Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41410424

Identifier: 41410424

GI number: 41410424

Start: 4800932

End: 4803091

Strand: Reverse

Name: 41410424

Synonym: MAP4326c

Alternate gene names: NA

Gene position: 4803091-4800932 (Counterclockwise)

Preceding gene: 41410425

Following gene: 41410423

Centisome position: 99.45

GC content: 69.26

Gene sequence:

>2160_bases
GTGGGGCTTGACCTTCCGCCTGGGACCTGGACCGCGGCGCTTATTGGCCCTTGGTGGCCAGCACCGTCGACGGCTCTACG
CGCTGGTGCTCAGCATTGGAGCGAATCATGCGTGGAGCAGCAGATTTATTCGCAGACCTTGCGTACTCAGTGGACGCTGT
TTGCGGCCCACAATCAAGGGCACACAGCAGATGATCTGATCGATCGATTCCAGCAAGGTGAGAAGTTTCACCTAGATCTC
GCTGAGAAATACCAGGCAAAGGCATCGGCATTCAATTCGGCCGCTGATGCCACCGATTATTTGCGGAGCCGGTTGTCGGA
GATAGCCAGTACGGGCAACCGCGAGATCAACGAAATCCTGGCATCGAAGAAGCTGCCTCCTGAGAAGTTAGCGGAAATTC
AAGCAGTCCAGATGCGCTGCAATGCCGACGCTGCAAACGCCAGTCGCGACGCCGTGGACAAGATGATGGCAGCGACCCAA
AAAATCCTTGATGCTGACGGTGTCGGTGGTGACGCGCGGAGTTGGGCGCGCGCAAATGGTTTCAATACTCAGGAAGCTCC
TGCTCCGCAACAAATCACCGCCGAAGATCTCCATTTAGGCCAGGGCAAATCCTCTACCGGACCGGGAGTCGGTGGTGGTA
TGCCGAGCGAGCCGCACTCCAGCGGAAGTGATCAAGCGCTCTCGAACGGAAGTCCAGGGGTCGGGGCTGCCGGCTTCCCC
GGACGACCACACACGGACGCAGGCGTCGTGCCGCCGTCGGCGGGTGGGCCAGGAGTGGGTGGGGCGGGCCTGCCCGGCCC
AACGGCACCAGCATCACCGGTGCCCGCTGGCGCCCCGTCGTTCTCCGCCGCCTCGGGAACTGTCCCGTCCGGCGTCCCGG
GCGTACACGGCGCGCCTGCGGCGATGGCGCCGTCGGGGCTGGGCCTCGGCCAGGGCGGGCAGCCCAACCTGGCGCAATCG
TTCGCCTCTGGATTGGCGACCGGCCAGGCGACGGGGCCTGGCGGACAAGCCTTTCCGGCGAACGCGCTGCAAGCGATGGA
GACAGGGGCGCCGCAAACCCCGGCGGGCACACCGCCGGTAGCGCCGACCGTCCCCAGCGCCGGCGCCTTCATCGCGGCAA
CGCCTCCCGTCGACGCGCCGCCGGCCGCCGCGCCGGCCCCGTCGACCGCAGGCGGCGCCGCTCCGGTCGCACCGGCGGTC
ATGACGGGCGGCTCGTGGTCGTCCGCGGCGACCGGCGGGCCGTCGGTCCCCTCCGGATCTTTGCCCGCCTACGGTTCCGA
TCTACGCCCACCGGTCGTGGCGGCGCCATCGGTGCCGTCCGCCCCCACCGGCCCGGTCTCCGGCGCGCCGGTGGCCCCCT
CGCCGGCATCGTCGCCATCGGCGGGCGGCACGCTGGTCTCCCCGGTGGAGCGCAGCGCCGCGTCGGCCGCGGCCGGCCAG
GCCGGCGCGGGCTCCTCGACGCTGGCGAACGCATCGGCGGTATCGGCGACCGCGGGCGCGACCGCCGGCGCCGCATCCAG
TCGGGCGGCCGAACAGCAGCGGCTGCAGCGACTCGTCGACGCGGTAGCCCGGCAGGAACCCCGCCTGTCCTGGGCGGCGG
GGCTGCGCGACGACGGCACCACCACGCTTGTCACCGACCTAGCGAGCGGGTGGATTCCACCGCACCTCCGGCTGCCCGCC
CACGTAACCTTGCTCGAGCCGGCCGCCCGCCGCCACGACGCCAACGTGGTGGACCTGCTCGGCGCGGTCACGGTCGCGGC
CGCCCATCACGCCAATACCTATGTGGCCGAACCGGGTTCGGACGAGCCGACACTCAGCGGCGATCGGCCGGCCCGGTCGG
CCGCACCGCAGATAGACGAGCTGGGCCCCACCCTGGTGGACGCCGTCCGCCGTCGCGACGGCCTGCCGCGCATCGCCCAG
GCGGTCGCGGCACCGGCGGTGCGGAAGACGGGTGTGCTGGAAAGCGAAATCCGGATGCTGCGCGAATGCACCGCCGAAAT
TCAACACGCGGTATTAACGGCATATCCCCATCACGACCCTGCGGCCGTCGGAGACTGGATGCTTTTGGCGGCCATCCAGG
CGTTGATCGACGGCCACGAGTACCTCGCGCACTATCACCTGGCCTGGTTCCAGGCAATCAACCACCGCGCCGGCTCGTAG

Upstream 100 bases:

>100_bases
GTCACTGCAAACAACAACAGTGCAGTCGCCAGCGATGCTAATTATCAGGCTGCGCTCGATGATGTGATCGCTAAGGATAT
TGCGATGAAAAAGGTATGCG

Downstream 100 bases:

>100_bases
CCCGCATTCCTCGGGTGAATACCGTTATCGGCGCGCTGTGACAAAATGGCGATACGAATGATCGCCAGCGCTTGGATAAG
CGTCGAACGAGCGGGGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 719; Mature: 718

Protein sequence:

>719_residues
MGLDLPPGTWTAALIGPWWPAPSTALRAGAQHWSESCVEQQIYSQTLRTQWTLFAAHNQGHTADDLIDRFQQGEKFHLDL
AEKYQAKASAFNSAADATDYLRSRLSEIASTGNREINEILASKKLPPEKLAEIQAVQMRCNADAANASRDAVDKMMAATQ
KILDADGVGGDARSWARANGFNTQEAPAPQQITAEDLHLGQGKSSTGPGVGGGMPSEPHSSGSDQALSNGSPGVGAAGFP
GRPHTDAGVVPPSAGGPGVGGAGLPGPTAPASPVPAGAPSFSAASGTVPSGVPGVHGAPAAMAPSGLGLGQGGQPNLAQS
FASGLATGQATGPGGQAFPANALQAMETGAPQTPAGTPPVAPTVPSAGAFIAATPPVDAPPAAAPAPSTAGGAAPVAPAV
MTGGSWSSAATGGPSVPSGSLPAYGSDLRPPVVAAPSVPSAPTGPVSGAPVAPSPASSPSAGGTLVSPVERSAASAAAGQ
AGAGSSTLANASAVSATAGATAGAASSRAAEQQRLQRLVDAVARQEPRLSWAAGLRDDGTTTLVTDLASGWIPPHLRLPA
HVTLLEPAARRHDANVVDLLGAVTVAAAHHANTYVAEPGSDEPTLSGDRPARSAAPQIDELGPTLVDAVRRRDGLPRIAQ
AVAAPAVRKTGVLESEIRMLRECTAEIQHAVLTAYPHHDPAAVGDWMLLAAIQALIDGHEYLAHYHLAWFQAINHRAGS

Sequences:

>Translated_719_residues
MGLDLPPGTWTAALIGPWWPAPSTALRAGAQHWSESCVEQQIYSQTLRTQWTLFAAHNQGHTADDLIDRFQQGEKFHLDL
AEKYQAKASAFNSAADATDYLRSRLSEIASTGNREINEILASKKLPPEKLAEIQAVQMRCNADAANASRDAVDKMMAATQ
KILDADGVGGDARSWARANGFNTQEAPAPQQITAEDLHLGQGKSSTGPGVGGGMPSEPHSSGSDQALSNGSPGVGAAGFP
GRPHTDAGVVPPSAGGPGVGGAGLPGPTAPASPVPAGAPSFSAASGTVPSGVPGVHGAPAAMAPSGLGLGQGGQPNLAQS
FASGLATGQATGPGGQAFPANALQAMETGAPQTPAGTPPVAPTVPSAGAFIAATPPVDAPPAAAPAPSTAGGAAPVAPAV
MTGGSWSSAATGGPSVPSGSLPAYGSDLRPPVVAAPSVPSAPTGPVSGAPVAPSPASSPSAGGTLVSPVERSAASAAAGQ
AGAGSSTLANASAVSATAGATAGAASSRAAEQQRLQRLVDAVARQEPRLSWAAGLRDDGTTTLVTDLASGWIPPHLRLPA
HVTLLEPAARRHDANVVDLLGAVTVAAAHHANTYVAEPGSDEPTLSGDRPARSAAPQIDELGPTLVDAVRRRDGLPRIAQ
AVAAPAVRKTGVLESEIRMLRECTAEIQHAVLTAYPHHDPAAVGDWMLLAAIQALIDGHEYLAHYHLAWFQAINHRAGS
>Mature_718_residues
GLDLPPGTWTAALIGPWWPAPSTALRAGAQHWSESCVEQQIYSQTLRTQWTLFAAHNQGHTADDLIDRFQQGEKFHLDLA
EKYQAKASAFNSAADATDYLRSRLSEIASTGNREINEILASKKLPPEKLAEIQAVQMRCNADAANASRDAVDKMMAATQK
ILDADGVGGDARSWARANGFNTQEAPAPQQITAEDLHLGQGKSSTGPGVGGGMPSEPHSSGSDQALSNGSPGVGAAGFPG
RPHTDAGVVPPSAGGPGVGGAGLPGPTAPASPVPAGAPSFSAASGTVPSGVPGVHGAPAAMAPSGLGLGQGGQPNLAQSF
ASGLATGQATGPGGQAFPANALQAMETGAPQTPAGTPPVAPTVPSAGAFIAATPPVDAPPAAAPAPSTAGGAAPVAPAVM
TGGSWSSAATGGPSVPSGSLPAYGSDLRPPVVAAPSVPSAPTGPVSGAPVAPSPASSPSAGGTLVSPVERSAASAAAGQA
GAGSSTLANASAVSATAGATAGAASSRAAEQQRLQRLVDAVARQEPRLSWAAGLRDDGTTTLVTDLASGWIPPHLRLPAH
VTLLEPAARRHDANVVDLLGAVTVAAAHHANTYVAEPGSDEPTLSGDRPARSAAPQIDELGPTLVDAVRRRDGLPRIAQA
VAAPAVRKTGVLESEIRMLRECTAEIQHAVLTAYPHHDPAAVGDWMLLAAIQALIDGHEYLAHYHLAWFQAINHRAGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71933; Mature: 71802

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLDLPPGTWTAALIGPWWPAPSTALRAGAQHWSESCVEQQIYSQTLRTQWTLFAAHNQG
CCCCCCCCCEEEHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC
HTADDLIDRFQQGEKFHLDLAEKYQAKASAFNSAADATDYLRSRLSEIASTGNREINEIL
CCHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ASKKLPPEKLAEIQAVQMRCNADAANASRDAVDKMMAATQKILDADGVGGDARSWARANG
HHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
FNTQEAPAPQQITAEDLHLGQGKSSTGPGVGGGMPSEPHSSGSDQALSNGSPGVGAAGFP
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC
GRPHTDAGVVPPSAGGPGVGGAGLPGPTAPASPVPAGAPSFSAASGTVPSGVPGVHGAPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AMAPSGLGLGQGGQPNLAQSFASGLATGQATGPGGQAFPANALQAMETGAPQTPAGTPPV
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
APTVPSAGAFIAATPPVDAPPAAAPAPSTAGGAAPVAPAVMTGGSWSSAATGGPSVPSGS
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCC
LPAYGSDLRPPVVAAPSVPSAPTGPVSGAPVAPSPASSPSAGGTLVSPVERSAASAAAGQ
CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
AGAGSSTLANASAVSATAGATAGAASSRAAEQQRLQRLVDAVARQEPRLSWAAGLRDDGT
CCCCCHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC
TTLVTDLASGWIPPHLRLPAHVTLLEPAARRHDANVVDLLGAVTVAAAHHANTYVAEPGS
HHHHHHHHHCCCCCCCCCCCEEEEECHHHHHCCCHHHHHHHHHHHHHHHHCCCEEECCCC
DEPTLSGDRPARSAAPQIDELGPTLVDAVRRRDGLPRIAQAVAAPAVRKTGVLESEIRML
CCCCCCCCCCCHHCCCCHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH
RECTAEIQHAVLTAYPHHDPAAVGDWMLLAAIQALIDGHEYLAHYHLAWFQAINHRAGS
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GLDLPPGTWTAALIGPWWPAPSTALRAGAQHWSESCVEQQIYSQTLRTQWTLFAAHNQG
CCCCCCCCEEEHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC
HTADDLIDRFQQGEKFHLDLAEKYQAKASAFNSAADATDYLRSRLSEIASTGNREINEIL
CCHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ASKKLPPEKLAEIQAVQMRCNADAANASRDAVDKMMAATQKILDADGVGGDARSWARANG
HHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
FNTQEAPAPQQITAEDLHLGQGKSSTGPGVGGGMPSEPHSSGSDQALSNGSPGVGAAGFP
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC
GRPHTDAGVVPPSAGGPGVGGAGLPGPTAPASPVPAGAPSFSAASGTVPSGVPGVHGAPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AMAPSGLGLGQGGQPNLAQSFASGLATGQATGPGGQAFPANALQAMETGAPQTPAGTPPV
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
APTVPSAGAFIAATPPVDAPPAAAPAPSTAGGAAPVAPAVMTGGSWSSAATGGPSVPSGS
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCC
LPAYGSDLRPPVVAAPSVPSAPTGPVSGAPVAPSPASSPSAGGTLVSPVERSAASAAAGQ
CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
AGAGSSTLANASAVSATAGATAGAASSRAAEQQRLQRLVDAVARQEPRLSWAAGLRDDGT
CCCCCHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC
TTLVTDLASGWIPPHLRLPAHVTLLEPAARRHDANVVDLLGAVTVAAAHHANTYVAEPGS
HHHHHHHHHCCCCCCCCCCCEEEEECHHHHHCCCHHHHHHHHHHHHHHHHCCCEEECCCC
DEPTLSGDRPARSAAPQIDELGPTLVDAVRRRDGLPRIAQAVAAPAVRKTGVLESEIRML
CCCCCCCCCCCHHCCCCHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH
RECTAEIQHAVLTAYPHHDPAAVGDWMLLAAIQALIDGHEYLAHYHLAWFQAINHRAGS
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230 [H]