| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410403
Identifier: 41410403
GI number: 41410403
Start: 4774968
End: 4775888
Strand: Direct
Name: 41410403
Synonym: MAP4305
Alternate gene names: NA
Gene position: 4774968-4775888 (Clockwise)
Preceding gene: 41410402
Following gene: 41410404
Centisome position: 98.87
GC content: 69.71
Gene sequence:
>921_bases ATGACGGTCGAGGCCGACCCGGAGCGGCCGTCGTTCTTCGATATGTGTTCGGACAACCGGATGGTCGGCGGCCCCAACCC GGACGGCAACTACTACCTGGCGATGATCCGCGGGGACCGCCGCTACCGGATCACCGGCACCCGGGGAACCAGCGCGTACC TGGGTTTTCAGATCCTGGCCGGCACCGGGCTCACCCCGCGGCGGATGGCCGGTTATCTCAGCGACGCCGACTTGGCCTCG GAGGCAGGGCAATTCGCGCTGCTGCTGTCGGCCGACGAGCCGTCGGATCCGGCCGGCGCCCAGTGGGTGAAGATCCCGCC GGATGCGTCGTCGGTGGTGGTCCGGGAATACATCGGCGATCGGGCCGCCGAGCAATTGGCCGCCCTGCGCATCGAGGCGC TGGACCCCGGCCCGCTGACGCCGCTCACCGACGAGCAGCTCGCCGATCAGTTCACCGCGATGGCATGGTCGTTGATGAAG CTCGCGACGCTGCACCTCACCATCAAACCCGAACTGCTGCAATCCCCCAACACGTTGCTGACCGCCCAGGCCGCCGACCT GGGCGAGGCCGACACCACCCCGGACAACCTGTACATGATGGGCACCTTCCGGCTCGACCCCGGCCAGGCCCTGGTGCTCG ACATCGCGCCGCCCGACACCCGGTATTGGAACGTCACGCTGGAAAGCATCTGGCACGAATGCCTGGAGCCGCGCCGCCGG CACAGCTCGGTGACGAACCGCGGCGTGCGGCCGGACGCGGACGGACGGGTGCGCATCGCGATCTCCGCGCGGGACTTCGG GTTTGGCCATTGGCTGGACACCGGCGGCCGGCATCGCGGCTTCGTCGTGCTGCGCTGGCTGGACAACCCGAGCCCGCCCG AGGTCGCGGTGTCGGTGCGCGAAGCGCGGGAGCGACCGTGA
Upstream 100 bases:
>100_bases CGCCGACGTCACCGCGATCGTGACCGAGGACGCCGAGACCGAACGGGAACTGGCCGAGGGGCTGCGCGTGGTGGCGCGGG TGTCGTCACTGTGTGCGCAG
Downstream 100 bases:
>100_bases GCCTGCAGGACCGGTTCGCCCCGGAACGGCTGATCGCCGCCGCCTGCGAGGAGGCCGGCAGCGACGACTTCGGCGCCGAG GGCTGGCGGCCCGGGCTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTVEADPERPSFFDMCSDNRMVGGPNPDGNYYLAMIRGDRRYRITGTRGTSAYLGFQILAGTGLTPRRMAGYLSDADLAS EAGQFALLLSADEPSDPAGAQWVKIPPDASSVVVREYIGDRAAEQLAALRIEALDPGPLTPLTDEQLADQFTAMAWSLMK LATLHLTIKPELLQSPNTLLTAQAADLGEADTTPDNLYMMGTFRLDPGQALVLDIAPPDTRYWNVTLESIWHECLEPRRR HSSVTNRGVRPDADGRVRIAISARDFGFGHWLDTGGRHRGFVVLRWLDNPSPPEVAVSVREARERP
Sequences:
>Translated_306_residues MTVEADPERPSFFDMCSDNRMVGGPNPDGNYYLAMIRGDRRYRITGTRGTSAYLGFQILAGTGLTPRRMAGYLSDADLAS EAGQFALLLSADEPSDPAGAQWVKIPPDASSVVVREYIGDRAAEQLAALRIEALDPGPLTPLTDEQLADQFTAMAWSLMK LATLHLTIKPELLQSPNTLLTAQAADLGEADTTPDNLYMMGTFRLDPGQALVLDIAPPDTRYWNVTLESIWHECLEPRRR HSSVTNRGVRPDADGRVRIAISARDFGFGHWLDTGGRHRGFVVLRWLDNPSPPEVAVSVREARERP >Mature_305_residues TVEADPERPSFFDMCSDNRMVGGPNPDGNYYLAMIRGDRRYRITGTRGTSAYLGFQILAGTGLTPRRMAGYLSDADLASE AGQFALLLSADEPSDPAGAQWVKIPPDASSVVVREYIGDRAAEQLAALRIEALDPGPLTPLTDEQLADQFTAMAWSLMKL ATLHLTIKPELLQSPNTLLTAQAADLGEADTTPDNLYMMGTFRLDPGQALVLDIAPPDTRYWNVTLESIWHECLEPRRRH SSVTNRGVRPDADGRVRIAISARDFGFGHWLDTGGRHRGFVVLRWLDNPSPPEVAVSVREARERP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33718; Mature: 33587
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVEADPERPSFFDMCSDNRMVGGPNPDGNYYLAMIRGDRRYRITGTRGTSAYLGFQILA CCCCCCCCCCCHHHHCCCCCEECCCCCCCCEEEEEEECCCEEEEEECCCCCEEEEEEEEE GTGLTPRRMAGYLSDADLASEAGQFALLLSADEPSDPAGAQWVKIPPDASSVVVREYIGD CCCCCHHHHHHCCCCCHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHCH RAAEQLAALRIEALDPGPLTPLTDEQLADQFTAMAWSLMKLATLHLTIKPELLQSPNTLL HHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECHHHHCCCCEEE TAQAADLGEADTTPDNLYMMGTFRLDPGQALVLDIAPPDTRYWNVTLESIWHECLEPRRR EEECCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHH HSSVTNRGVRPDADGRVRIAISARDFGFGHWLDTGGRHRGFVVLRWLDNPSPPEVAVSVR HHHHHHCCCCCCCCCEEEEEEEECCCCCCHHCCCCCCCCCEEEEEECCCCCCHHEEEEHH EARERP HHCCCC >Mature Secondary Structure TVEADPERPSFFDMCSDNRMVGGPNPDGNYYLAMIRGDRRYRITGTRGTSAYLGFQILA CCCCCCCCCCHHHHCCCCCEECCCCCCCCEEEEEEECCCEEEEEECCCCCEEEEEEEEE GTGLTPRRMAGYLSDADLASEAGQFALLLSADEPSDPAGAQWVKIPPDASSVVVREYIGD CCCCCHHHHHHCCCCCHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHCH RAAEQLAALRIEALDPGPLTPLTDEQLADQFTAMAWSLMKLATLHLTIKPELLQSPNTLL HHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECHHHHCCCCEEE TAQAADLGEADTTPDNLYMMGTFRLDPGQALVLDIAPPDTRYWNVTLESIWHECLEPRRR EEECCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHH HSSVTNRGVRPDADGRVRIAISARDFGFGHWLDTGGRHRGFVVLRWLDNPSPPEVAVSVR HHHHHHCCCCCCCCCEEEEEEEECCCCCCHHCCCCCCCCCEEEEEECCCCCCHHEEEEHH EARERP HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA