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The map label for this gene is 41409990

Identifier: 41409990

GI number: 41409990

Start: 4355768

End: 4356679

Strand: Direct

Name: 41409990

Synonym: MAP3892

Alternate gene names: NA

Gene position: 4355768-4356679 (Clockwise)

Preceding gene: 41409989

Following gene: 41409994

Centisome position: 90.19

GC content: 73.03

Gene sequence:

>912_bases
GTGCACAGCCGCAGTCGCGGTCGCCGCCGGCGTGCCAGGGTTTCTCGTATGGGGGAGACGCCGGTCGTCGGCAGCGAGGA
ACTGGCGTCCGGGCGGCTGAACCGTCACCGGCTGCGGGTGGCCTACCGTCCGGTGTTCCCGAATGTCTACCTGCCCGCGC
AGGTCGAGCCGACGCTGCCGCTTCGCATCCGCGCGGCCTGGCTGTGGTCGGGGCGGACGGCGGTCATCGCCGGCGCGGCC
GCGGCGGCGGTGCACGGCGCCGCGTGGATCCCCGATGCTGTCCCGATCGAGTTGATCCACCACAACACTCGTGCCCCCGA
CGGGGTGCTGATCCGGCGCGACGGCCTGTGCCCCGGCGAAACGCAGATCTGCGACGGGCTCGCCGTCACCACACCGGAGC
GAACCGCCTTCGACATCGGGCGACGGGGTGCCGTCCGCTCGGCCGTGGTCCGGCTCGACTCGCTGGCGCGCGCAACGGGT
TTCAAGGCCGACGACGTGTTGCGGGTGGCCGGGGCGCACCCGCGCTCGCCCGGGCTGCGGCGCCTGGAGGCGGCGCTGGG
CCTCGTCGACCCCGGTGCGCAGTCACCGCGGGAGAGCTACCTGCGGCTGCTGCTCATCGACGCGGGTCTGCCCCGGCCGC
AGACCCAGGTCCCGGTGCCGGGCGCCGACGGCATGCCCGTCGCGTACCTGGACATGGGCTGGCCCGAGTGGATGGTCGCC
GTCGAATACGACGGCGACCACCATCGCACCGACCGGCGCCAGTACGTCAAGGACATTCGCCGGCTGGAGATGCTCGAGCA
GCTGGGCTGGGTCATCGTCCGGGTGGTCGCAGAGGACCGGCCGGCGGACATCGTCCGCCGCGTCCGCGCGGCACTGGCGA
AATCCGGTGTTGCGCCTCGGCTTTCAGTGTGA

Upstream 100 bases:

>100_bases
CATCAGCGGGCAGCGCGTCGACGGCAAGTTCGTGCGGCGGGTCATCGACACCCTGATCCTGCCCGCCGTGCGGGCGGCAC
CCGAATAGCTATCGCGGCCT

Downstream 100 bases:

>100_bases
GGTGTCGGCTTTCGGTGTTGCGGTACGGCTTTCGGTGTTGCGCTACGGCTTTCGGTGTTGCACCAGGGCGCGGATCGTCG
GCGTGTCGCCGCCCTGTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MHSRSRGRRRRARVSRMGETPVVGSEELASGRLNRHRLRVAYRPVFPNVYLPAQVEPTLPLRIRAAWLWSGRTAVIAGAA
AAAVHGAAWIPDAVPIELIHHNTRAPDGVLIRRDGLCPGETQICDGLAVTTPERTAFDIGRRGAVRSAVVRLDSLARATG
FKADDVLRVAGAHPRSPGLRRLEAALGLVDPGAQSPRESYLRLLLIDAGLPRPQTQVPVPGADGMPVAYLDMGWPEWMVA
VEYDGDHHRTDRRQYVKDIRRLEMLEQLGWVIVRVVAEDRPADIVRRVRAALAKSGVAPRLSV

Sequences:

>Translated_303_residues
MHSRSRGRRRRARVSRMGETPVVGSEELASGRLNRHRLRVAYRPVFPNVYLPAQVEPTLPLRIRAAWLWSGRTAVIAGAA
AAAVHGAAWIPDAVPIELIHHNTRAPDGVLIRRDGLCPGETQICDGLAVTTPERTAFDIGRRGAVRSAVVRLDSLARATG
FKADDVLRVAGAHPRSPGLRRLEAALGLVDPGAQSPRESYLRLLLIDAGLPRPQTQVPVPGADGMPVAYLDMGWPEWMVA
VEYDGDHHRTDRRQYVKDIRRLEMLEQLGWVIVRVVAEDRPADIVRRVRAALAKSGVAPRLSV
>Mature_303_residues
MHSRSRGRRRRARVSRMGETPVVGSEELASGRLNRHRLRVAYRPVFPNVYLPAQVEPTLPLRIRAAWLWSGRTAVIAGAA
AAAVHGAAWIPDAVPIELIHHNTRAPDGVLIRRDGLCPGETQICDGLAVTTPERTAFDIGRRGAVRSAVVRLDSLARATG
FKADDVLRVAGAHPRSPGLRRLEAALGLVDPGAQSPRESYLRLLLIDAGLPRPQTQVPVPGADGMPVAYLDMGWPEWMVA
VEYDGDHHRTDRRQYVKDIRRLEMLEQLGWVIVRVVAEDRPADIVRRVRAALAKSGVAPRLSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011335 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33354; Mature: 33354

Theoretical pI: Translated: 11.37; Mature: 11.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSRSRGRRRRARVSRMGETPVVGSEELASGRLNRHRLRVAYRPVFPNVYLPAQVEPTLP
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEEEEEECCCCCEEECCCCCCCCC
LRIRAAWLWSGRTAVIAGAAAAAVHGAAWIPDAVPIELIHHNTRAPDGVLIRRDGLCPGE
EEEEEEEEECCCEEEEEHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCC
TQICDGLAVTTPERTAFDIGRRGAVRSAVVRLDSLARATGFKADDVLRVAGAHPRSPGLR
HHHHCCEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHH
RLEAALGLVDPGAQSPRESYLRLLLIDAGLPRPQTQVPVPGADGMPVAYLDMGWPEWMVA
HHHHHHCCCCCCCCCHHHHHEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEE
VEYDGDHHRTDRRQYVKDIRRLEMLEQLGWVIVRVVAEDRPADIVRRVRAALAKSGVAPR
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCHHHHHHHHHHHHHCCCCCC
LSV
CCC
>Mature Secondary Structure
MHSRSRGRRRRARVSRMGETPVVGSEELASGRLNRHRLRVAYRPVFPNVYLPAQVEPTLP
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCEEEEEEEECCCCCEEECCCCCCCCC
LRIRAAWLWSGRTAVIAGAAAAAVHGAAWIPDAVPIELIHHNTRAPDGVLIRRDGLCPGE
EEEEEEEEECCCEEEEEHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCC
TQICDGLAVTTPERTAFDIGRRGAVRSAVVRLDSLARATGFKADDVLRVAGAHPRSPGLR
HHHHCCEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHH
RLEAALGLVDPGAQSPRESYLRLLLIDAGLPRPQTQVPVPGADGMPVAYLDMGWPEWMVA
HHHHHHCCCCCCCCCHHHHHEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEE
VEYDGDHHRTDRRQYVKDIRRLEMLEQLGWVIVRVVAEDRPADIVRRVRAALAKSGVAPR
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCHHHHHHHHHHHHHCCCCCC
LSV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]