| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is mutT3
Identifier: 41409994
GI number: 41409994
Start: 4361622
End: 4362263
Strand: Direct
Name: mutT3
Synonym: MAP3896
Alternate gene names: 41409994
Gene position: 4361622-4362263 (Clockwise)
Preceding gene: 41409990
Following gene: 41409996
Centisome position: 90.31
GC content: 74.92
Gene sequence:
>642_bases GTGCACGGCGACGGTGACGGGTGGGTGATCTCCGAGCGCGGCGCCCACTACTGGGGTCGGTACGGCGCCGCCGGTTTGCT GCTGCGCGCCCCGCAACCCGACGGTACGCCCGCCGTGCTGCTGCAGCACCGCGCGGTGTGGAGCCATCAGGGCGGCACCT GGGGACTGCCCGGCGGCGCCCGGGACAGCCACGAGACACCCGAGGAGACCGCGGTCCGCGAAGCGAACGAGGAGGCCGGC CTGCTGGTCGACCGGCTCGCCGTGCGCGCCAGCGTGGTGACGGCCGAGGTCGCCGGGGTGGGCGGCACCCGGTGGAGCTA CACCACCGTGATCGCGGACGCCGACGAACTGCTGCACACCGTGCCCAACCGGGAAAGCGCCGAGATGCGCTGGGTCGCCG AGGACGAGGTGGCCGACCTGCCGCTGCACCCCGGCTTCGCGGCCAGCTGGCACCGGCTGCGCACCGAGCCCGCCCGGCTG CCGCTGAGCCACGGCGACGAACGCCGGCAGTACCTGCCCCGCACCATCGAGCTGGAGGACGGCGTCTTCGTCTGGTGCAT GCCCGGCGACCCGGCCGACACCGACGAGGCGTCCGCGCAGCTGTGCCGCCGGATCAGCGCGCTGCTGCCAGCGCCGAGCT GA
Upstream 100 bases:
>100_bases TATAAGCGAAGTCTAAGAGCATGTTCGGGTGGATGGGTGGAGGCGAAGCAATTGACGACGTGCCAGGGAACAAAGAACTA AGTCTGCCTATCCTGAACTC
Downstream 100 bases:
>100_bases GCCGCCGGGCCGCCGCGGCGGGGTCGTCCGCCGCGGTGATCGCCCGCACCACCACGACCCGGCGGGCCCCGGCGTCGAGC ACCTCGGGCAGCCGCTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: 7,8-dihydro-8-oxoguanine-triphosphatase; 8-oxo-dGTPase; dGTP pyrophosphohydrolase [H]
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MHGDGDGWVISERGAHYWGRYGAAGLLLRAPQPDGTPAVLLQHRAVWSHQGGTWGLPGGARDSHETPEETAVREANEEAG LLVDRLAVRASVVTAEVAGVGGTRWSYTTVIADADELLHTVPNRESAEMRWVAEDEVADLPLHPGFAASWHRLRTEPARL PLSHGDERRQYLPRTIELEDGVFVWCMPGDPADTDEASAQLCRRISALLPAPS
Sequences:
>Translated_213_residues MHGDGDGWVISERGAHYWGRYGAAGLLLRAPQPDGTPAVLLQHRAVWSHQGGTWGLPGGARDSHETPEETAVREANEEAG LLVDRLAVRASVVTAEVAGVGGTRWSYTTVIADADELLHTVPNRESAEMRWVAEDEVADLPLHPGFAASWHRLRTEPARL PLSHGDERRQYLPRTIELEDGVFVWCMPGDPADTDEASAQLCRRISALLPAPS >Mature_213_residues MHGDGDGWVISERGAHYWGRYGAAGLLLRAPQPDGTPAVLLQHRAVWSHQGGTWGLPGGARDSHETPEETAVREANEEAG LLVDRLAVRASVVTAEVAGVGGTRWSYTTVIADADELLHTVPNRESAEMRWVAEDEVADLPLHPGFAASWHRLRTEPARL PLSHGDERRQYLPRTIELEDGVFVWCMPGDPADTDEASAQLCRRISALLPAPS
Specific function: May be involved in the GO system responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8- oxoguanine, 8-oxo-dGTP) from DNA and the nucleotide pool. 8-oxo- dGTP is inserted opposite dA and dC residues of template DNA with almost equa
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: NA
Molecular weight: Translated: 23221; Mature: 23221
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGDGDGWVISERGAHYWGRYGAAGLLLRAPQPDGTPAVLLQHRAVWSHQGGTWGLPGGA CCCCCCCEEEECCCCCHHHCCCCCEEEEECCCCCCCHHEEEEHHHHHCCCCCCCCCCCCC RDSHETPEETAVREANEEAGLLVDRLAVRASVVTAEVAGVGGTRWSYTTVIADADELLHT CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHH VPNRESAEMRWVAEDEVADLPLHPGFAASWHRLRTEPARLPLSHGDERRQYLPRTIELED CCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHCCCEEEECC GVFVWCMPGDPADTDEASAQLCRRISALLPAPS CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHGDGDGWVISERGAHYWGRYGAAGLLLRAPQPDGTPAVLLQHRAVWSHQGGTWGLPGGA CCCCCCCEEEECCCCCHHHCCCCCEEEEECCCCCCCHHEEEEHHHHHCCCCCCCCCCCCC RDSHETPEETAVREANEEAGLLVDRLAVRASVVTAEVAGVGGTRWSYTTVIADADELLHT CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHH VPNRESAEMRWVAEDEVADLPLHPGFAASWHRLRTEPARLPLSHGDERRQYLPRTIELED CCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHCCCEEEECC GVFVWCMPGDPADTDEASAQLCRRISALLPAPS CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]