| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is fda [H]
Identifier: 41410406
GI number: 41410406
Start: 4778143
End: 4779072
Strand: Reverse
Name: fda [H]
Synonym: MAP4308c
Alternate gene names: 41410406
Gene position: 4779072-4778143 (Counterclockwise)
Preceding gene: 41410408
Following gene: 41410401
Centisome position: 98.95
GC content: 66.24
Gene sequence:
>930_bases GTGCCCGTGAGGGCCATGAGGAAGTGGGAGAGTTCAATGTCGAACCAACAGCAAGCGGAGCGGATGACATCGGGCAAAGG GTTCATCGCCGCGCTCGACCAGAGCGGCGGCTCGACGCCCAAGGCGCTGCGCCTGTACGGCATCGAAGACAGCGCGTACT CCTCCGAGAAGGAGATGTTCGACCTCATCCACCAGATGCGGTCGCGGATCATCACCTCGCCGGCGTTCACCGGCGACCGG GTGCTGGCGGCGATCCTGTTCGAGCAGACCATGGACCGCGACATCGAGGGCAAGCCGTCGACCACCTACCTGTGGGAGAC CAAGGGCGTGGTGCCCATCCTCAAGATCGACAAGGGTCTGGCCGAAGCGTCCGACGACGTGCAGCTGATGAAGCCGATCC CCGGGCTCGACGAGCTGCTGCAGCGGGCCGTGAGCAAGGGCGTGTTCGGCACCAAGGAACGGTCGGTGATCGGCGGCGCC AACCCGGTGGGCATCGCCGCGGTGGTCGCCCAGCAGTTCGAGCTCGCCCACCAGGTGCTCTCCCACGGGCTGGTGCCGAT CATCGAACCCGAGGTCACCATCTCGATCGCCGACAAGGCCAAGGCCGAGGGCATCCTGCGCGACGAGATCACCAAGCAAC TCGACTCGGTGCCCGACGGGCAGCGGGTGATGCTCAAGCTGAGCCTGCCCACCGAGGCCAACTTCTACCGCCCGCTGATC GAACACCCCAAGGTGATGCGGGTGGTGGCGCTCTCGGGTGGCTACTCCCGCGAGGAGGCCAACGAGCTGCTGGCCAAGAA CGCCGGCCTGATCGCCAGCTTCAGCCGGGCGCTCACCGAGGGCCTCACGGTCGACCAGTCCGACGAGCAGTTCAACGCGA CGCTGGACAAGGCGATCCAGTCGATTTACGACGCCTCGGTCGCCGGCTGA
Upstream 100 bases:
>100_bases GACGCGGCGAATATGATCGGCACGATCCAAGCTCGAGCGCGCGCGGGCATCTCAAAAGTCGGAGGCCGGGTGCGCCGCGC CGGCGCGGACCATGTGCGGT
Downstream 100 bases:
>100_bases GTTAGTAGCGGTGCCGGGCCATCCGCCCGGCGCCGGGTCCGCCGTCGTCGGACACCAGCGCGGGCACCATCTCGCTGGTG ACCAGGCCCTCGGCGCCGGT
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MPVRAMRKWESSMSNQQQAERMTSGKGFIAALDQSGGSTPKALRLYGIEDSAYSSEKEMFDLIHQMRSRIITSPAFTGDR VLAAILFEQTMDRDIEGKPSTTYLWETKGVVPILKIDKGLAEASDDVQLMKPIPGLDELLQRAVSKGVFGTKERSVIGGA NPVGIAAVVAQQFELAHQVLSHGLVPIIEPEVTISIADKAKAEGILRDEITKQLDSVPDGQRVMLKLSLPTEANFYRPLI EHPKVMRVVALSGGYSREEANELLAKNAGLIASFSRALTEGLTVDQSDEQFNATLDKAIQSIYDASVAG
Sequences:
>Translated_309_residues MPVRAMRKWESSMSNQQQAERMTSGKGFIAALDQSGGSTPKALRLYGIEDSAYSSEKEMFDLIHQMRSRIITSPAFTGDR VLAAILFEQTMDRDIEGKPSTTYLWETKGVVPILKIDKGLAEASDDVQLMKPIPGLDELLQRAVSKGVFGTKERSVIGGA NPVGIAAVVAQQFELAHQVLSHGLVPIIEPEVTISIADKAKAEGILRDEITKQLDSVPDGQRVMLKLSLPTEANFYRPLI EHPKVMRVVALSGGYSREEANELLAKNAGLIASFSRALTEGLTVDQSDEQFNATLDKAIQSIYDASVAG >Mature_308_residues PVRAMRKWESSMSNQQQAERMTSGKGFIAALDQSGGSTPKALRLYGIEDSAYSSEKEMFDLIHQMRSRIITSPAFTGDRV LAAILFEQTMDRDIEGKPSTTYLWETKGVVPILKIDKGLAEASDDVQLMKPIPGLDELLQRAVSKGVFGTKERSVIGGAN PVGIAAVVAQQFELAHQVLSHGLVPIIEPEVTISIADKAKAEGILRDEITKQLDSVPDGQRVMLKLSLPTEANFYRPLIE HPKVMRVVALSGGYSREEANELLAKNAGLIASFSRALTEGLTVDQSDEQFNATLDKAIQSIYDASVAG
Specific function: Unknown
COG id: COG3588
COG function: function code G; Fructose-1,6-bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class I fructose-bisphosphate aldolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000741 - InterPro: IPR013785 - InterPro: IPR023014 [H]
Pfam domain/function: PF00274 Glycolytic [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 33646; Mature: 33515
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVRAMRKWESSMSNQQQAERMTSGKGFIAALDQSGGSTPKALRLYGIEDSAYSSEKEMF CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCHHCCHHHHHH DLIHQMRSRIITSPAFTGDRVLAAILFEQTMDRDIEGKPSTTYLWETKGVVPILKIDKGL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEECCCCH AEASDDVQLMKPIPGLDELLQRAVSKGVFGTKERSVIGGANPVGIAAVVAQQFELAHQVL HCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHH SHGLVPIIEPEVTISIADKAKAEGILRDEITKQLDSVPDGQRVMLKLSLPTEANFYRPLI HCCCCEEECCCEEEEECCHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHH EHPKVMRVVALSGGYSREEANELLAKNAGLIASFSRALTEGLTVDQSDEQFNATLDKAIQ CCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH SIYDASVAG HHHHHHCCC >Mature Secondary Structure PVRAMRKWESSMSNQQQAERMTSGKGFIAALDQSGGSTPKALRLYGIEDSAYSSEKEMF CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCHHCCHHHHHH DLIHQMRSRIITSPAFTGDRVLAAILFEQTMDRDIEGKPSTTYLWETKGVVPILKIDKGL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEECCCCH AEASDDVQLMKPIPGLDELLQRAVSKGVFGTKERSVIGGANPVGIAAVVAQQFELAHQVL HCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHH SHGLVPIIEPEVTISIADKAKAEGILRDEITKQLDSVPDGQRVMLKLSLPTEANFYRPLI HCCCCEEECCCEEEEECCHHHHCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHH EHPKVMRVVALSGGYSREEANELLAKNAGLIASFSRALTEGLTVDQSDEQFNATLDKAIQ CCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH SIYDASVAG HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]