| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410274
Identifier: 41410274
GI number: 41410274
Start: 4650264
End: 4651766
Strand: Direct
Name: 41410274
Synonym: MAP4176
Alternate gene names: NA
Gene position: 4650264-4651766 (Clockwise)
Preceding gene: 41410273
Following gene: 41410275
Centisome position: 96.28
GC content: 73.99
Gene sequence:
>1503_bases ATGTTCGAAGACGCGGTCGCCTGGTTCGACGAGCTGATGGAGCGGTGCTACCCGTCGGCGACGCCGGAGTCGGCGGCGCT GGTGCAGCGGATCGGTGTCTTCGCGCGGGTGGAGAATCGGGCGGCGGCCGAGCAGTTGGCGGCCATTGGGGAGCTGTTCG CCTATCGGCTGTCGCGCTGCTCGGAGTGCGAGGACTGGGCGGTCGACACCGAGGCCGCGGTGAGCGCGGAGGTGGCGGCC CAGCTGCGGATCGGGCAGGGGTTGGCCGCCGCCAAGGTGCGCTACGCACGGGCAATGCGCGAACGGCTGCCCCGGGTGGG TGAGGTCTTTCGGGCCGGGGAGATCGACTTCCGGCTGTTCGCAACGATCGTGTATCGCACCGATCTGATCACCGATCGCC GGGTGCTGGCGGCCGTGGACGCCGAGTTGGCCGCGACGGCGGCGCGCTGGCCGTCGATGACCCGGGCGCGGTTGGCCGCC CGGGTGGACGCGGTGGTGGCCAAGGCCGACGCCGACGCGGTGCGGCGCGCCGAGAAGCAGGCGGCGACCCGCCACGTCTG GATCGCCGAGATGGGTGAGGGCCTGTCGCATCTGGAGGGCACGGTGTCGAGTCCCGACGCGCACGCGCTGGACAAACGGC TGGATGCGTTGGCCGCCACGGTGTGCGAGCACGACCCGCGCACTGGTGAGCAGCGCCGCGCCGACGCGCTGGGGGCGCTG GCCGCCGGGGCCGACCGGTTGGGCTGCCGGTGTGGCCGCGCCGATTGTGCGGCCGGTACGGGGCCCGCCGCCGGGCCGGT GGTGATCCACGTGATCGCCGAGCGGGCCAGCGTCGAGGGCACCGGCGGCGGGCCGGCGGTCGAGGTCGGCGCCGAGGGTC TCCTCCCGGCGCAGCTGGTCGCCGAGCTGGCCGCGTCGGCCAGGCTGATGCCGCTGGTCCACCCCGCCGATTCGTCTCCG GAGAACCGGTACACGCCGTCGGCGGCGCTGGCCGACTTCGTGCGCTGCCGGGATTTGACCTGCCGCTGGCCCGGCTGCGA CCGCCCGGCCACCGAGTGCGACCTGGACCATACGATTCCCTACGCCGAGGGCGGGCCCACCCACGCGTCAAACCTCAAGT GCTACTGCAGAACTCACCATTTGGTGAAGACCTTCTGGGGCTGGCGGGAACAACAGCTGCCGGATGCGACGCTGATCCTG ACCTCGCCGGCGGGGCAGACCTATGTCACCACCCCGGGCAGCGCGCTGCTGTTCCCGTCGTTGTGCGTGCCCACCGGTGA GCCGGCCCGGCCGGTCGCGGCCGGATCCCAGCCCTGCGGTGAGCGCACCGCGATGATGCCCACCCGCCGGCGCACCCGCG GCCAAAATCGCGCCGCCCGGGTGGCCGCCGAACGCCGGGCCAACCGCGCCGCCCGGCTGGCCCGGGCAACTCGGCCGGCC CCTGCGGCGAGCCAGTCCTGGCCGGCCGGCCATGGGCCCGACGCCGACCCGCCGCCGTTCTAG
Upstream 100 bases:
>100_bases GCAGGGCGACTGACCGCCGCGTACGCCAGGTGCGCCGGTTATCCACAGGTCGCGGTCCTGCCAAGCGCCCGAGTCGGCGG ACAGTGCTACTCTCGCACAT
Downstream 100 bases:
>100_bases CTGCTCTAGCTGCGAAATCTCGCCGGCTGAGAACCCTGCACCCGGAATTTGGCTCTGAGCTGGTCGTCCCCTAGACTCTA GGGGTTGCCTTGGGCAGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MFEDAVAWFDELMERCYPSATPESAALVQRIGVFARVENRAAAEQLAAIGELFAYRLSRCSECEDWAVDTEAAVSAEVAA QLRIGQGLAAAKVRYARAMRERLPRVGEVFRAGEIDFRLFATIVYRTDLITDRRVLAAVDAELAATAARWPSMTRARLAA RVDAVVAKADADAVRRAEKQAATRHVWIAEMGEGLSHLEGTVSSPDAHALDKRLDALAATVCEHDPRTGEQRRADALGAL AAGADRLGCRCGRADCAAGTGPAAGPVVIHVIAERASVEGTGGGPAVEVGAEGLLPAQLVAELAASARLMPLVHPADSSP ENRYTPSAALADFVRCRDLTCRWPGCDRPATECDLDHTIPYAEGGPTHASNLKCYCRTHHLVKTFWGWREQQLPDATLIL TSPAGQTYVTTPGSALLFPSLCVPTGEPARPVAAGSQPCGERTAMMPTRRRTRGQNRAARVAAERRANRAARLARATRPA PAASQSWPAGHGPDADPPPF
Sequences:
>Translated_500_residues MFEDAVAWFDELMERCYPSATPESAALVQRIGVFARVENRAAAEQLAAIGELFAYRLSRCSECEDWAVDTEAAVSAEVAA QLRIGQGLAAAKVRYARAMRERLPRVGEVFRAGEIDFRLFATIVYRTDLITDRRVLAAVDAELAATAARWPSMTRARLAA RVDAVVAKADADAVRRAEKQAATRHVWIAEMGEGLSHLEGTVSSPDAHALDKRLDALAATVCEHDPRTGEQRRADALGAL AAGADRLGCRCGRADCAAGTGPAAGPVVIHVIAERASVEGTGGGPAVEVGAEGLLPAQLVAELAASARLMPLVHPADSSP ENRYTPSAALADFVRCRDLTCRWPGCDRPATECDLDHTIPYAEGGPTHASNLKCYCRTHHLVKTFWGWREQQLPDATLIL TSPAGQTYVTTPGSALLFPSLCVPTGEPARPVAAGSQPCGERTAMMPTRRRTRGQNRAARVAAERRANRAARLARATRPA PAASQSWPAGHGPDADPPPF >Mature_500_residues MFEDAVAWFDELMERCYPSATPESAALVQRIGVFARVENRAAAEQLAAIGELFAYRLSRCSECEDWAVDTEAAVSAEVAA QLRIGQGLAAAKVRYARAMRERLPRVGEVFRAGEIDFRLFATIVYRTDLITDRRVLAAVDAELAATAARWPSMTRARLAA RVDAVVAKADADAVRRAEKQAATRHVWIAEMGEGLSHLEGTVSSPDAHALDKRLDALAATVCEHDPRTGEQRRADALGAL AAGADRLGCRCGRADCAAGTGPAAGPVVIHVIAERASVEGTGGGPAVEVGAEGLLPAQLVAELAASARLMPLVHPADSSP ENRYTPSAALADFVRCRDLTCRWPGCDRPATECDLDHTIPYAEGGPTHASNLKCYCRTHHLVKTFWGWREQQLPDATLIL TSPAGQTYVTTPGSALLFPSLCVPTGEPARPVAAGSQPCGERTAMMPTRRRTRGQNRAARVAAERRANRAARLARATRPA PAASQSWPAGHGPDADPPPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv3776 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003870 - InterPro: IPR003615 [H]
Pfam domain/function: PF02720 DUF222 [H]
EC number: NA
Molecular weight: Translated: 53429; Mature: 53429
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: PS00063 ALDOKETO_REDUCTASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEDAVAWFDELMERCYPSATPESAALVQRIGVFARVENRAAAEQLAAIGELFAYRLSRC CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SECEDWAVDTEAAVSAEVAAQLRIGQGLAAAKVRYARAMRERLPRVGEVFRAGEIDFRLF CCCHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHH ATIVYRTDLITDRRVLAAVDAELAATAARWPSMTRARLAARVDAVVAKADADAVRRAEKQ HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH AATRHVWIAEMGEGLSHLEGTVSSPDAHALDKRLDALAATVCEHDPRTGEQRRADALGAL HHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AAGADRLGCRCGRADCAAGTGPAAGPVVIHVIAERASVEGTGGGPAVEVGAEGLLPAQLV HHCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCEEECCCCCCCHHHHH AELAASARLMPLVHPADSSPENRYTPSAALADFVRCRDLTCRWPGCDRPATECDLDHTIP HHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC YAEGGPTHASNLKCYCRTHHLVKTFWGWREQQLPDATLILTSPAGQTYVTTPGSALLFPS CCCCCCCCCCCCEEEHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCEEEECCCCHHHCCH LCVPTGEPARPVAAGSQPCGERTAMMPTRRRTRGQNRAARVAAERRANRAARLARATRPA HCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC PAASQSWPAGHGPDADPPPF CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFEDAVAWFDELMERCYPSATPESAALVQRIGVFARVENRAAAEQLAAIGELFAYRLSRC CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SECEDWAVDTEAAVSAEVAAQLRIGQGLAAAKVRYARAMRERLPRVGEVFRAGEIDFRLF CCCHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHH ATIVYRTDLITDRRVLAAVDAELAATAARWPSMTRARLAARVDAVVAKADADAVRRAEKQ HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH AATRHVWIAEMGEGLSHLEGTVSSPDAHALDKRLDALAATVCEHDPRTGEQRRADALGAL HHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AAGADRLGCRCGRADCAAGTGPAAGPVVIHVIAERASVEGTGGGPAVEVGAEGLLPAQLV HHCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCEEECCCCCCCHHHHH AELAASARLMPLVHPADSSPENRYTPSAALADFVRCRDLTCRWPGCDRPATECDLDHTIP HHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC YAEGGPTHASNLKCYCRTHHLVKTFWGWREQQLPDATLILTSPAGQTYVTTPGSALLFPS CCCCCCCCCCCCEEEHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCEEEECCCCHHHCCH LCVPTGEPARPVAAGSQPCGERTAMMPTRRRTRGQNRAARVAAERRANRAARLARATRPA HCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC PAASQSWPAGHGPDADPPPF CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]