| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41409966
Identifier: 41409966
GI number: 41409966
Start: 4329372
End: 4330313
Strand: Direct
Name: 41409966
Synonym: MAP3868
Alternate gene names: NA
Gene position: 4329372-4330313 (Clockwise)
Preceding gene: 41409962
Following gene: 41409967
Centisome position: 89.64
GC content: 71.55
Gene sequence:
>942_bases TTGCTGAGGACGCCGCTGTGCCGCGCCGGCGCCGTGCTGGCGTCGGTCGTGCTGCTGTGCAGCGCTTCGGCGACCGCCTC GGCCGACGAGTCGATCGTGATCGACCTGGTGCGCCACGGGCAGTCGGTGGCCAACGCGGCGGGACTGATCGACACGGCGG TGCCCGGCGCATCCCTCACCCAGCTCGGTCAGCAACAGGCGCAGACCGTCGCCGGCGTTCTGGCGGCGCGGGGCCCGGTC GCCGCGATCTTCGCCTCGCAGCTGATCAGGACGCAGCAGACCGCGGCGCCGCTGGCCACCGCATTGGGCATGAACGTCCA AGTGCTGCCGGGGCTCAACGAGATCGACGCCGGCATCTTCAACGGCCAGCCGCAGTTCAGCCTCGGCGGGCTGGCCTACC TCTTGGCGCCGATCGCGTGGATGCTCGGGCTGCGCATCGTGCCGATGCTGGCTCCCGGCTCCGCGGACGCCAACGGGTAC GAGTTCCGCCGGCGCTTCGACGGCGCGCTGCAAACCGTGTACGGCAGCGCCGCGGCCAACGCCGGCGGCTTCGGTGACGT GCTTCAGGCGGTGTACGCCGGGGCGGTGACGAACCCGGTCCGCGCCGCCAACGGCCGGATCACCGGGGTGGCGTTCTCCA GCGAGTTCGCCATCGGCGTCGGGACGATGATGACCGTCAAGAACCCCGATCCGTTGCTGCTGCTCTTCGACCCGCTGCCC AACACGGGCATCGTGGTCATCCAGGGCAGCCCCCGCGACGGCTGGACGCTGATCAGCTGGAACGGCAAACCCGTGCATCC GGGGTGGTCGGCCACCCGGAATGGTCGCGGCGCCAATGGCCTGTGCCTGATGCTGGACCCGTCCACCCCGACCGGCGTGT GCGCGGCCAAACCGCCCGGGCCGGCGAGCGCCCCGGTCACGGCGCGTCCTGGCTTAAGCTGA
Upstream 100 bases:
>100_bases CCACGAGTGGTTTAGCGGAACGGAGCACCACCATTCCTCGACCAACCGCCATCTTGTCGATCGCGCCGACCGCGTCGGGC GCCGGCCCCACCCGCGTCCG
Downstream 100 bases:
>100_bases TTTGCCCGGCTCCTGCGCCGGCCATCGGCGGCCCGCCTCGCCGCCAGGCTAGGGTGGGTCACCGGCTGGACCACAATACG CAGGCGAGATCAGGGTTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphoglycerate Mutase Family Protein; PE-PGRS Family Protein; Lipoprotein LpqD; Isomerase; Fructose-2 6-Bisphosphatase; Alpha-Ribazole Phosphatase; 2 3-PDG Dependent Phosphoglycerate Mutase
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MLRTPLCRAGAVLASVVLLCSASATASADESIVIDLVRHGQSVANAAGLIDTAVPGASLTQLGQQQAQTVAGVLAARGPV AAIFASQLIRTQQTAAPLATALGMNVQVLPGLNEIDAGIFNGQPQFSLGGLAYLLAPIAWMLGLRIVPMLAPGSADANGY EFRRRFDGALQTVYGSAAANAGGFGDVLQAVYAGAVTNPVRAANGRITGVAFSSEFAIGVGTMMTVKNPDPLLLLFDPLP NTGIVVIQGSPRDGWTLISWNGKPVHPGWSATRNGRGANGLCLMLDPSTPTGVCAAKPPGPASAPVTARPGLS
Sequences:
>Translated_313_residues MLRTPLCRAGAVLASVVLLCSASATASADESIVIDLVRHGQSVANAAGLIDTAVPGASLTQLGQQQAQTVAGVLAARGPV AAIFASQLIRTQQTAAPLATALGMNVQVLPGLNEIDAGIFNGQPQFSLGGLAYLLAPIAWMLGLRIVPMLAPGSADANGY EFRRRFDGALQTVYGSAAANAGGFGDVLQAVYAGAVTNPVRAANGRITGVAFSSEFAIGVGTMMTVKNPDPLLLLFDPLP NTGIVVIQGSPRDGWTLISWNGKPVHPGWSATRNGRGANGLCLMLDPSTPTGVCAAKPPGPASAPVTARPGLS >Mature_313_residues MLRTPLCRAGAVLASVVLLCSASATASADESIVIDLVRHGQSVANAAGLIDTAVPGASLTQLGQQQAQTVAGVLAARGPV AAIFASQLIRTQQTAAPLATALGMNVQVLPGLNEIDAGIFNGQPQFSLGGLAYLLAPIAWMLGLRIVPMLAPGSADANGY EFRRRFDGALQTVYGSAAANAGGFGDVLQAVYAGAVTNPVRAANGRITGVAFSSEFAIGVGTMMTVKNPDPLLLLFDPLP NTGIVVIQGSPRDGWTLISWNGKPVHPGWSATRNGRGANGLCLMLDPSTPTGVCAAKPPGPASAPVTARPGLS
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31770; Mature: 31770
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRTPLCRAGAVLASVVLLCSASATASADESIVIDLVRHGQSVANAAGLIDTAVPGASLT CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHH QLGQQQAQTVAGVLAARGPVAAIFASQLIRTQQTAAPLATALGMNVQVLPGLNEIDAGIF HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHCCCEE NGQPQFSLGGLAYLLAPIAWMLGLRIVPMLAPGSADANGYEFRRRFDGALQTVYGSAAAN CCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC AGGFGDVLQAVYAGAVTNPVRAANGRITGVAFSSEFAIGVGTMMTVKNPDPLLLLFDPLP CCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCEEEEECCCC NTGIVVIQGSPRDGWTLISWNGKPVHPGWSATRNGRGANGLCLMLDPSTPTGVCAAKPPG CCCEEEEECCCCCCCEEEEECCEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCC PASAPVTARPGLS CCCCCCCCCCCCC >Mature Secondary Structure MLRTPLCRAGAVLASVVLLCSASATASADESIVIDLVRHGQSVANAAGLIDTAVPGASLT CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHH QLGQQQAQTVAGVLAARGPVAAIFASQLIRTQQTAAPLATALGMNVQVLPGLNEIDAGIF HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHCCCEE NGQPQFSLGGLAYLLAPIAWMLGLRIVPMLAPGSADANGYEFRRRFDGALQTVYGSAAAN CCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC AGGFGDVLQAVYAGAVTNPVRAANGRITGVAFSSEFAIGVGTMMTVKNPDPLLLLFDPLP CCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCEEEEECCCC NTGIVVIQGSPRDGWTLISWNGKPVHPGWSATRNGRGANGLCLMLDPSTPTGVCAAKPPG CCCEEEEECCCCCCCEEEEECCEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCC PASAPVTARPGLS CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA