Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41410250

Identifier: 41410250

GI number: 41410250

Start: 4630305

End: 4630634

Strand: Direct

Name: 41410250

Synonym: MAP4152

Alternate gene names: NA

Gene position: 4630305-4630634 (Clockwise)

Preceding gene: 41410247

Following gene: 41410251

Centisome position: 95.87

GC content: 71.52

Gene sequence:

>330_bases
GTGCGGGGTCTACTGACCGTGCCGGCGCCCGCGCAGGCTCGCGCGGCCGGTGCCGCCTTCGATCCTGACCGCGGCTGGCG
ACTGCACCCGCAGGTGGCGGTGCGGCCGGAACCGTTCGGCGCGCTGCTCTACCACTTCGGCACCCGCAAGCTGTCGTTTC
TGAAGAACCGCACCATCCTCACGGTGGTGCAGTCGTTGGCCGAGTACCCGGATGTCCGGTGCGCATGCCGCGCGGCGGGC
ATCGACGACGCCGGGCAGGCGCCGTACCTGCACGCGCTGGGCGTGCTCGCCGACTCCAACATGCTGGTGCCCCGGGAGGA
CCATCCATGA

Upstream 100 bases:

>100_bases
CAAGACCGCAGGAAAGGCAAGGCCCCGTGGAGCACGAGACCGAAACCGACGCCCAACTCGTCACCGAGACCCTGGTCGAA
GAGGTGTCCATCGACGGCAT

Downstream 100 bases:

>100_bases
CCACAGTGGCCCCTGTGCCCCGGCTGATCGAGCAGTTCGAGCACGGCCTCGACGCGCCCATCTGCTTGACCTGGGAGCTC
ACCTACGCCTGCAACCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MRGLLTVPAPAQARAAGAAFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILTVVQSLAEYPDVRCACRAAG
IDDAGQAPYLHALGVLADSNMLVPREDHP

Sequences:

>Translated_109_residues
MRGLLTVPAPAQARAAGAAFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILTVVQSLAEYPDVRCACRAAG
IDDAGQAPYLHALGVLADSNMLVPREDHP
>Mature_109_residues
MRGLLTVPAPAQARAAGAAFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTILTVVQSLAEYPDVRCACRAAG
IDDAGQAPYLHALGVLADSNMLVPREDHP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11844; Mature: 11844

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGLLTVPAPAQARAAGAAFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTIL
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEECCCCHHHHHHHHCCHHHHHHHCCHHH
TVVQSLAEYPDVRCACRAAGIDDAGQAPYLHALGVLADSNMLVPREDHP
HHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEECCCCCCC
>Mature Secondary Structure
MRGLLTVPAPAQARAAGAAFDPDRGWRLHPQVAVRPEPFGALLYHFGTRKLSFLKNRTIL
CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEECCCCHHHHHHHHCCHHHHHHHCCHHH
TVVQSLAEYPDVRCACRAAGIDDAGQAPYLHALGVLADSNMLVPREDHP
HHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA