Click here to switch to the map view.

The map label for this gene is yeaW [H]

Identifier: 41410413

GI number: 41410413

Start: 4786049

End: 4787395

Strand: Direct

Name: yeaW [H]

Synonym: MAP4315

Alternate gene names: 41410413

Gene position: 4786049-4787395 (Clockwise)

Preceding gene: 41410412

Following gene: 41410414

Centisome position: 99.09

GC content: 70.08

Gene sequence:

>1347_bases
ATGGCTGCGGCGGCCGGCAATCCGGCGCGCACCCGCGACGAGGATGCCATCGGCACCCCGCCGCCGGGCCCGACCCTGGT
GCCCGCCGAACGCTACTACTCCCCCGCCTTCGCCGCGCTCGAGGTGGAGCGGATGTGGCCGCGGGTGTGGCAACTGGCAT
GCATGGTCGATCACGTCGCGGCCCCCGGCGACTACTTCGAATACCGTTGCGGGCCATACGGTGTGCTGATCGTCCGCGGC
GACGACGGCGCGCTGCGGGCGTTCCAGAACGTGTGCCGGCACCGCGGCAACTCGTTGTGCAGCGGCTCGGGTTCGGGCCT
GCGGGAGCTCAAATGCGGCTATCACGGCTGGACCTGGGACCTGGCCGGCGCGCTCAAACGGGTGCCCGACCGCAAGGGCT
TCGGCACGCTGCGGCTGTCCGACTATCCGCTGATCCCGGCCCGGGTCGACACCTGGGCGGGCCTGGTCTTCGTCAACCTG
GACCCCGACGCGATGCCGCTGCCCGAATACCTCGAGGCGATACCCGAGGACACCGCCTGGTGCCGGCTCGACGAATTCCG
TTGCTACGCCACGCTCACTGTCGAGGTCGACGCCAACTGGAAGACCGTCGCCGACGGCTACAGCGAGACCTACCACATCC
AGACGCTGCATCCCGAGCTGCTGCGCTGCGTGGACGATATCCATGCGCCGCAACAGATCTGGGGTCACACCGGGAAGTCC
GATCAGCCCTACGGCGTGCCGAGCCCACGTTTCGAGGGTGCGCTGAGCGACGAAGAGGTCTGGGACGCCTACGTTTCCAC
CCAGGGCGCGCTGATGGGTGCGGCCGAGGGCACGCCGTTTCCCGCCGCCGACCACCGGCCCGGGCAGACGGTGGCCGACC
TGATCGCGGACCGCACCCGGGCATTCGCCGCGAGCCGCGGCGTCGATTTGGGCTGGGCCGACACCGACCGGATCACCCGG
CTGCACCAGTACAACGTCTTTCCCAACATGACGTTTCTGACCAACGCCGACCACCTCACCGTCATGTGCTCGCGGCCCGC
GCCCGACCCGGCCGCCGCGCCCGACAAGGGCGAGCTGGTGATGTTCCTGACCACCCGGATGCCGCCGGGCGCGCCGCGCA
CCAAGCCGACCGATGTCCGGATGAGCGCCGGGGAAGCCGAGCCCGGGCTGGTGCTCACCCAGGACATCGCGGTGCTCGCC
GGCCTGCAGCGCGGCATGCACCAGCCCGGCTTCACGCATCTGGTGCTGTCCAGCGAGGAGCGGCGGGTGATCAACATGCA
CCGCAACCTGGAACGCTACCTGGACCTACCCGCCGCACAGCGGATGAGCGGCGGTGCCGGGACGTGA

Upstream 100 bases:

>100_bases
CGACCATCGTCAGCGGGACCGTGACCCGCCGCAACGACGTCGACACCGGGGCCCGGCCCGGCCGCCTGGTCCGCGGGGCG
CGCTGAGGGGCGCCGCGGCG

Downstream 100 bases:

>100_bases
CCGCCGGCCGCAGAATCCGTGTACACAACGCCAAAGCGGGCCCCGGCGATTTAGAATCCCGCTTGTGATGACCCCGTCTT
ACCCCTGGGGGGACGATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MAAAAGNPARTRDEDAIGTPPPGPTLVPAERYYSPAFAALEVERMWPRVWQLACMVDHVAAPGDYFEYRCGPYGVLIVRG
DDGALRAFQNVCRHRGNSLCSGSGSGLRELKCGYHGWTWDLAGALKRVPDRKGFGTLRLSDYPLIPARVDTWAGLVFVNL
DPDAMPLPEYLEAIPEDTAWCRLDEFRCYATLTVEVDANWKTVADGYSETYHIQTLHPELLRCVDDIHAPQQIWGHTGKS
DQPYGVPSPRFEGALSDEEVWDAYVSTQGALMGAAEGTPFPAADHRPGQTVADLIADRTRAFAASRGVDLGWADTDRITR
LHQYNVFPNMTFLTNADHLTVMCSRPAPDPAAAPDKGELVMFLTTRMPPGAPRTKPTDVRMSAGEAEPGLVLTQDIAVLA
GLQRGMHQPGFTHLVLSSEERRVINMHRNLERYLDLPAAQRMSGGAGT

Sequences:

>Translated_448_residues
MAAAAGNPARTRDEDAIGTPPPGPTLVPAERYYSPAFAALEVERMWPRVWQLACMVDHVAAPGDYFEYRCGPYGVLIVRG
DDGALRAFQNVCRHRGNSLCSGSGSGLRELKCGYHGWTWDLAGALKRVPDRKGFGTLRLSDYPLIPARVDTWAGLVFVNL
DPDAMPLPEYLEAIPEDTAWCRLDEFRCYATLTVEVDANWKTVADGYSETYHIQTLHPELLRCVDDIHAPQQIWGHTGKS
DQPYGVPSPRFEGALSDEEVWDAYVSTQGALMGAAEGTPFPAADHRPGQTVADLIADRTRAFAASRGVDLGWADTDRITR
LHQYNVFPNMTFLTNADHLTVMCSRPAPDPAAAPDKGELVMFLTTRMPPGAPRTKPTDVRMSAGEAEPGLVLTQDIAVLA
GLQRGMHQPGFTHLVLSSEERRVINMHRNLERYLDLPAAQRMSGGAGT
>Mature_447_residues
AAAAGNPARTRDEDAIGTPPPGPTLVPAERYYSPAFAALEVERMWPRVWQLACMVDHVAAPGDYFEYRCGPYGVLIVRGD
DGALRAFQNVCRHRGNSLCSGSGSGLRELKCGYHGWTWDLAGALKRVPDRKGFGTLRLSDYPLIPARVDTWAGLVFVNLD
PDAMPLPEYLEAIPEDTAWCRLDEFRCYATLTVEVDANWKTVADGYSETYHIQTLHPELLRCVDDIHAPQQIWGHTGKSD
QPYGVPSPRFEGALSDEEVWDAYVSTQGALMGAAEGTPFPAADHRPGQTVADLIADRTRAFAASRGVDLGWADTDRITRL
HQYNVFPNMTFLTNADHLTVMCSRPAPDPAAAPDKGELVMFLTTRMPPGAPRTKPTDVRMSAGEAEPGLVLTQDIAVLAG
LQRGMHQPGFTHLVLSSEERRVINMHRNLERYLDLPAAQRMSGGAGT

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=245, Percent_Identity=29.7959183673469, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1788888, Length=207, Percent_Identity=31.8840579710145, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 49169; Mature: 49038

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAAGNPARTRDEDAIGTPPPGPTLVPAERYYSPAFAALEVERMWPRVWQLACMVDHVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
APGDYFEYRCGPYGVLIVRGDDGALRAFQNVCRHRGNSLCSGSGSGLRELKCGYHGWTWD
CCCCCCEECCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCHH
LAGALKRVPDRKGFGTLRLSDYPLIPARVDTWAGLVFVNLDPDAMPLPEYLEAIPEDTAW
HHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCE
CRLDEFRCYATLTVEVDANWKTVADGYSETYHIQTLHPELLRCVDDIHAPQQIWGHTGKS
EEECCEEEEEEEEEEECCCCEEECCCCCCEEEEEECCHHHHHHHHHHCCCHHHHCCCCCC
DQPYGVPSPRFEGALSDEEVWDAYVSTQGALMGAAEGTPFPAADHRPGQTVADLIADRTR
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
AFAASRGVDLGWADTDRITRLHQYNVFPNMTFLTNADHLTVMCSRPAPDPAAAPDKGELV
HHHHHCCCCCCCCCHHHHHHHHEECCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCEE
MFLTTRMPPGAPRTKPTDVRMSAGEAEPGLVLTQDIAVLAGLQRGMHQPGFTHLVLSSEE
EEEEECCCCCCCCCCCCCEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEECCCC
RRVINMHRNLERYLDLPAAQRMSGGAGT
HHHHHHHHHHHHHHCCCHHHHCCCCCCC
>Mature Secondary Structure 
AAAAGNPARTRDEDAIGTPPPGPTLVPAERYYSPAFAALEVERMWPRVWQLACMVDHVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC
APGDYFEYRCGPYGVLIVRGDDGALRAFQNVCRHRGNSLCSGSGSGLRELKCGYHGWTWD
CCCCCCEECCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCHH
LAGALKRVPDRKGFGTLRLSDYPLIPARVDTWAGLVFVNLDPDAMPLPEYLEAIPEDTAW
HHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCE
CRLDEFRCYATLTVEVDANWKTVADGYSETYHIQTLHPELLRCVDDIHAPQQIWGHTGKS
EEECCEEEEEEEEEEECCCCEEECCCCCCEEEEEECCHHHHHHHHHHCCCHHHHCCCCCC
DQPYGVPSPRFEGALSDEEVWDAYVSTQGALMGAAEGTPFPAADHRPGQTVADLIADRTR
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
AFAASRGVDLGWADTDRITRLHQYNVFPNMTFLTNADHLTVMCSRPAPDPAAAPDKGELV
HHHHHCCCCCCCCCHHHHHHHHEECCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCEE
MFLTTRMPPGAPRTKPTDVRMSAGEAEPGLVLTQDIAVLAGLQRGMHQPGFTHLVLSSEE
EEEEECCCCCCCCCCCCCEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEECCCC
RRVINMHRNLERYLDLPAAQRMSGGAGT
HHHHHHHHHHHHHHCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]