| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410273
Identifier: 41410273
GI number: 41410273
Start: 4649256
End: 4650176
Strand: Direct
Name: 41410273
Synonym: MAP4175
Alternate gene names: NA
Gene position: 4649256-4650176 (Clockwise)
Preceding gene: 41410272
Following gene: 41410274
Centisome position: 96.26
GC content: 68.3
Gene sequence:
>921_bases ATGACAGCAACGGCGGTGGCAGCCCAAGCGCCCGTGACGAAGAAGCGGGACAGGCCGCGGATCGCGATCGGGGTGTGCAT CCTGGCGGGCGTCGTCATCGTCTACGTGCTGTCGCTGTTCGGGGTGCATTTCCTGCAGCGCTCCGAGGGGCCGCTGCCGC CGCTGGATCTGAGCCAGGGCGGCGGGGACGCCACCATCGTGCAGTTGCGCCTCGAGGAGCTCAAGCCCGTCGCGAATCGG CTCTCGGTCAACGTCCTGGTCTATCCCGGAGTTGCCCAGTACGACAACCGATTCGACGTCCTGGCCAATGACGTGGCGGT GCGCCTTTATCCCACAAGCGATCTGGGCGATCTGCACTACCCCAAGGGCAAGGCGCCGGCGCAACTGAGCACCACCGTGG AGGCGCACGGCGATCCCGGGAACTGGCCGTTCGACTCCTACCGCACCGAGCCGATCTCCGCGGACGCGTTCGTCGGCTCC GGGGACAACCTGAAGAAGGTGCCCGCCCGGGTGGAAGTCACCGGGGCCCTGGACGGTTGGCAGATCACCGTCGACCGCGT CCGCGACCCCGCGGCGCTGCCGACGCAACGGGGCAGCGACAACGGCGACGTCGTCATCACGCTGAAGCGGGCCAAGGGGC CGCTGATCTTCGATCTCGGGATCTGCCTGGTGCTGATCAGCCTGCCCACCCTGGCGCTGCTGGTCGCGATTCCCATGGCG ATGGGCCGACGCAAATTCCTGCCGCCGTTCGCCACCTGGTACGCGGCCAACCTGTTCGCCATCGTGCCGCTGCGCAACAT CCTGCCCGGGGCGCCGCCGCCCGGGTCCTGGATCGACCAGGCGATCGTGCAGTGGGTGCTGATCGCGCTGGTGGCGGCGA TGACCCTGTACATCATCGCGTGGGTGCGGCAGGGCGACTGA
Upstream 100 bases:
>100_bases GATGCCTTGGTGGACAAGAGATTTCACCGCGCGCCGGACCCCTGCGTTCGCTAGCATCTGACGACATGTCGCACCGCGCA ACCCAAATGGTGTTGGCCTG
Downstream 100 bases:
>100_bases CCGCCGCGTACGCCAGGTGCGCCGGTTATCCACAGGTCGCGGTCCTGCCAAGCGCCCGAGTCGGCGGACAGTGCTACTCT CGCACATATGTTCGAAGACG
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTATAVAAQAPVTKKRDRPRIAIGVCILAGVVIVYVLSLFGVHFLQRSEGPLPPLDLSQGGGDATIVQLRLEELKPVANR LSVNVLVYPGVAQYDNRFDVLANDVAVRLYPTSDLGDLHYPKGKAPAQLSTTVEAHGDPGNWPFDSYRTEPISADAFVGS GDNLKKVPARVEVTGALDGWQITVDRVRDPAALPTQRGSDNGDVVITLKRAKGPLIFDLGICLVLISLPTLALLVAIPMA MGRRKFLPPFATWYAANLFAIVPLRNILPGAPPPGSWIDQAIVQWVLIALVAAMTLYIIAWVRQGD
Sequences:
>Translated_306_residues MTATAVAAQAPVTKKRDRPRIAIGVCILAGVVIVYVLSLFGVHFLQRSEGPLPPLDLSQGGGDATIVQLRLEELKPVANR LSVNVLVYPGVAQYDNRFDVLANDVAVRLYPTSDLGDLHYPKGKAPAQLSTTVEAHGDPGNWPFDSYRTEPISADAFVGS GDNLKKVPARVEVTGALDGWQITVDRVRDPAALPTQRGSDNGDVVITLKRAKGPLIFDLGICLVLISLPTLALLVAIPMA MGRRKFLPPFATWYAANLFAIVPLRNILPGAPPPGSWIDQAIVQWVLIALVAAMTLYIIAWVRQGD >Mature_305_residues TATAVAAQAPVTKKRDRPRIAIGVCILAGVVIVYVLSLFGVHFLQRSEGPLPPLDLSQGGGDATIVQLRLEELKPVANRL SVNVLVYPGVAQYDNRFDVLANDVAVRLYPTSDLGDLHYPKGKAPAQLSTTVEAHGDPGNWPFDSYRTEPISADAFVGSG DNLKKVPARVEVTGALDGWQITVDRVRDPAALPTQRGSDNGDVVITLKRAKGPLIFDLGICLVLISLPTLALLVAIPMAM GRRKFLPPFATWYAANLFAIVPLRNILPGAPPPGSWIDQAIVQWVLIALVAAMTLYIIAWVRQGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32953; Mature: 32822
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATAVAAQAPVTKKRDRPRIAIGVCILAGVVIVYVLSLFGVHFLQRSEGPLPPLDLSQG CCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GGDATIVQLRLEELKPVANRLSVNVLVYPGVAQYDNRFDVLANDVAVRLYPTSDLGDLHY CCCEEEEEEEHHHHHHHHHHEEEEEEEECCHHHHCCCHHEEECCEEEEEEECCCCCCCCC PKGKAPAQLSTTVEAHGDPGNWPFDSYRTEPISADAFVGSGDNLKKVPARVEVTGALDGW CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCC QITVDRVRDPAALPTQRGSDNGDVVITLKRAKGPLIFDLGICLVLISLPTLALLVAIPMA EEEHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH MGRRKFLPPFATWYAANLFAIVPLRNILPGAPPPGSWIDQAIVQWVLIALVAAMTLYIIA HCCCCCCCHHHHHHHHHHHHEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH WVRQGD HHHCCC >Mature Secondary Structure TATAVAAQAPVTKKRDRPRIAIGVCILAGVVIVYVLSLFGVHFLQRSEGPLPPLDLSQG CCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GGDATIVQLRLEELKPVANRLSVNVLVYPGVAQYDNRFDVLANDVAVRLYPTSDLGDLHY CCCEEEEEEEHHHHHHHHHHEEEEEEEECCHHHHCCCHHEEECCEEEEEEECCCCCCCCC PKGKAPAQLSTTVEAHGDPGNWPFDSYRTEPISADAFVGSGDNLKKVPARVEVTGALDGW CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCC QITVDRVRDPAALPTQRGSDNGDVVITLKRAKGPLIFDLGICLVLISLPTLALLVAIPMA EEEHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH MGRRKFLPPFATWYAANLFAIVPLRNILPGAPPPGSWIDQAIVQWVLIALVAAMTLYIIA HCCCCCCCHHHHHHHHHHHHEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH WVRQGD HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA