| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41410255
Identifier: 41410255
GI number: 41410255
Start: 4634592
End: 4635344
Strand: Direct
Name: 41410255
Synonym: MAP4157
Alternate gene names: NA
Gene position: 4634592-4635344 (Clockwise)
Preceding gene: 41410254
Following gene: 41410256
Centisome position: 95.96
GC content: 71.18
Gene sequence:
>753_bases GTGCTGCCGCACAGCACGGTGTCCTACGTGCCCAGCGCGGCGATCATCTGCCGGTGCTCGGCGATCCGCGAGATCGGCGG ATTCGACGAGACGCTGCAGTCCGGCGAGGACGTCGACCTGTGCTGGCGGCTGATCGAGGCGGGGGTCCGGCTGCGCTACG AGCCCATCGCCCTGGTGGGCCACGACCACCGCACCGAATTGCGGGATTGGCTTGCGCGCAAAGCGTTTTACGGCGGATCG GCGGCCCCGCTGTCGGTGCGCCACCCGGACAAGACGGCGCCGGTGGTGATCTCCGGCTGGGCGCTGATGACCTGGATCCT GATGGCCTTCGGCTCCACGCTGTCGCGGCTGGCCTCCCTGCTGCTGGCCGTCCTGACGGGCCGGCGGATCGCCCGGGCGA TGCGCAGCGCCGAGACGTCGATGACCGACGTGGTGACGGTGGCCGGCCGCGGCCTGTGGTCGGCGGCGTTGCAGCTGGCC TCGGCGCTGTGCCGGCACTACTGGCCGCTGGCGCTGCTGGCCGCCACCATGTCGCGCCATTTCAGACGGGTGGTGCTGGT GGCGGCCGTGATGGACGGGGTGGTCGACTGGCTGCGCCGCCGCGACGCCGTCGGCGACGACGTCGAACCGATCGGGCTGC CGACCTATCTGGTGCTCAAGCGGGTGGACGACCTGGCGTACGGGCTCGGGTTGTGGTGGGGTGTGCTACGGGAGCGCAAC GCGCGCGCCCTCAAACCCCAGATCCGGAGTTAG
Upstream 100 bases:
>100_bases GGTCGCGCCGCGCATCGTCGGCCTGTCGCACAGCGAGAACGTGGTGGCCCGCTACGAGGCGGTGCACTCCTCGCTCGACC TCGGTGAGCGCGAGGCGCCG
Downstream 100 bases:
>100_bases CCCCCGCCCTTGAAGAACGCCGTCTCGCACAGCGATGTGCTGATAGTCGGCGTCGGCAGCGCCGGATCGGTTGTCGCCGA ACGTCTTTCCGCTGATCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MLPHSTVSYVPSAAIICRCSAIREIGGFDETLQSGEDVDLCWRLIEAGVRLRYEPIALVGHDHRTELRDWLARKAFYGGS AAPLSVRHPDKTAPVVISGWALMTWILMAFGSTLSRLASLLLAVLTGRRIARAMRSAETSMTDVVTVAGRGLWSAALQLA SALCRHYWPLALLAATMSRHFRRVVLVAAVMDGVVDWLRRRDAVGDDVEPIGLPTYLVLKRVDDLAYGLGLWWGVLRERN ARALKPQIRS
Sequences:
>Translated_250_residues MLPHSTVSYVPSAAIICRCSAIREIGGFDETLQSGEDVDLCWRLIEAGVRLRYEPIALVGHDHRTELRDWLARKAFYGGS AAPLSVRHPDKTAPVVISGWALMTWILMAFGSTLSRLASLLLAVLTGRRIARAMRSAETSMTDVVTVAGRGLWSAALQLA SALCRHYWPLALLAATMSRHFRRVVLVAAVMDGVVDWLRRRDAVGDDVEPIGLPTYLVLKRVDDLAYGLGLWWGVLRERN ARALKPQIRS >Mature_250_residues MLPHSTVSYVPSAAIICRCSAIREIGGFDETLQSGEDVDLCWRLIEAGVRLRYEPIALVGHDHRTELRDWLARKAFYGGS AAPLSVRHPDKTAPVVISGWALMTWILMAFGSTLSRLASLLLAVLTGRRIARAMRSAETSMTDVVTVAGRGLWSAALQLA SALCRHYWPLALLAATMSRHFRRVVLVAAVMDGVVDWLRRRDAVGDDVEPIGLPTYLVLKRVDDLAYGLGLWWGVLRERN ARALKPQIRS
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 27685; Mature: 27685
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPHSTVSYVPSAAIICRCSAIREIGGFDETLQSGEDVDLCWRLIEAGVRLRYEPIALVG CCCCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHCEEECCEEEEC HDHRTELRDWLARKAFYGGSAAPLSVRHPDKTAPVVISGWALMTWILMAFGSTLSRLASL CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH LLAVLTGRRIARAMRSAETSMTDVVTVAGRGLWSAALQLASALCRHYWPLALLAATMSRH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRRVVLVAAVMDGVVDWLRRRDAVGDDVEPIGLPTYLVLKRVDDLAYGLGLWWGVLRERN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC ARALKPQIRS CHHCCCCCCC >Mature Secondary Structure MLPHSTVSYVPSAAIICRCSAIREIGGFDETLQSGEDVDLCWRLIEAGVRLRYEPIALVG CCCCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHCEEECCEEEEC HDHRTELRDWLARKAFYGGSAAPLSVRHPDKTAPVVISGWALMTWILMAFGSTLSRLASL CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH LLAVLTGRRIARAMRSAETSMTDVVTVAGRGLWSAALQLASALCRHYWPLALLAATMSRH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRRVVLVAAVMDGVVDWLRRRDAVGDDVEPIGLPTYLVLKRVDDLAYGLGLWWGVLRERN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC ARALKPQIRS CHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7836301 [H]