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The map label for this gene is ccsB [H]

Identifier: 41410122

GI number: 41410122

Start: 4484655

End: 4486295

Strand: Direct

Name: ccsB [H]

Synonym: MAP4024

Alternate gene names: 41410122

Gene position: 4484655-4486295 (Clockwise)

Preceding gene: 41410121

Following gene: 41410123

Centisome position: 92.85

GC content: 71.91

Gene sequence:

>1641_bases
ATGGCGCTCGCCACCCTTCGCGCCACGGCCCGCAACACCTGGCGGGCGCTGACCTCGATGGGCACCGCGCTGGTGCTGCT
GTTCCTGCTCGCGCTGGGCGCCATCCCCGGCGCCCTGCTGCCGCAGCGCAACCTCAACGCCGGCAAGGTCGACGACTACC
TGAAGGCCCACCCGGTGATCGGGCCCTGGCTGGACCGGCTGCAGGCGTTCAACGTGTTCTCCAGCTTCTGGTTCACCGCC
ATCTACGTGCTGCTGTTCGTGTCGCTGGTCGGCTGCCTCACCCCGCGGATGATCGAGCACGTCCGCAGCCTGCGCGCCAC
CCCGGTGGCCGCCCCGCGCAACCTGGCCCGGCTGCCCAAGTACGCCGGCCACCGCATCGCCGCCGACGCCGAAGACCTGA
ACACCCTGGCCAACACCCTTGTCGGCCGGCTGCGCGGCTGGCGCACCGCCATCCGCCACCACGACGGCGCCGGCCCCGAC
GCCGTGGAGGTCTCCGCCGAGAAGGGCTACCTGCGCGAATTCGGCAACATCGTGTTCCACTTTTCGCTGCTGGGCCTGCT
GGTCGCGGTGGCCGTCGGCAAGCTGTTCGGCTACGAGGGCAACGTCATCGTCATCGCCGACGGCGGCCCCGGCTTCTGCT
CGGCCTCGCCGGCCGCGTTCGACTCGTTCCGGGCCGGCAACACCGTCGACGGCACCTCGCTGCACCCGCTGTGCATCCGG
GTCGACGACTTCGACGCCCACTACCTGCCGTCCGGCCAGGCCGTCTCGTTCGCCGCGAACATCGACTACCAGTCCGGCGC
CGACCTGGCCGCCAACACCTGGCGGCACTACCGGCTGCAGGTCAACCACCCGCTGCGGCTCGGCGGCGACCGGGTCTACC
TGCAGGGCCACGGCTACGCACCCACCTTCAGCGTCACCTTCCCGGACGGGCAGATCCGCACCGCGACCGTGCAGTGGCGC
CCCGACAACCCGCAAACCCTGCTGTCGTCGGGGGTGGTGCGCATCGACCCGCCCGCGGGCAGCTATCCCACCGCCGCGGA
GCGCCGCCAGCACGAGATCGCCATCCAGGGCCTGCTGGCGCCCACCGAGCAGCTGGACGGCACGCTGTTGTCGTCGCGGT
TCCCGGCGCTCAACGCGCCCGCCGTGGCCGTCGACATCTACCGCGGCGACACCGGGCTGGACACCGGGCGGCCGCAGTCG
CTGTTCACCCTGGATCCCCGGCTGATCGAGCAGCACCGGCTGACCCGGGAGAAGCGGGTCAACCTGCGCGCCGGGCAGGC
GGTCCGCATCGACCAGGGGCCCGCGGCGGGCACCGTGATCCGCTTCGACGGCGCCGTGCCGTTCGTCAACCTGCAGGTCT
CCCACGACCCGGGCCAGACCTGGGTGCTGGTGTTCGCCGTCACGATGATGGCCGGCCTGCTGGTGTCGCTGCTGGTGCGC
CGCCGCCGGGTGTGGGTCCGTCTGACACCGGACGCCGGCGGCGCGCCCGGTACGGTGAACGTCGAACTGGGCGGCCTGGC
GCGCACCGACAACTCCGGTTGGGGGGACGAGTTCGAGCGGCTGTCGCAGCGGCTGCTGGACGGACTGGCCGAGCCCGCGT
CCCGAGCGTCCCAAAGGAGTACCGAGGTGGACGTCAAATGA

Upstream 100 bases:

>100_bases
TGCTGATCACCGTCGGCGCCCTGCTGGTAACCGGGCTGTGGAACGACTTCGTCTCCTGGCTGCGCGACGCGTTCGTGTCC
GACGTGAGGCTGCCGATTTG

Downstream 100 bases:

>100_bases
ATACCGTGCACGTCAACATCGAGCTGGCGCGCTACTCCGACTGGGCGTTCACGTCGGCGGTGGTGGCGCTGGTGATCGCG
CTGCTGCTGCTGGCCTTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 545

Protein sequence:

>546_residues
MALATLRATARNTWRALTSMGTALVLLFLLALGAIPGALLPQRNLNAGKVDDYLKAHPVIGPWLDRLQAFNVFSSFWFTA
IYVLLFVSLVGCLTPRMIEHVRSLRATPVAAPRNLARLPKYAGHRIAADAEDLNTLANTLVGRLRGWRTAIRHHDGAGPD
AVEVSAEKGYLREFGNIVFHFSLLGLLVAVAVGKLFGYEGNVIVIADGGPGFCSASPAAFDSFRAGNTVDGTSLHPLCIR
VDDFDAHYLPSGQAVSFAANIDYQSGADLAANTWRHYRLQVNHPLRLGGDRVYLQGHGYAPTFSVTFPDGQIRTATVQWR
PDNPQTLLSSGVVRIDPPAGSYPTAAERRQHEIAIQGLLAPTEQLDGTLLSSRFPALNAPAVAVDIYRGDTGLDTGRPQS
LFTLDPRLIEQHRLTREKRVNLRAGQAVRIDQGPAAGTVIRFDGAVPFVNLQVSHDPGQTWVLVFAVTMMAGLLVSLLVR
RRRVWVRLTPDAGGAPGTVNVELGGLARTDNSGWGDEFERLSQRLLDGLAEPASRASQRSTEVDVK

Sequences:

>Translated_546_residues
MALATLRATARNTWRALTSMGTALVLLFLLALGAIPGALLPQRNLNAGKVDDYLKAHPVIGPWLDRLQAFNVFSSFWFTA
IYVLLFVSLVGCLTPRMIEHVRSLRATPVAAPRNLARLPKYAGHRIAADAEDLNTLANTLVGRLRGWRTAIRHHDGAGPD
AVEVSAEKGYLREFGNIVFHFSLLGLLVAVAVGKLFGYEGNVIVIADGGPGFCSASPAAFDSFRAGNTVDGTSLHPLCIR
VDDFDAHYLPSGQAVSFAANIDYQSGADLAANTWRHYRLQVNHPLRLGGDRVYLQGHGYAPTFSVTFPDGQIRTATVQWR
PDNPQTLLSSGVVRIDPPAGSYPTAAERRQHEIAIQGLLAPTEQLDGTLLSSRFPALNAPAVAVDIYRGDTGLDTGRPQS
LFTLDPRLIEQHRLTREKRVNLRAGQAVRIDQGPAAGTVIRFDGAVPFVNLQVSHDPGQTWVLVFAVTMMAGLLVSLLVR
RRRVWVRLTPDAGGAPGTVNVELGGLARTDNSGWGDEFERLSQRLLDGLAEPASRASQRSTEVDVK
>Mature_545_residues
ALATLRATARNTWRALTSMGTALVLLFLLALGAIPGALLPQRNLNAGKVDDYLKAHPVIGPWLDRLQAFNVFSSFWFTAI
YVLLFVSLVGCLTPRMIEHVRSLRATPVAAPRNLARLPKYAGHRIAADAEDLNTLANTLVGRLRGWRTAIRHHDGAGPDA
VEVSAEKGYLREFGNIVFHFSLLGLLVAVAVGKLFGYEGNVIVIADGGPGFCSASPAAFDSFRAGNTVDGTSLHPLCIRV
DDFDAHYLPSGQAVSFAANIDYQSGADLAANTWRHYRLQVNHPLRLGGDRVYLQGHGYAPTFSVTFPDGQIRTATVQWRP
DNPQTLLSSGVVRIDPPAGSYPTAAERRQHEIAIQGLLAPTEQLDGTLLSSRFPALNAPAVAVDIYRGDTGLDTGRPQSL
FTLDPRLIEQHRLTREKRVNLRAGQAVRIDQGPAAGTVIRFDGAVPFVNLQVSHDPGQTWVLVFAVTMMAGLLVSLLVRR
RRVWVRLTPDAGGAPGTVNVELGGLARTDNSGWGDEFERLSQRLLDGLAEPASRASQRSTEVDVK

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 59216; Mature: 59085

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALATLRATARNTWRALTSMGTALVLLFLLALGAIPGALLPQRNLNAGKVDDYLKAHPVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCC
GPWLDRLQAFNVFSSFWFTAIYVLLFVSLVGCLTPRMIEHVRSLRATPVAAPRNLARLPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHCHH
YAGHRIAADAEDLNTLANTLVGRLRGWRTAIRHHDGAGPDAVEVSAEKGYLREFGNIVFH
HCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHH
FSLLGLLVAVAVGKLFGYEGNVIVIADGGPGFCSASPAAFDSFRAGNTVDGTSLHPLCIR
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEE
VDDFDAHYLPSGQAVSFAANIDYQSGADLAANTWRHYRLQVNHPLRLGGDRVYLQGHGYA
EECCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCEEEEEEECCCEEECCCEEEEEECCCC
PTFSVTFPDGQIRTATVQWRPDNPQTLLSSGVVRIDPPAGSYPTAAERRQHEIAIQGLLA
CEEEEECCCCCEEEEEEEECCCCHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHCC
PTEQLDGTLLSSRFPALNAPAVAVDIYRGDTGLDTGRPQSLFTLDPRLIEQHRLTREKRV
CHHHHCCHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHHC
NLRAGQAVRIDQGPAAGTVIRFDGAVPFVNLQVSHDPGQTWVLVFAVTMMAGLLVSLLVR
CCCCCCEEEECCCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
RRRVWVRLTPDAGGAPGTVNVELGGLARTDNSGWGDEFERLSQRLLDGLAEPASRASQRS
CCCEEEEECCCCCCCCCEEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
TEVDVK
CCCCCC
>Mature Secondary Structure 
ALATLRATARNTWRALTSMGTALVLLFLLALGAIPGALLPQRNLNAGKVDDYLKAHPVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCC
GPWLDRLQAFNVFSSFWFTAIYVLLFVSLVGCLTPRMIEHVRSLRATPVAAPRNLARLPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHCHH
YAGHRIAADAEDLNTLANTLVGRLRGWRTAIRHHDGAGPDAVEVSAEKGYLREFGNIVFH
HCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHH
FSLLGLLVAVAVGKLFGYEGNVIVIADGGPGFCSASPAAFDSFRAGNTVDGTSLHPLCIR
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEE
VDDFDAHYLPSGQAVSFAANIDYQSGADLAANTWRHYRLQVNHPLRLGGDRVYLQGHGYA
EECCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCEEEEEEECCCEEECCCEEEEEECCCC
PTFSVTFPDGQIRTATVQWRPDNPQTLLSSGVVRIDPPAGSYPTAAERRQHEIAIQGLLA
CEEEEECCCCCEEEEEEEECCCCHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHCC
PTEQLDGTLLSSRFPALNAPAVAVDIYRGDTGLDTGRPQSLFTLDPRLIEQHRLTREKRV
CHHHHCCHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHHC
NLRAGQAVRIDQGPAAGTVIRFDGAVPFVNLQVSHDPGQTWVLVFAVTMMAGLLVSLLVR
CCCCCCEEEECCCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
RRRVWVRLTPDAGGAPGTVNVELGGLARTDNSGWGDEFERLSQRLLDGLAEPASRASQRS
CCCEEEEECCCCCCCCCEEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
TEVDVK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA