Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41410273

Identifier: 41410273

GI number: 41410273

Start: 4649256

End: 4650176

Strand: Direct

Name: 41410273

Synonym: MAP4175

Alternate gene names: NA

Gene position: 4649256-4650176 (Clockwise)

Preceding gene: 41410272

Following gene: 41410274

Centisome position: 96.26

GC content: 68.3

Gene sequence:

>921_bases
ATGACAGCAACGGCGGTGGCAGCCCAAGCGCCCGTGACGAAGAAGCGGGACAGGCCGCGGATCGCGATCGGGGTGTGCAT
CCTGGCGGGCGTCGTCATCGTCTACGTGCTGTCGCTGTTCGGGGTGCATTTCCTGCAGCGCTCCGAGGGGCCGCTGCCGC
CGCTGGATCTGAGCCAGGGCGGCGGGGACGCCACCATCGTGCAGTTGCGCCTCGAGGAGCTCAAGCCCGTCGCGAATCGG
CTCTCGGTCAACGTCCTGGTCTATCCCGGAGTTGCCCAGTACGACAACCGATTCGACGTCCTGGCCAATGACGTGGCGGT
GCGCCTTTATCCCACAAGCGATCTGGGCGATCTGCACTACCCCAAGGGCAAGGCGCCGGCGCAACTGAGCACCACCGTGG
AGGCGCACGGCGATCCCGGGAACTGGCCGTTCGACTCCTACCGCACCGAGCCGATCTCCGCGGACGCGTTCGTCGGCTCC
GGGGACAACCTGAAGAAGGTGCCCGCCCGGGTGGAAGTCACCGGGGCCCTGGACGGTTGGCAGATCACCGTCGACCGCGT
CCGCGACCCCGCGGCGCTGCCGACGCAACGGGGCAGCGACAACGGCGACGTCGTCATCACGCTGAAGCGGGCCAAGGGGC
CGCTGATCTTCGATCTCGGGATCTGCCTGGTGCTGATCAGCCTGCCCACCCTGGCGCTGCTGGTCGCGATTCCCATGGCG
ATGGGCCGACGCAAATTCCTGCCGCCGTTCGCCACCTGGTACGCGGCCAACCTGTTCGCCATCGTGCCGCTGCGCAACAT
CCTGCCCGGGGCGCCGCCGCCCGGGTCCTGGATCGACCAGGCGATCGTGCAGTGGGTGCTGATCGCGCTGGTGGCGGCGA
TGACCCTGTACATCATCGCGTGGGTGCGGCAGGGCGACTGA

Upstream 100 bases:

>100_bases
GATGCCTTGGTGGACAAGAGATTTCACCGCGCGCCGGACCCCTGCGTTCGCTAGCATCTGACGACATGTCGCACCGCGCA
ACCCAAATGGTGTTGGCCTG

Downstream 100 bases:

>100_bases
CCGCCGCGTACGCCAGGTGCGCCGGTTATCCACAGGTCGCGGTCCTGCCAAGCGCCCGAGTCGGCGGACAGTGCTACTCT
CGCACATATGTTCGAAGACG

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTATAVAAQAPVTKKRDRPRIAIGVCILAGVVIVYVLSLFGVHFLQRSEGPLPPLDLSQGGGDATIVQLRLEELKPVANR
LSVNVLVYPGVAQYDNRFDVLANDVAVRLYPTSDLGDLHYPKGKAPAQLSTTVEAHGDPGNWPFDSYRTEPISADAFVGS
GDNLKKVPARVEVTGALDGWQITVDRVRDPAALPTQRGSDNGDVVITLKRAKGPLIFDLGICLVLISLPTLALLVAIPMA
MGRRKFLPPFATWYAANLFAIVPLRNILPGAPPPGSWIDQAIVQWVLIALVAAMTLYIIAWVRQGD

Sequences:

>Translated_306_residues
MTATAVAAQAPVTKKRDRPRIAIGVCILAGVVIVYVLSLFGVHFLQRSEGPLPPLDLSQGGGDATIVQLRLEELKPVANR
LSVNVLVYPGVAQYDNRFDVLANDVAVRLYPTSDLGDLHYPKGKAPAQLSTTVEAHGDPGNWPFDSYRTEPISADAFVGS
GDNLKKVPARVEVTGALDGWQITVDRVRDPAALPTQRGSDNGDVVITLKRAKGPLIFDLGICLVLISLPTLALLVAIPMA
MGRRKFLPPFATWYAANLFAIVPLRNILPGAPPPGSWIDQAIVQWVLIALVAAMTLYIIAWVRQGD
>Mature_305_residues
TATAVAAQAPVTKKRDRPRIAIGVCILAGVVIVYVLSLFGVHFLQRSEGPLPPLDLSQGGGDATIVQLRLEELKPVANRL
SVNVLVYPGVAQYDNRFDVLANDVAVRLYPTSDLGDLHYPKGKAPAQLSTTVEAHGDPGNWPFDSYRTEPISADAFVGSG
DNLKKVPARVEVTGALDGWQITVDRVRDPAALPTQRGSDNGDVVITLKRAKGPLIFDLGICLVLISLPTLALLVAIPMAM
GRRKFLPPFATWYAANLFAIVPLRNILPGAPPPGSWIDQAIVQWVLIALVAAMTLYIIAWVRQGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32953; Mature: 32822

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATAVAAQAPVTKKRDRPRIAIGVCILAGVVIVYVLSLFGVHFLQRSEGPLPPLDLSQG
CCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GGDATIVQLRLEELKPVANRLSVNVLVYPGVAQYDNRFDVLANDVAVRLYPTSDLGDLHY
CCCEEEEEEEHHHHHHHHHHEEEEEEEECCHHHHCCCHHEEECCEEEEEEECCCCCCCCC
PKGKAPAQLSTTVEAHGDPGNWPFDSYRTEPISADAFVGSGDNLKKVPARVEVTGALDGW
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCC
QITVDRVRDPAALPTQRGSDNGDVVITLKRAKGPLIFDLGICLVLISLPTLALLVAIPMA
EEEHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
MGRRKFLPPFATWYAANLFAIVPLRNILPGAPPPGSWIDQAIVQWVLIALVAAMTLYIIA
HCCCCCCCHHHHHHHHHHHHEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WVRQGD
HHHCCC
>Mature Secondary Structure 
TATAVAAQAPVTKKRDRPRIAIGVCILAGVVIVYVLSLFGVHFLQRSEGPLPPLDLSQG
CCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
GGDATIVQLRLEELKPVANRLSVNVLVYPGVAQYDNRFDVLANDVAVRLYPTSDLGDLHY
CCCEEEEEEEHHHHHHHHHHEEEEEEEECCHHHHCCCHHEEECCEEEEEEECCCCCCCCC
PKGKAPAQLSTTVEAHGDPGNWPFDSYRTEPISADAFVGSGDNLKKVPARVEVTGALDGW
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCC
QITVDRVRDPAALPTQRGSDNGDVVITLKRAKGPLIFDLGICLVLISLPTLALLVAIPMA
EEEHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
MGRRKFLPPFATWYAANLFAIVPLRNILPGAPPPGSWIDQAIVQWVLIALVAAMTLYIIA
HCCCCCCCHHHHHHHHHHHHEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WVRQGD
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA