Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41410404

Identifier: 41410404

GI number: 41410404

Start: 4775885

End: 4777057

Strand: Direct

Name: 41410404

Synonym: MAP4306

Alternate gene names: NA

Gene position: 4775885-4777057 (Clockwise)

Preceding gene: 41410403

Following gene: 41410405

Centisome position: 98.88

GC content: 68.2

Gene sequence:

>1173_bases
GTGAGCCTGCAGGACCGGTTCGCCCCGGAACGGCTGATCGCCGCCGCCTGCGAGGAGGCCGGCAGCGACGACTTCGGCGC
CGAGGGCTGGCGGCCCGGGCTACACCGCCTCACCGACGGGCTGATCAACGACGCGCGGCTGTCCGACATCGGCGTCGAGA
TCGCTCACCTGGACATCATGCGCGCGCTGAAGAACCGGCTCAACGTAATCGCTTGGCGCAAAGCACATCCCGAGGTGGCC
GAGCAGAAGATCAGCGCCCCGATCTTCATCGTCGGCCAGCCGCGCACCGGGACGACGATCCTCTACGACCTGCTCGCCCA
GGATCCCGCGCTGCGCGCGCCGCTCACCTGGGAGGTCGACGAGCCCTGTCCGGTGCCGCGGCCCGAGACCTATCACGACG
ATCCGCGCATCGCCCGGACACAGGCCGGCATCGACCTGTCCGAGCAGATCATGCCCGGGTTCCTGGCCTTTCACCCGATG
GGCGCGCTGGTCGGGCAGGAGTGTGTGCGCATCACCGCGGCCGAGTTCGTCAGCATGATCTTCTCGGTGCAGTACCGGCT
GCCGAACTACTACCGCTGGCTGCTGTACGAGGCGGACCACGCGGGCGCCTACCGCTTCCACCGAATTTTCCTGCAGCACT
TGCAGTCCGGCGTGCCCGGGCAGTGGTTGCTGAAATCCCCGGCGCACCTGTGGCAGCTGGATGCGCTGCTGGCCGAGTAC
CCGGACGCGCTGATCGTGCAGACCCACCGCGATCCGCTCAACGTCATCTCCTCCATCGCGGCGCTGACCCATCACCTGCG
CGGGATGTGTAGCGACGAGTCCAGCATCACCGAGTGCGCGGCGCAGTCCTACGAGGAGATCGTCGTGGGCCTGGACCGCG
AGATGGCCCTGCGCGACCGTGGCGCCGTGCCGCCCGGCCGCGTGATCGACGTGCAGTACGCCGATTTCATGAAGGACCCG
TGGACCACGATCAAAGACATCTATGAGCGGCTGGACCGCGAGCTGCGGCCCGATGCCGAGCAAAGAATGCGCGAGTTCCT
CGCGTCGCATCCCTCCGACGGTGGGCGCAGCCGCTACACCTGGTCGGACACCGGGCTGGACGCCGGTGCGGTGCGTGAGC
GGGTGCGCACCTATCAGGACCGCTACGGGGTACCCACCGAGGCGTTGCGCTGA

Upstream 100 bases:

>100_bases
ACACCGGCGGCCGGCATCGCGGCTTCGTCGTGCTGCGCTGGCTGGACAACCCGAGCCCGCCCGAGGTCGCGGTGTCGGTG
CGCGAAGCGCGGGAGCGACC

Downstream 100 bases:

>100_bases
GGCGACGGGAGCTGCGGTGGACGACGATTGCCTGAAACTCACCACCTACCTGGCCGAGCGGAGACGGGCCGGGAACCGCT
TCGTCTCCGACGTCCTGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: Hydrolase

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MSLQDRFAPERLIAAACEEAGSDDFGAEGWRPGLHRLTDGLINDARLSDIGVEIAHLDIMRALKNRLNVIAWRKAHPEVA
EQKISAPIFIVGQPRTGTTILYDLLAQDPALRAPLTWEVDEPCPVPRPETYHDDPRIARTQAGIDLSEQIMPGFLAFHPM
GALVGQECVRITAAEFVSMIFSVQYRLPNYYRWLLYEADHAGAYRFHRIFLQHLQSGVPGQWLLKSPAHLWQLDALLAEY
PDALIVQTHRDPLNVISSIAALTHHLRGMCSDESSITECAAQSYEEIVVGLDREMALRDRGAVPPGRVIDVQYADFMKDP
WTTIKDIYERLDRELRPDAEQRMREFLASHPSDGGRSRYTWSDTGLDAGAVRERVRTYQDRYGVPTEALR

Sequences:

>Translated_390_residues
MSLQDRFAPERLIAAACEEAGSDDFGAEGWRPGLHRLTDGLINDARLSDIGVEIAHLDIMRALKNRLNVIAWRKAHPEVA
EQKISAPIFIVGQPRTGTTILYDLLAQDPALRAPLTWEVDEPCPVPRPETYHDDPRIARTQAGIDLSEQIMPGFLAFHPM
GALVGQECVRITAAEFVSMIFSVQYRLPNYYRWLLYEADHAGAYRFHRIFLQHLQSGVPGQWLLKSPAHLWQLDALLAEY
PDALIVQTHRDPLNVISSIAALTHHLRGMCSDESSITECAAQSYEEIVVGLDREMALRDRGAVPPGRVIDVQYADFMKDP
WTTIKDIYERLDRELRPDAEQRMREFLASHPSDGGRSRYTWSDTGLDAGAVRERVRTYQDRYGVPTEALR
>Mature_389_residues
SLQDRFAPERLIAAACEEAGSDDFGAEGWRPGLHRLTDGLINDARLSDIGVEIAHLDIMRALKNRLNVIAWRKAHPEVAE
QKISAPIFIVGQPRTGTTILYDLLAQDPALRAPLTWEVDEPCPVPRPETYHDDPRIARTQAGIDLSEQIMPGFLAFHPMG
ALVGQECVRITAAEFVSMIFSVQYRLPNYYRWLLYEADHAGAYRFHRIFLQHLQSGVPGQWLLKSPAHLWQLDALLAEYP
DALIVQTHRDPLNVISSIAALTHHLRGMCSDESSITECAAQSYEEIVVGLDREMALRDRGAVPPGRVIDVQYADFMKDPW
TTIKDIYERLDRELRPDAEQRMREFLASHPSDGGRSRYTWSDTGLDAGAVRERVRTYQDRYGVPTEALR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44137; Mature: 44005

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLQDRFAPERLIAAACEEAGSDDFGAEGWRPGLHRLTDGLINDARLSDIGVEIAHLDIM
CCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RALKNRLNVIAWRKAHPEVAEQKISAPIFIVGQPRTGTTILYDLLAQDPALRAPLTWEVD
HHHHHHHCEEEECCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEECCC
EPCPVPRPETYHDDPRIARTQAGIDLSEQIMPGFLAFHPMGALVGQECVRITAAEFVSMI
CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSVQYRLPNYYRWLLYEADHAGAYRFHRIFLQHLQSGVPGQWLLKSPAHLWQLDALLAEY
HHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHC
PDALIVQTHRDPLNVISSIAALTHHLRGMCSDESSITECAAQSYEEIVVGLDREMALRDR
CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHC
GAVPPGRVIDVQYADFMKDPWTTIKDIYERLDRELRPDAEQRMREFLASHPSDGGRSRYT
CCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEE
WSDTGLDAGAVRERVRTYQDRYGVPTEALR
ECCCCCCHHHHHHHHHHHHHHCCCCHHHCC
>Mature Secondary Structure 
SLQDRFAPERLIAAACEEAGSDDFGAEGWRPGLHRLTDGLINDARLSDIGVEIAHLDIM
CCCHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RALKNRLNVIAWRKAHPEVAEQKISAPIFIVGQPRTGTTILYDLLAQDPALRAPLTWEVD
HHHHHHHCEEEECCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEECCC
EPCPVPRPETYHDDPRIARTQAGIDLSEQIMPGFLAFHPMGALVGQECVRITAAEFVSMI
CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSVQYRLPNYYRWLLYEADHAGAYRFHRIFLQHLQSGVPGQWLLKSPAHLWQLDALLAEY
HHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHC
PDALIVQTHRDPLNVISSIAALTHHLRGMCSDESSITECAAQSYEEIVVGLDREMALRDR
CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHC
GAVPPGRVIDVQYADFMKDPWTTIKDIYERLDRELRPDAEQRMREFLASHPSDGGRSRYT
CCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEE
WSDTGLDAGAVRERVRTYQDRYGVPTEALR
ECCCCCCHHHHHHHHHHHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA