| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409913
Identifier: 41409913
GI number: 41409913
Start: 4262801
End: 4263655
Strand: Direct
Name: 41409913
Synonym: MAP3815
Alternate gene names: NA
Gene position: 4262801-4263655 (Clockwise)
Preceding gene: 41409911
Following gene: 41409914
Centisome position: 88.26
GC content: 57.89
Gene sequence:
>855_bases ATGTCGGTGGCCGTACCTATCGTGTCGGTCATGCCGGCTCTTGATCCTCGGGAGCGTGTAGAGAGGTTTGTTCTGCGCGC GCGAAAAGTAATGGCGCATTCTCTGGTCCGCGACCGCTCGGACCTGTTGAAAGAATTGGCCTCGGGGACGATTAAGGTGC AGATCCAAGTCGACACCGTGACCGGCGAGGCCACGCATCAGTTTTCGATGGAGTTGCCGCCTGAGGAGGCGTTCGAGTCC TTCGCGGCCAGGGTGCGGCCATTCACCATTCCCAAGGAGCCGGTCTACTGGGCGGTGGTGCTAGACGCGTTGGAAGAGCT TGTGAGCGAGGACACGCTGGCCAATATCATCGACATCGAAGATTTACGTGCGCATTGGAAGACCGTTGTAGAAGGCAAGA AGGTTGCGCAAGCCTTCTACGTGGTGACCGAGAAAGGCCAGCTCTCTGACGTCCAATTGGCCGAAATGTGGCTGAACTCT GATGCTCTCCACACACAGCTCATTCAGTCGGAGGTCGGCAAGGAACTGAGCTTGGACCAGCGCTACCGCGCGGCGACGGG TGTGTACGCCCGTCTGGGCTCCTGCGTCAACGCCACGCATTACCTGGTGAAGTATCTGGTCGAAGAAGGACTGCTTGAAC TTGATCCCGAAGTGTTTACGCTGCCGGTGTTGGCCAAGACCAGTGTCGAGATCAAGGGAGCGGTCTACAGCGCGGAATTG GGCGCTGAGATGCCCACCGATTTGTCGAACCTCGACCCCGAGGTATGGCGACCAATCCACAAAGACATTGATTTGCTAGC GAGCTCAGAACATGGGTCACCTGAAGACGGTTCGTCCCGCGAGCCAGAGGAGTGA
Upstream 100 bases:
>100_bases GGCACCTGAGACGCGCCGCGGACGACCACTCAAAAAAACAGGAATCACCACGTGTTCCGGTCGGTGGGCTCGGCAGTCCG CGGGCGCCCACTAAACCTAA
Downstream 100 bases:
>100_bases GCATGTCGGCGACCCCATGAGTTCAAAGTTCGGAGGCATCCCGTTTGAAGCGGCGCCCGAACCGAGCTGGCCCTTTGGCC TGCCGACCGTAGCGGCCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MSVAVPIVSVMPALDPRERVERFVLRARKVMAHSLVRDRSDLLKELASGTIKVQIQVDTVTGEATHQFSMELPPEEAFES FAARVRPFTIPKEPVYWAVVLDALEELVSEDTLANIIDIEDLRAHWKTVVEGKKVAQAFYVVTEKGQLSDVQLAEMWLNS DALHTQLIQSEVGKELSLDQRYRAATGVYARLGSCVNATHYLVKYLVEEGLLELDPEVFTLPVLAKTSVEIKGAVYSAEL GAEMPTDLSNLDPEVWRPIHKDIDLLASSEHGSPEDGSSREPEE
Sequences:
>Translated_284_residues MSVAVPIVSVMPALDPRERVERFVLRARKVMAHSLVRDRSDLLKELASGTIKVQIQVDTVTGEATHQFSMELPPEEAFES FAARVRPFTIPKEPVYWAVVLDALEELVSEDTLANIIDIEDLRAHWKTVVEGKKVAQAFYVVTEKGQLSDVQLAEMWLNS DALHTQLIQSEVGKELSLDQRYRAATGVYARLGSCVNATHYLVKYLVEEGLLELDPEVFTLPVLAKTSVEIKGAVYSAEL GAEMPTDLSNLDPEVWRPIHKDIDLLASSEHGSPEDGSSREPEE >Mature_283_residues SVAVPIVSVMPALDPRERVERFVLRARKVMAHSLVRDRSDLLKELASGTIKVQIQVDTVTGEATHQFSMELPPEEAFESF AARVRPFTIPKEPVYWAVVLDALEELVSEDTLANIIDIEDLRAHWKTVVEGKKVAQAFYVVTEKGQLSDVQLAEMWLNSD ALHTQLIQSEVGKELSLDQRYRAATGVYARLGSCVNATHYLVKYLVEEGLLELDPEVFTLPVLAKTSVEIKGAVYSAELG AEMPTDLSNLDPEVWRPIHKDIDLLASSEHGSPEDGSSREPEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31635; Mature: 31504
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVAVPIVSVMPALDPRERVERFVLRARKVMAHSLVRDRSDLLKELASGTIKVQIQVDTV CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEE TGEATHQFSMELPPEEAFESFAARVRPFTIPKEPVYWAVVLDALEELVSEDTLANIIDIE CCCCHHEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DLRAHWKTVVEGKKVAQAFYVVTEKGQLSDVQLAEMWLNSDALHTQLIQSEVGKELSLDQ HHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHH RYRAATGVYARLGSCVNATHYLVKYLVEEGLLELDPEVFTLPVLAKTSVEIKGAVYSAEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCEEEEEEEEECCEEEECEEEEHHH GAEMPTDLSNLDPEVWRPIHKDIDLLASSEHGSPEDGSSREPEE CCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVAVPIVSVMPALDPRERVERFVLRARKVMAHSLVRDRSDLLKELASGTIKVQIQVDTV CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEE TGEATHQFSMELPPEEAFESFAARVRPFTIPKEPVYWAVVLDALEELVSEDTLANIIDIE CCCCHHEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DLRAHWKTVVEGKKVAQAFYVVTEKGQLSDVQLAEMWLNSDALHTQLIQSEVGKELSLDQ HHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHH RYRAATGVYARLGSCVNATHYLVKYLVEEGLLELDPEVFTLPVLAKTSVEIKGAVYSAEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCEEEEEEEEECCEEEECEEEEHHH GAEMPTDLSNLDPEVWRPIHKDIDLLASSEHGSPEDGSSREPEE CCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA