| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410357
Identifier: 41410357
GI number: 41410357
Start: 4729153
End: 4730157
Strand: Direct
Name: 41410357
Synonym: MAP4259
Alternate gene names: NA
Gene position: 4729153-4730157 (Clockwise)
Preceding gene: 41410356
Following gene: 41410358
Centisome position: 97.92
GC content: 69.55
Gene sequence:
>1005_bases ATGACCCAGCGGGCCACCATCGAAGACCCTTACGCCGACGAGGATTTCAACACCTTCGACGGTGACCGCGCCCTGGTGGT GACCACACCCGACGGGGTGCCGCTGGCGGTGCGCGAAGCCGGCCCGCCCGACGCGCCGCTGACCATGGTGTTCGTCCACG GGTTCTGTCTGCAGATGGGCGCCTTCCATTTTCAGCGGACCCGGCTGCCCGAACAGCTGGGACCCGACGTGCGGATGGTC TTCTACGACCAGCGCGGGCACGGCAGATCCGGGGAGGCCGCACCCGAGAGCTACACGCTGACCCAGCTCGGCCGGGACCT GCAAACCGTGCTGCAGGTGGTGGCGCCGCGCGGGCTGGTGGTGCTGGTGGGCCACTCGATGGGCGGCATGACCGTGCTCT CGCACGCGCGCCAGTTCCCCGAGCAGTACGGCCGCCGGATCGTCGGTGCCGCGCTTATTTCGTCTGCGGCCGAAGGGGTT TCGCGGTCGCCGCTGGGTGAGATCTTGAAAAACCCTGCGCTGGAGGCGGTTCGGGTTGCCGCCCGGTCGGCGCCGAAGCT AATGCACCGGGGCCGCAACGTGTCCCGCTCGCTGATCGGCCCGGTGTTGCGGGCCGCCTCCTTCAGCGACCTGCAGGTCA GCCGGAGCCTGGACGCGTTCTCCCAGCGGATGATGAACAGCACACCCATCCCGACCATGGTGGGCTTTCTGGACGCATTG GAACACCACGACGAGACCGCCGGGCTGTGGACGCTGCTGCGGGTCCCCACCCTGATCGCCTGCGGCGACCACGACCTGCT CACCTCGGACGAGTATTCCCGCAAGATGGCGGCCAGCCTGCCGCAGTCCGAGCTCGTCATCGTCGCCGGGGCCAGTCACC TGGCGCTGCTGGACAAGCCGGAGGCCATCAACGGCGGGCTGGTGCGGCTGGTCCGCCGCGCCACCCCGAGCCGGGCCGCA CTGGCGCTGCGGCGAATCGGGGAAAGGTTGTGGCGCCGTGGCTGA
Upstream 100 bases:
>100_bases TGACCGAACCCGCAAGCGCCACAAGGGCAGGACCTGGCTTGCGGGGGGCGCGGGGGTGACCGCGGTCGCCACCATCGTCG GGGCCTCGGCCCGCCGGTCC
Downstream 100 bases:
>100_bases ATCCGGCACCGCGACGCTGCCCACCGCGCAGGACACCGCCGCGCTCGGCGCGCGGCTGGCCGAGCAGCTGCGCGCCGGCG ACGTGGTGGTGCTCTCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold; Lipase; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Fold; Hydrolase Alpha/Beta Fold Family Protein; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily; Alpha/Beta Fold Family Hydrolase; Proline Iminopeptidase; Alpha/Beta Hydrolase Fold Family Hydrolase; Alpha/Beta Superfamily-Like Protein; Alpha/Beta Hydrolase Fold Containing Protein; Hydrolase Alpha/Beta Fold Family; Lysophospholipase; 3-Oxoadipate Enol-Lactonase; Alpha/Beta Hydrolase Fold Family Protein; Alpha/Beta Family Hydrolase; Non-Heme Haloperoxidase Hpx
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTQRATIEDPYADEDFNTFDGDRALVVTTPDGVPLAVREAGPPDAPLTMVFVHGFCLQMGAFHFQRTRLPEQLGPDVRMV FYDQRGHGRSGEAAPESYTLTQLGRDLQTVLQVVAPRGLVVLVGHSMGGMTVLSHARQFPEQYGRRIVGAALISSAAEGV SRSPLGEILKNPALEAVRVAARSAPKLMHRGRNVSRSLIGPVLRAASFSDLQVSRSLDAFSQRMMNSTPIPTMVGFLDAL EHHDETAGLWTLLRVPTLIACGDHDLLTSDEYSRKMAASLPQSELVIVAGASHLALLDKPEAINGGLVRLVRRATPSRAA LALRRIGERLWRRG
Sequences:
>Translated_334_residues MTQRATIEDPYADEDFNTFDGDRALVVTTPDGVPLAVREAGPPDAPLTMVFVHGFCLQMGAFHFQRTRLPEQLGPDVRMV FYDQRGHGRSGEAAPESYTLTQLGRDLQTVLQVVAPRGLVVLVGHSMGGMTVLSHARQFPEQYGRRIVGAALISSAAEGV SRSPLGEILKNPALEAVRVAARSAPKLMHRGRNVSRSLIGPVLRAASFSDLQVSRSLDAFSQRMMNSTPIPTMVGFLDAL EHHDETAGLWTLLRVPTLIACGDHDLLTSDEYSRKMAASLPQSELVIVAGASHLALLDKPEAINGGLVRLVRRATPSRAA LALRRIGERLWRRG >Mature_333_residues TQRATIEDPYADEDFNTFDGDRALVVTTPDGVPLAVREAGPPDAPLTMVFVHGFCLQMGAFHFQRTRLPEQLGPDVRMVF YDQRGHGRSGEAAPESYTLTQLGRDLQTVLQVVAPRGLVVLVGHSMGGMTVLSHARQFPEQYGRRIVGAALISSAAEGVS RSPLGEILKNPALEAVRVAARSAPKLMHRGRNVSRSLIGPVLRAASFSDLQVSRSLDAFSQRMMNSTPIPTMVGFLDALE HHDETAGLWTLLRVPTLIACGDHDLLTSDEYSRKMAASLPQSELVIVAGASHLALLDKPEAINGGLVRLVRRATPSRAAL ALRRIGERLWRRG
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36339; Mature: 36208
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRATIEDPYADEDFNTFDGDRALVVTTPDGVPLAVREAGPPDAPLTMVFVHGFCLQMG CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH AFHFQRTRLPEQLGPDVRMVFYDQRGHGRSGEAAPESYTLTQLGRDLQTVLQVVAPRGLV HHHHHHHCCHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE VLVGHSMGGMTVLSHARQFPEQYGRRIVGAALISSAAEGVSRSPLGEILKNPALEAVRVA EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHH ARSAPKLMHRGRNVSRSLIGPVLRAASFSDLQVSRSLDAFSQRMMNSTPIPTMVGFLDAL HHCCHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EHHDETAGLWTLLRVPTLIACGDHDLLTSDEYSRKMAASLPQSELVIVAGASHLALLDKP HHCCHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEECCC EAINGGLVRLVRRATPSRAALALRRIGERLWRRG CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQRATIEDPYADEDFNTFDGDRALVVTTPDGVPLAVREAGPPDAPLTMVFVHGFCLQMG CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH AFHFQRTRLPEQLGPDVRMVFYDQRGHGRSGEAAPESYTLTQLGRDLQTVLQVVAPRGLV HHHHHHHCCHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE VLVGHSMGGMTVLSHARQFPEQYGRRIVGAALISSAAEGVSRSPLGEILKNPALEAVRVA EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHH ARSAPKLMHRGRNVSRSLIGPVLRAASFSDLQVSRSLDAFSQRMMNSTPIPTMVGFLDAL HHCCHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EHHDETAGLWTLLRVPTLIACGDHDLLTSDEYSRKMAASLPQSELVIVAGASHLALLDKP HHCCHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEECCC EAINGGLVRLVRRATPSRAALALRRIGERLWRRG CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA