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The map label for this gene is ccsB

Identifier: 41410123

GI number: 41410123

Start: 4486292

End: 4487269

Strand: Direct

Name: ccsB

Synonym: MAP4025

Alternate gene names: 41410123

Gene position: 4486292-4487269 (Clockwise)

Preceding gene: 41410122

Following gene: 41410124

Centisome position: 92.89

GC content: 70.14

Gene sequence:

>978_bases
ATGAATACCGTGCACGTCAACATCGAGCTGGCGCGCTACTCCGACTGGGCGTTCACGTCGGCGGTGGTGGCGCTGGTGAT
CGCGCTGCTGCTGCTGGCCTTCGAGCTCGCCTACGCCGGCGGACGCCGCGCCGATGCGCGGGCCCGGGTGCTGGCCGGGG
CGGTCAGCGCCGACTCGGCGACACCTGGGGTGGTGGACGAGGTGGCCCGCCGGCCCGTCGATGAGCGCGCCGGCCGCGCC
GGCCTGGCCGTGGTGTACCTGGGCACCGGCCTGCTGCTGGCCTGCCTGGTGCTGCGCGGCCTGGCCACCCTGCGGGTGCC
GTGGGGCAACATGTACGAGTTCATCAACCTGACCTGCCTGTGCGGGTTGGTCGCCGGGGCGATCGTGTTGCGCCGCCCGC
AGTACCGCCCGCTGTGGGTGTTCCTGCTGCTGCCGGTGCTGATTCTGCTCACGGTGTCCGGGCGCTGGCTCTACACCAAC
GCCGCGCCGGTGATGCCCGCGCTGCAGTCCTACTGGCTGCCCATCCACGTGTCGGTGGTCAGCCTGGGCTCCGGGGTGTT
CCTGGTCGCCGGCATCGCCAGCATCCTGTTCCTGCTGCGCACCTCGCCGCTGGGCGACCCCGGCAACGACAGCGCGCCGG
CCCGGCTGGTGCGGCGGTTCCCGGACGCGCAGACCCTGGACCGCATCGCCTACCGGACCACCATCTTCGCGTTCCCGGTG
TTCGGCTTCGGCGTCATCTTCGGCGCCATCTGGGCCGAAGAAGCCTGGGGCCGGTACTGGGGCTGGGACCCCAAGGAGAC
GGTGTCCTTCGTCGCCTGGGTGATCTACGCCGCCTACCTGCATGCCAGGTCGACGGCCGGATGGCGGGACCGCAAGGCCG
CCTGGATCAACGTCGCGGGGTTCGTGGCCATGGTCTTCAATTTGTTCTTCGTTAACCTGGTCACCGTGGGTCTGCATTCC
TATGCGGGCGTGGGTTGA

Upstream 100 bases:

>100_bases
GTTGGGGGGACGAGTTCGAGCGGCTGTCGCAGCGGCTGCTGGACGGACTGGCCGAGCCCGCGTCCCGAGCGTCCCAAAGG
AGTACCGAGGTGGACGTCAA

Downstream 100 bases:

>100_bases
CATTGGATAACCGAGGTAACTAGCGCACAACAAGGGGGAGTGCCGTGTCCGAGCATCCGACGGCGGGCGTGGGGGCGCCC
GAAGAACAGACAACGCAAAT

Product: CcsB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MNTVHVNIELARYSDWAFTSAVVALVIALLLLAFELAYAGGRRADARARVLAGAVSADSATPGVVDEVARRPVDERAGRA
GLAVVYLGTGLLLACLVLRGLATLRVPWGNMYEFINLTCLCGLVAGAIVLRRPQYRPLWVFLLLPVLILLTVSGRWLYTN
AAPVMPALQSYWLPIHVSVVSLGSGVFLVAGIASILFLLRTSPLGDPGNDSAPARLVRRFPDAQTLDRIAYRTTIFAFPV
FGFGVIFGAIWAEEAWGRYWGWDPKETVSFVAWVIYAAYLHARSTAGWRDRKAAWINVAGFVAMVFNLFFVNLVTVGLHS
YAGVG

Sequences:

>Translated_325_residues
MNTVHVNIELARYSDWAFTSAVVALVIALLLLAFELAYAGGRRADARARVLAGAVSADSATPGVVDEVARRPVDERAGRA
GLAVVYLGTGLLLACLVLRGLATLRVPWGNMYEFINLTCLCGLVAGAIVLRRPQYRPLWVFLLLPVLILLTVSGRWLYTN
AAPVMPALQSYWLPIHVSVVSLGSGVFLVAGIASILFLLRTSPLGDPGNDSAPARLVRRFPDAQTLDRIAYRTTIFAFPV
FGFGVIFGAIWAEEAWGRYWGWDPKETVSFVAWVIYAAYLHARSTAGWRDRKAAWINVAGFVAMVFNLFFVNLVTVGLHS
YAGVG
>Mature_325_residues
MNTVHVNIELARYSDWAFTSAVVALVIALLLLAFELAYAGGRRADARARVLAGAVSADSATPGVVDEVARRPVDERAGRA
GLAVVYLGTGLLLACLVLRGLATLRVPWGNMYEFINLTCLCGLVAGAIVLRRPQYRPLWVFLLLPVLILLTVSGRWLYTN
AAPVMPALQSYWLPIHVSVVSLGSGVFLVAGIASILFLLRTSPLGDPGNDSAPARLVRRFPDAQTLDRIAYRTTIFAFPV
FGFGVIFGAIWAEEAWGRYWGWDPKETVSFVAWVIYAAYLHARSTAGWRDRKAAWINVAGFVAMVFNLFFVNLVTVGLHS
YAGVG

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 35430; Mature: 35430

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTVHVNIELARYSDWAFTSAVVALVIALLLLAFELAYAGGRRADARARVLAGAVSADSA
CCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
TPGVVDEVARRPVDERAGRAGLAVVYLGTGLLLACLVLRGLATLRVPWGNMYEFINLTCL
CCCHHHHHHHCCHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHH
CGLVAGAIVLRRPQYRPLWVFLLLPVLILLTVSGRWLYTNAAPVMPALQSYWLPIHVSVV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCHHEEEEEE
SLGSGVFLVAGIASILFLLRTSPLGDPGNDSAPARLVRRFPDAQTLDRIAYRTTIFAFPV
HHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
FGFGVIFGAIWAEEAWGRYWGWDPKETVSFVAWVIYAAYLHARSTAGWRDRKAAWINVAG
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
FVAMVFNLFFVNLVTVGLHSYAGVG
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNTVHVNIELARYSDWAFTSAVVALVIALLLLAFELAYAGGRRADARARVLAGAVSADSA
CCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
TPGVVDEVARRPVDERAGRAGLAVVYLGTGLLLACLVLRGLATLRVPWGNMYEFINLTCL
CCCHHHHHHHCCHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHH
CGLVAGAIVLRRPQYRPLWVFLLLPVLILLTVSGRWLYTNAAPVMPALQSYWLPIHVSVV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCHHEEEEEE
SLGSGVFLVAGIASILFLLRTSPLGDPGNDSAPARLVRRFPDAQTLDRIAYRTTIFAFPV
HHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
FGFGVIFGAIWAEEAWGRYWGWDPKETVSFVAWVIYAAYLHARSTAGWRDRKAAWINVAG
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
FVAMVFNLFFVNLVTVGLHSYAGVG
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]