| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409914
Identifier: 41409914
GI number: 41409914
Start: 4264949
End: 4265191
Strand: Direct
Name: 41409914
Synonym: MAP3816
Alternate gene names: NA
Gene position: 4264949-4265191 (Clockwise)
Preceding gene: 41409913
Following gene: 41409916
Centisome position: 88.31
GC content: 63.79
Gene sequence:
>243_bases CTGTCCCCGCAGCAGTCGTTCCGGTCTCTGCGCTACACGTACGCGAGCTTGTGCCTCGCTGCGCGCATCCGGCCTATCGA CATCGCGGAGCTTATGGGGCACCGGGACGTCAAGACGACGCTGACTGTCTACGCGCACCTGATCAACACTGACGATCACA CCGGCAACATGGCCGCGCTCGGGTCGCTAGCCGCCCCGTTGCAGAAGCCCAACTACGGCAATGTGATCCCGCTACACGGC TGA
Upstream 100 bases:
>100_bases TTGTAGCGGGTCGCATACCCACATCGCGGGCAAGGGAAATGGAAGTGGGGGACGCTGTGTCCCCTAACGCTCACAACCAC ATCTGCCTCCCACGATCTAG
Downstream 100 bases:
>100_bases ATCGGGCGGATTGCGGCCCCACACGGCGCGCCGATCAAGCCTCGTCTGCAGAGGAACGAAGGGTCTTCGACGCCTGACGC CTGTAGAGGCGAACCAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MSPQQSFRSLRYTYASLCLAARIRPIDIAELMGHRDVKTTLTVYAHLINTDDHTGNMAALGSLAAPLQKPNYGNVIPLHG
Sequences:
>Translated_80_residues MSPQQSFRSLRYTYASLCLAARIRPIDIAELMGHRDVKTTLTVYAHLINTDDHTGNMAALGSLAAPLQKPNYGNVIPLHG >Mature_79_residues SPQQSFRSLRYTYASLCLAARIRPIDIAELMGHRDVKTTLTVYAHLINTDDHTGNMAALGSLAAPLQKPNYGNVIPLHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8778; Mature: 8647
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPQQSFRSLRYTYASLCLAARIRPIDIAELMGHRDVKTTLTVYAHLINTDDHTGNMAAL CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHH GSLAAPLQKPNYGNVIPLHG HHHHCCCCCCCCCCEEECCC >Mature Secondary Structure SPQQSFRSLRYTYASLCLAARIRPIDIAELMGHRDVKTTLTVYAHLINTDDHTGNMAAL CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHH GSLAAPLQKPNYGNVIPLHG HHHHCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA