| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410408
Identifier: 41410408
GI number: 41410408
Start: 4779918
End: 4781003
Strand: Reverse
Name: 41410408
Synonym: MAP4310c
Alternate gene names: NA
Gene position: 4781003-4779918 (Counterclockwise)
Preceding gene: 41410409
Following gene: 41410406
Centisome position: 98.99
GC content: 72.01
Gene sequence:
>1086_bases GTGACGCTGGGCACCGAGCGGGAACGACGGCTGACCGGCTGGCTGCGCGGCCGGCTGCCGGACGCCGACGACGTGCGGGT CGAGGGCATCGACCGGGTCAGCTTCGGGCACTCGGCCGAGATGATGACGATGAGCGTCATCGCGGCCCGGCGCGGCCGCG ACGAGCGGCGCGACGTCGTGTTGCGGCTGCGGCCCAGCCCGCCGGCGCTGCTGGAGCCCTACGACCTGGCGCGACAGTTC GGCATCCTGCGCGCCCTGGCCGACACCGACGTCCGGGCGCCGCGGGCGCTGTGGCTGGAACCCACCGGAGACGTGCTCGG CCGGCCGTTCTTCGTGATGGAACGGGTCGCCGGCGAGGTCTACGAGATGCAGCCGCCCGCCGATGCGTCCGATGACACCG TGGCCCGGATGTGCGAGAGCCTGGCCGAACAGCTGGCCGCGATCCACGCCGTCGACCTCACCCGGACCGGACTGGCCACC CTCGACGACGGCGCCGGCCACCTGGATCGCGAACTCGGCCACTGGGCCGCCGAGATGAACCGGGTCAAACGCGGGCCGCT GCCCGCCCTGGAGCGGCTGCACCGGGCGCTGCTTGCCGGTAAGCCTGCGCCGTGCCCGCGCATCACGCTGGTGCACGGCG ACGCCAAACCGGGCAACTTCGCCTTCACCGGCGGCGAGGTCAGCGCGGTCTTCGATTGGGAGATGACCACCGTCGGCGAC CCGCTCACCGACATCGGCTGGCTGGAGATGCTGTGGATGCAGCCGGTCGGGATCAACAGCCATCCCGCGGCGCTGCCCAT CGACGCCCTGCTGGCGCACTACCAGTCGGCCAGCGGCATCGAGCCGGTCAACCGGCCCTGGTATCGGGCCTTCAACGCCT ACAAGATGGCGGTCATCTGCCTCATCGGGGCGATGCTCGTCGAGGACGGCCACAGCGACGACCAGAAGCTGGTGCTGGCC GCCTACGGCACCGGGCTGCTGACCAAGGCCGGACTCGCCGAGCTGGGCATCGACGAACCCCTCGACGACGGCCCGGTGCT GCCGCGGCAGGAACGCATCCAGCAGGTGCTGGCCCGCGCCCAGTGA
Upstream 100 bases:
>100_bases ATCGTCGCTACCCCAATTGGAGGGCCATGGACATGTCCGCGTTCACCCAGGACAAGACGCCGGTGGACCGGTTGCCGGCC GACGGCGACGGGGCCGACCG
Downstream 100 bases:
>100_bases TCAGGCATTCGCGTCCGCGCGAACCGGGACCGGTCATCGATCAGCCCCGGCGCGGCTCACGCACCGGACAGGGCGCTCAG CGCGTCGTTCAGGCTCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase Domain-Containing Protein; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-Coa Dehydrogenase Fade; Aminoglycoside Phosphotransferase-Like Protein; Acyl-CoA Dehydrogenase Family Member
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MTLGTERERRLTGWLRGRLPDADDVRVEGIDRVSFGHSAEMMTMSVIAARRGRDERRDVVLRLRPSPPALLEPYDLARQF GILRALADTDVRAPRALWLEPTGDVLGRPFFVMERVAGEVYEMQPPADASDDTVARMCESLAEQLAAIHAVDLTRTGLAT LDDGAGHLDRELGHWAAEMNRVKRGPLPALERLHRALLAGKPAPCPRITLVHGDAKPGNFAFTGGEVSAVFDWEMTTVGD PLTDIGWLEMLWMQPVGINSHPAALPIDALLAHYQSASGIEPVNRPWYRAFNAYKMAVICLIGAMLVEDGHSDDQKLVLA AYGTGLLTKAGLAELGIDEPLDDGPVLPRQERIQQVLARAQ
Sequences:
>Translated_361_residues MTLGTERERRLTGWLRGRLPDADDVRVEGIDRVSFGHSAEMMTMSVIAARRGRDERRDVVLRLRPSPPALLEPYDLARQF GILRALADTDVRAPRALWLEPTGDVLGRPFFVMERVAGEVYEMQPPADASDDTVARMCESLAEQLAAIHAVDLTRTGLAT LDDGAGHLDRELGHWAAEMNRVKRGPLPALERLHRALLAGKPAPCPRITLVHGDAKPGNFAFTGGEVSAVFDWEMTTVGD PLTDIGWLEMLWMQPVGINSHPAALPIDALLAHYQSASGIEPVNRPWYRAFNAYKMAVICLIGAMLVEDGHSDDQKLVLA AYGTGLLTKAGLAELGIDEPLDDGPVLPRQERIQQVLARAQ >Mature_360_residues TLGTERERRLTGWLRGRLPDADDVRVEGIDRVSFGHSAEMMTMSVIAARRGRDERRDVVLRLRPSPPALLEPYDLARQFG ILRALADTDVRAPRALWLEPTGDVLGRPFFVMERVAGEVYEMQPPADASDDTVARMCESLAEQLAAIHAVDLTRTGLATL DDGAGHLDRELGHWAAEMNRVKRGPLPALERLHRALLAGKPAPCPRITLVHGDAKPGNFAFTGGEVSAVFDWEMTTVGDP LTDIGWLEMLWMQPVGINSHPAALPIDALLAHYQSASGIEPVNRPWYRAFNAYKMAVICLIGAMLVEDGHSDDQKLVLAA YGTGLLTKAGLAELGIDEPLDDGPVLPRQERIQQVLARAQ
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI211971008, Length=303, Percent_Identity=29.7029702970297, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI48976061, Length=303, Percent_Identity=29.7029702970297, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI38505218, Length=276, Percent_Identity=27.1739130434783, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17562446, Length=300, Percent_Identity=27.3333333333333, Blast_Score=92, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39624; Mature: 39493
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLGTERERRLTGWLRGRLPDADDVRVEGIDRVSFGHSAEMMTMSVIAARRGRDERRDVV CCCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEE LRLRPSPPALLEPYDLARQFGILRALADTDVRAPRALWLEPTGDVLGRPFFVMERVAGEV EEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHCCHHHHHHHHHHHH YEMQPPADASDDTVARMCESLAEQLAAIHAVDLTRTGLATLDDGAGHLDRELGHWAAEMN EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH RVKRGPLPALERLHRALLAGKPAPCPRITLVHGDAKPGNFAFTGGEVSAVFDWEMTTVGD HHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEECCCEEEEEEEEHHHCCC PLTDIGWLEMLWMQPVGINSHPAALPIDALLAHYQSASGIEPVNRPWYRAFNAYKMAVIC CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH LIGAMLVEDGHSDDQKLVLAAYGTGLLTKAGLAELGIDEPLDDGPVLPRQERIQQVLARA HHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHC Q C >Mature Secondary Structure TLGTERERRLTGWLRGRLPDADDVRVEGIDRVSFGHSAEMMTMSVIAARRGRDERRDVV CCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEE LRLRPSPPALLEPYDLARQFGILRALADTDVRAPRALWLEPTGDVLGRPFFVMERVAGEV EEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHCCHHHHHHHHHHHH YEMQPPADASDDTVARMCESLAEQLAAIHAVDLTRTGLATLDDGAGHLDRELGHWAAEMN EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH RVKRGPLPALERLHRALLAGKPAPCPRITLVHGDAKPGNFAFTGGEVSAVFDWEMTTVGD HHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEECCCEEEEEEEEHHHCCC PLTDIGWLEMLWMQPVGINSHPAALPIDALLAHYQSASGIEPVNRPWYRAFNAYKMAVIC CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH LIGAMLVEDGHSDDQKLVLAAYGTGLLTKAGLAELGIDEPLDDGPVLPRQERIQQVLARA HHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHC Q C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA