGTCGAACGAGCGGGGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 719; Mature: 718
Protein sequence:
>719_residues MGLDLPPGTWTAALIGPWWPAPSTALRAGAQHWSESCVEQQIYSQTLRTQWTLFAAHNQGHTADDLIDRFQQGEKFHLDL AEKYQAKASAFNSAADATDYLRSRLSEIASTGNREINEILASKKLPPEKLAEIQAVQMRCNADAANASRDAVDKMMAATQ KILDADGVGGDARSWARANGFNTQEAPAPQQITAEDLHLGQGKSSTGPGVGGGMPSEPHSSGSDQALSNGSPGVGAAGFP GRPHTDAGVVPPSAGGPGVGGAGLPGPTAPASPVPAGAPSFSAASGTVPSGVPGVHGAPAAMAPSGLGLGQGGQPNLAQS FASGLATGQATGPGGQAFPANALQAMETGAPQTPAGTPPVAPTVPSAGAFIAATPPVDAPPAAAPAPSTAGGAAPVAPAV MTGGSWSSAATGGPSVPSGSLPAYGSDLRPPVVAAPSVPSAPTGPVSGAPVAPSPASSPSAGGTLVSPVERSAASAAAGQ AGAGSSTLANASAVSATAGATAGAASSRAAEQQRLQRLVDAVARQEPRLSWAAGLRDDGTTTLVTDLASGWIPPHLRLPA HVTLLEPAARRHDANVVDLLGAVTVAAAHHANTYVAEPGSDEPTLSGDRPARSAAPQIDELGPTLVDAVRRRDGLPRIAQ AVAAPAVRKTGVLESEIRMLRECTAEIQHAVLTAYPHHDPAAVGDWMLLAAIQALIDGHEYLAHYHLAWFQAINHRAGS
Sequences:
>Translated_719_residues MGLDLPPGTWTAALIGPWWPAPSTALRAGAQHWSESCVEQQIYSQTLRTQWTLFAAHNQGHTADDLIDRFQQGEKFHLDL AEKYQAKASAFNSAADATDYLRSRLSEIASTGNREINEILASKKLPPEKLAEIQAVQMRCNADAANASRDAVDKMMAATQ KILDADGVGGDARSWARANGFNTQEAPAPQQITAEDLHLGQGKSSTGPGVGGGMPSEPHSSGSDQALSNGSPGVGAAGFP GRPHTDAGVVPPSAGGPGVGGAGLPGPTAPASPVPAGAPSFSAASGTVPSGVPGVHGAPAAMAPSGLGLGQGGQPNLAQS FASGLATGQATGPGGQAFPANALQAMETGAPQTPAGTPPVAPTVPSAGAFIAATPPVDAPPAAAPAPSTAGGAAPVAPAV MTGGSWSSAATGGPSVPSGSLPAYGSDLRPPVVAAPSVPSAPTGPVSGAPVAPSPASSPSAGGTLVSPVERSAASAAAGQ AGAGSSTLANASAVSATAGATAGAASSRAAEQQRLQRLVDAVARQEPRLSWAAGLRDDGTTTLVTDLASGWIPPHLRLPA HVTLLEPAARRHDANVVDLLGAVTVAAAHHANTYVAEPGSDEPTLSGDRPARSAAPQIDELGPTLVDAVRRRDGLPRIAQ AVAAPAVRKTGVLESEIRMLRECTAEIQHAVLTAYPHHDPAAVGDWMLLAAIQALIDGHEYLAHYHLAWFQAINHRAGS >Mature_718_residues GLDLPPGTWTAALIGPWWPAPSTALRAGAQHWSESCVEQQIYSQTLRTQWTLFAAHNQGHTADDLIDRFQQGEKFHLDLA EKYQAKASAFNSAADATDYLRSRLSEIASTGNREINEILASKKLPPEKLAEIQAVQMRCNADAANASRDAVDKMMAATQK ILDADGVGGDARSWARANGFNTQEAPAPQQITAEDLHLGQGKSSTGPGVGGGMPSEPHSSGSDQALSNGSPGVGAAGFPG RPHTDAGVVPPSAGGPGVGGAGLPGPTAPASPVPAGAPSFSAASGTVPSGVPGVHGAPAAMAPSGLGLGQGGQPNLAQSF ASGLATGQATGPGGQAFPANALQAMETGAPQTPAGTPPVAPTVPSAGAFIAATPPVDAPPAAAPAPSTAGGAAPVAPAVM TGGSWSSAATGGPSVPSGSLPAYGSDLRPPVVAAPSVPSAPTGPVSGAPVAPSPASSPSAGGTLVSPVERSAASAAAGQA GAGSSTLANASAVSATAGATAGAASSRAAEQQRLQRLVDAVARQEPRLSWAAGLRDDGTTTLVTDLASGWIPPHLRLPAH VTLLEPAARRHDANVVDLLGAVTVAAAHHANTYVAEPGSDEPTLSGDRPARSAAPQIDELGPTLVDAVRRRDGLPRIAQA VAAPAVRKTGVLESEIRMLRECTAEIQHAVLTAYPHHDPAAVGDWMLLAAIQALIDGHEYLAHYHLAWFQAINHRAGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71933; Mature: 71802
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLDLPPGTWTAALIGPWWPAPSTALRAGAQHWSESCVEQQIYSQTLRTQWTLFAAHNQG CCCCCCCCCEEEHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC HTADDLIDRFQQGEKFHLDLAEKYQAKASAFNSAADATDYLRSRLSEIASTGNREINEIL CCHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ASKKLPPEKLAEIQAVQMRCNADAANASRDAVDKMMAATQKILDADGVGGDARSWARANG HHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC FNTQEAPAPQQITAEDLHLGQGKSSTGPGVGGGMPSEPHSSGSDQALSNGSPGVGAAGFP CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC GRPHTDAGVVPPSAGGPGVGGAGLPGPTAPASPVPAGAPSFSAASGTVPSGVPGVHGAPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AMAPSGLGLGQGGQPNLAQSFASGLATGQATGPGGQAFPANALQAMETGAPQTPAGTPPV CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC APTVPSAGAFIAATPPVDAPPAAAPAPSTAGGAAPVAPAVMTGGSWSSAATGGPSVPSGS CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCC LPAYGSDLRPPVVAAPSVPSAPTGPVSGAPVAPSPASSPSAGGTLVSPVERSAASAAAGQ CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC AGAGSSTLANASAVSATAGATAGAASSRAAEQQRLQRLVDAVARQEPRLSWAAGLRDDGT CCCCCHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC TTLVTDLASGWIPPHLRLPAHVTLLEPAARRHDANVVDLLGAVTVAAAHHANTYVAEPGS HHHHHHHHHCCCCCCCCCCCEEEEECHHHHHCCCHHHHHHHHHHHHHHHHCCCEEECCCC DEPTLSGDRPARSAAPQIDELGPTLVDAVRRRDGLPRIAQAVAAPAVRKTGVLESEIRML CCCCCCCCCCCHHCCCCHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH RECTAEIQHAVLTAYPHHDPAAVGDWMLLAAIQALIDGHEYLAHYHLAWFQAINHRAGS HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GLDLPPGTWTAALIGPWWPAPSTALRAGAQHWSESCVEQQIYSQTLRTQWTLFAAHNQG CCCCCCCCEEEHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC HTADDLIDRFQQGEKFHLDLAEKYQAKASAFNSAADATDYLRSRLSEIASTGNREINEIL CCHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ASKKLPPEKLAEIQAVQMRCNADAANASRDAVDKMMAATQKILDADGVGGDARSWARANG HHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC FNTQEAPAPQQITAEDLHLGQGKSSTGPGVGGGMPSEPHSSGSDQALSNGSPGVGAAGFP CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC GRPHTDAGVVPPSAGGPGVGGAGLPGPTAPASPVPAGAPSFSAASGTVPSGVPGVHGAPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AMAPSGLGLGQGGQPNLAQSFASGLATGQATGPGGQAFPANALQAMETGAPQTPAGTPPV CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC APTVPSAGAFIAATPPVDAPPAAAPAPSTAGGAAPVAPAVMTGGSWSSAATGGPSVPSGS CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCC LPAYGSDLRPPVVAAPSVPSAPTGPVSGAPVAPSPASSPSAGGTLVSPVERSAASAAAGQ CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC AGAGSSTLANASAVSATAGATAGAASSRAAEQQRLQRLVDAVARQEPRLSWAAGLRDDGT CCCCCHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC TTLVTDLASGWIPPHLRLPAHVTLLEPAARRHDANVVDLLGAVTVAAAHHANTYVAEPGS HHHHHHHHHCCCCCCCCCCCEEEEECHHHHHCCCHHHHHHHHHHHHHHHHCCCEEECCCC DEPTLSGDRPARSAAPQIDELGPTLVDAVRRRDGLPRIAQAVAAPAVRKTGVLESEIRML CCCCCCCCCCCHHCCCCHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH RECTAEIQHAVLTAYPHHDPAAVGDWMLLAAIQALIDGHEYLAHYHLAWFQAINHRAGS HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230 [H]