| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41410404
Identifier: 41410404
GI number: 41410404
Start: 4775885
End: 4777057
Strand: Direct
Name: 41410404
Synonym: MAP4306
Alternate gene names: NA
Gene position: 4775885-4777057 (Clockwise)
Preceding gene: 41410403
Following gene: 41410405
Centisome position: 98.88
GC content: 68.2
Gene sequence:
>1173_bases GTGAGCCTGCAGGACCGGTTCGCCCCGGAACGGCTGATCGCCGCCGCCTGCGAGGAGGCCGGCAGCGACGACTTCGGCGC CGAGGGCTGGCGGCCCGGGCTACACCGCCTCACCGACGGGCTGATCAACGACGCGCGGCTGTCCGACATCGGCGTCGAGA TCGCTCACCTGGACATCATGCGCGCGCTGAAGAACCGGCTCAACGTAATCGCTTGGCGCAAAGCACATCCCGAGGTGGCC GAGCAGAAGATCAGCGCCCCGATCTTCATCGTCGGCCAGCCGCGCACCGGGACGACGATCCTCTACGACCTGCTCGCCCA GGATCCCGCGCTGCGCGCGCCGCTCACCTGGGAGGTCGACGAGCCCTGTCCGGTGCCGCGGCCCGAGACCTATCACGACG ATCCGCGCATCGCCCGGACACAGGCCGGCATCGACCTGTCCGAGCAGATCATGCCCGGGTTCCTGGCCTTTCACCCGATG GGCGCGCTGGTCGGGCAGGAGTGTGTGCGCATCACCGCGGCCGAGTTCGTCAGCATGATCTTCTCGGTGCAGTACCGGCT GCCGAACTACTACCGCTGGCTGCTGTACGAGGCGGACCACGCGGGCGCCTACCGCTTCCACCGAATTTTCCTGCAGCACT TGCAGTCCGGCGTGCCCGGGCAGTGGTTGCTGAAATCCCCGGCGCACCTGTGGCAGCTGGATGCGCTGCTGGCCGAGTAC CCGGACGCGCTGATCGTGCAGACCCACCGCGATCCGCTCAACGTCATCTCCTCCATCGCGGCGCTGACCCATCACCTGCG CGGGATGTGTAGCGACGAGTCCAGCATCACCGAGTGCGCGGCGCAGTCCTACGAGGAGATCGTCGTGGGCCTGGACCGCG AGATGGCCCTGCGCGACCGTGGCGCCGTGCCGCCCGGCCGCGTGATCGACGTGCAGTACGCCGATTTCATGAAGGACCCG TGGACCACGATCAAAGACATCTATGAGCGGCTGGACCGCGAGCTGCGGCCCGATGCCGAGCAAAGAATGCGCGAGTTCCT CGCGTCGCATCCCTCCGACGGTGGGCGCAGCCGCTACACCTGGTCGGACACCGGGCTGGACGCCGGTGCGGTGCGTGAGC GGGTGCGCACCTATCAGGACCGCTACGGGGTACCCACCGAGGCGTTGCGCTGA
Upstream 100 bases:
>100_bases ACACCGGCGGCCGGCATCGCGGCTTCGTCGTGCTGCGCTGGCTGGACAACCCGAGCCCGCCCGAGGTCGCGGTGTCGGTG CGCGAAGCGCGGGAGCGACC
Downstream 100 bases:
>100_bases GGCGACGGGAGCTGCGGTGGACGACGATTGCCTGAAACTCACCACCTACCTGGCCGAGCGGAGACGGGCCGGGAACCGCT TCGTCTCCGACGTCCTGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MSLQDRFAPERLIAAACEEAGSDDFGAEGWRPGLHRLTDGLINDARLSDIGVEIAHLDIMRALKNRLNVIAWRKAHPEVA EQKISAPIFIVGQPRTGTTILYDLLAQDPALRAPLTWEVDEPCPVPRPETYHDDPRIARTQAGIDLSEQIMPGFLAFHPM GALVGQECVRITAAEFVSMIFSVQYRLPNYYRWLLYEADHAGAYRFHRIFLQHLQSGVPGQWLLKSPAHLWQLDALLAEY PDALIVQTHRDPLNVISSIAALTHHLRGMCSDESSITECAAQSYEEIVVGLDREMALRDRGAVPPGRVIDVQYADFMKDP WTTIKDIYERLDRELRPDAEQRMREFLASHPSDGGRSRYTWSDTGLDAGAVRERVRTYQDRYGVPTEALR
Sequences:
>Translated_390_residues MSLQDRFAPERLIAAACEEAGSDDFGAEGWRPGLHRLTDGLINDARLSDIGVEIAHLDIMRALKNRLNVIAWRKAHPEVA EQKISAPIFIVGQPRTGTTILYDLLAQDPALRAPLTWEVDEPCPVPRPETYHDDPRIARTQAGIDLSEQIMPGFLAFHPM GALVGQECVRITAAEFVSMIFSVQYRLPNYYRWLLYEADHAGAYRFHRIFLQHLQSGVPGQWLLKSPAHLWQLDALLAEY PDALIVQTHRDPLNVISSIAALTHHLRGMCSDESSITECAAQSYEEIVVGLDREMALRDRGAVPPGRVIDVQYADFMKDP WTTIKDIYERLDRELRPDAEQRMREFLASHPSDGGRSRYTWSDTGLDAGAVRERVRTYQDRYGVPTEALR >Mature_389_residues SLQDRFAPERLIAAACEEAGSDDFGAEGWRPGLHRLTDGLINDARLSDIGVEIAHLDIMRALKNRLNVIAWRKAHPEVAE QKISAPIFIVGQPRTGTTILYDLLAQDPALRAPLTWEVDEPCPVPRPETYHDDPRIARTQAGIDLSEQIMPGFLAFHPMG ALVGQECVRITAAEFVSMIFSVQYRLPNYYRWLLYEADHAGAYRFHRIFLQHLQSGVPGQWLLKSPAHLWQLDALLAEYP DALIVQTHRDPLNVISSIAALTHHLRGMCSDESSITECAAQSYEEIVVGLDREMALRDRGAVPPGRVIDVQYADFMKDPW TTIKDIYERLDRELRPDAEQRMREFLASHPSDGGRSRYTWSDTGLDAGAVRERVRTYQDRYGVPTEALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44137; Mature: 44005
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQDRFAPERLIAAACEEAGSDDFGAEGWRPGLHRLTDGLINDARLSDIGVEIAHLDIM CCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH RALKNRLNVIAWRKAHPEVAEQKISAPIFIVGQPRTGTTILYDLLAQDPALRAPLTWEVD HHHHHHHCEEEECCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEECCC EPCPVPRPETYHDDPRIARTQAGIDLSEQIMPGFLAFHPMGALVGQECVRITAAEFVSMI CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSVQYRLPNYYRWLLYEADHAGAYRFHRIFLQHLQSGVPGQWLLKSPAHLWQLDALLAEY HHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHC PDALIVQTHRDPLNVISSIAALTHHLRGMCSDESSITECAAQSYEEIVVGLDREMALRDR CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHC GAVPPGRVIDVQYADFMKDPWTTIKDIYERLDRELRPDAEQRMREFLASHPSDGGRSRYT CCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEE WSDTGLDAGAVRERVRTYQDRYGVPTEALR ECCCCCCHHHHHHHHHHHHHHCCCCHHHCC >Mature Secondary Structure SLQDRFAPERLIAAACEEAGSDDFGAEGWRPGLHRLTDGLINDARLSDIGVEIAHLDIM CCCHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH RALKNRLNVIAWRKAHPEVAEQKISAPIFIVGQPRTGTTILYDLLAQDPALRAPLTWEVD HHHHHHHCEEEECCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEECCC EPCPVPRPETYHDDPRIARTQAGIDLSEQIMPGFLAFHPMGALVGQECVRITAAEFVSMI CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSVQYRLPNYYRWLLYEADHAGAYRFHRIFLQHLQSGVPGQWLLKSPAHLWQLDALLAEY HHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHC PDALIVQTHRDPLNVISSIAALTHHLRGMCSDESSITECAAQSYEEIVVGLDREMALRDR CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHC GAVPPGRVIDVQYADFMKDPWTTIKDIYERLDRELRPDAEQRMREFLASHPSDGGRSRYT CCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEE WSDTGLDAGAVRERVRTYQDRYGVPTEALR ECCCCCCHHHHHHHHHHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA