| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41410414
Identifier: 41410414
GI number: 41410414
Start: 4787460
End: 4787840
Strand: Direct
Name: 41410414
Synonym: MAP4316
Alternate gene names: NA
Gene position: 4787460-4787840 (Clockwise)
Preceding gene: 41410413
Following gene: 41410417
Centisome position: 99.12
GC content: 67.45
Gene sequence:
>381_bases GTGATGACCCCGTCTTACCCCTGGGGGGACGATCGAGGGCAACTGGCGCAGCAACTACGGCTGCGGTATCACACGCTCCG CCGGCGGCGCGCGCGACGACTGTGCCACAGTTTCGAACGGGTGGGTGTTCGGACGGCGCCGGAGCGGCTGCGGGAAATGC TGGCGGGCGCGCCGCTGGCCGCTCATGAAGTGATCAACGTGAATTTCGCGTTGATCGCGATCCAGCTGAACCGGGAGGCC CGGGTCGCCCGGTACCGGCGGCTCAGGCAGCGCGGAGCCCGCTCGCTGATGTTCGCCGGGCTGATCATGGTGGTGATCAA CTTCCTGATGTGCATGGCCTACCTGCTGCTCAATCTCGCGGAGCCGGCGGCGCCCCTGTAG
Upstream 100 bases:
>100_bases GCCGCACAGCGGATGAGCGGCGGTGCCGGGACGTGACCGCCGGCCGCAGAATCCGTGTACACAACGCCAAAGCGGGCCCC GGCGATTTAGAATCCCGCTT
Downstream 100 bases:
>100_bases GCCCCCGGTGGCTCGTCAGCGCGGGGCGACGATGCCGTTGTCGTAGGCGTAGACGATCGCGGCGGCCCGGTCGCGCAGAT CGAGTTTGCCGAAGATCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MMTPSYPWGDDRGQLAQQLRLRYHTLRRRRARRLCHSFERVGVRTAPERLREMLAGAPLAAHEVINVNFALIAIQLNREA RVARYRRLRQRGARSLMFAGLIMVVINFLMCMAYLLLNLAEPAAPL
Sequences:
>Translated_126_residues MMTPSYPWGDDRGQLAQQLRLRYHTLRRRRARRLCHSFERVGVRTAPERLREMLAGAPLAAHEVINVNFALIAIQLNREA RVARYRRLRQRGARSLMFAGLIMVVINFLMCMAYLLLNLAEPAAPL >Mature_126_residues MMTPSYPWGDDRGQLAQQLRLRYHTLRRRRARRLCHSFERVGVRTAPERLREMLAGAPLAAHEVINVNFALIAIQLNREA RVARYRRLRQRGARSLMFAGLIMVVINFLMCMAYLLLNLAEPAAPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14586; Mature: 14586
Theoretical pI: Translated: 12.11; Mature: 12.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTPSYPWGDDRGQLAQQLRLRYHTLRRRRARRLCHSFERVGVRTAPERLREMLAGAPLA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHH AHEVINVNFALIAIQLNREARVARYRRLRQRGARSLMFAGLIMVVINFLMCMAYLLLNLA HHHHHHCHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EPAAPL CCCCCC >Mature Secondary Structure MMTPSYPWGDDRGQLAQQLRLRYHTLRRRRARRLCHSFERVGVRTAPERLREMLAGAPLA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHH AHEVINVNFALIAIQLNREARVARYRRLRQRGARSLMFAGLIMVVINFLMCMAYLLLNLA HHHHHHCHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EPAAPL CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA