| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yjeE [C]
Identifier: 41410358
GI number: 41410358
Start: 4730150
End: 4730629
Strand: Direct
Name: yjeE [C]
Synonym: MAP4260
Alternate gene names: 41410358
Gene position: 4730150-4730629 (Clockwise)
Preceding gene: 41410357
Following gene: 41410359
Centisome position: 97.94
GC content: 73.12
Gene sequence:
>480_bases GTGGCTGAATCCGGCACCGCGACGCTGCCCACCGCGCAGGACACCGCCGCGCTCGGCGCGCGGCTGGCCGAGCAGCTGCG CGCCGGCGACGTGGTGGTGCTCTCCGGCCCGCTTGGCGCCGGAAAGACGGTGCTGGCCAAGGGAATTGCCGCGGCAATGG ATGTCGACGGCCCGGTCACCTCGCCGTCCTATGTGCTGGCCCGGGTGCACCCGCCGCGGCGGCCCGGCGCGCCGACGATG ATCCACGTCGACCTGTACCGGTTGCTCGACCACACCGGCAATCAGGGTGCCGACCTGCTCGGTGAGCTCGACTCGCTGGA CCTGGACAGCGATCTGGACGACGCCGTCGTGGTGGCGGAGTGGGGTGAGGGCCTGGTCGAGCGCCTCGCGCCGCGGCACC TGGACATCCGGCTGGAGCGGGTCAGCGGATCCGACGTGCGGATCGCGACCTGGCGCTGGGCCGGCGGGGAGCCGTCATGA
Upstream 100 bases:
>100_bases CCGGAGGCCATCAACGGCGGGCTGGTGCGGCTGGTCCGCCGCGCCACCCCGAGCCGGGCCGCACTGGCGCTGCGGCGAAT CGGGGAAAGGTTGTGGCGCC
Downstream 100 bases:
>100_bases GCCCGCTGGTGCTGGCCCTGGACACCTCCACGCCGGCGGTGACCGCCGGCATCGTGCGCCGCGACGATCTGTCCGTGCTG GCCCAGCGGATCACCGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MAESGTATLPTAQDTAALGARLAEQLRAGDVVVLSGPLGAGKTVLAKGIAAAMDVDGPVTSPSYVLARVHPPRRPGAPTM IHVDLYRLLDHTGNQGADLLGELDSLDLDSDLDDAVVVAEWGEGLVERLAPRHLDIRLERVSGSDVRIATWRWAGGEPS
Sequences:
>Translated_159_residues MAESGTATLPTAQDTAALGARLAEQLRAGDVVVLSGPLGAGKTVLAKGIAAAMDVDGPVTSPSYVLARVHPPRRPGAPTM IHVDLYRLLDHTGNQGADLLGELDSLDLDSDLDDAVVVAEWGEGLVERLAPRHLDIRLERVSGSDVRIATWRWAGGEPS >Mature_158_residues AESGTATLPTAQDTAALGARLAEQLRAGDVVVLSGPLGAGKTVLAKGIAAAMDVDGPVTSPSYVLARVHPPRRPGAPTMI HVDLYRLLDHTGNQGADLLGELDSLDLDSDLDDAVVVAEWGEGLVERLAPRHLDIRLERVSGSDVRIATWRWAGGEPS
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 16677; Mature: 16546
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESGTATLPTAQDTAALGARLAEQLRAGDVVVLSGPLGAGKTVLAKGIAAAMDVDGPVT CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHEECCCCCCC SPSYVLARVHPPRRPGAPTMIHVDLYRLLDHTGNQGADLLGELDSLDLDSDLDDAVVVAE CCCEEEEEECCCCCCCCCEEEHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCEEEEEH WGEGLVERLAPRHLDIRLERVSGSDVRIATWRWAGGEPS HHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEECCCCCC >Mature Secondary Structure AESGTATLPTAQDTAALGARLAEQLRAGDVVVLSGPLGAGKTVLAKGIAAAMDVDGPVT CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHEECCCCCCC SPSYVLARVHPPRRPGAPTMIHVDLYRLLDHTGNQGADLLGELDSLDLDSDLDDAVVVAE CCCEEEEEECCCCCCCCCEEEHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCEEEEEH WGEGLVERLAPRHLDIRLERVSGSDVRIATWRWAGGEPS HHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]