| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409851
Identifier: 41409851
GI number: 41409851
Start: 4191363
End: 4192715
Strand: Direct
Name: 41409851
Synonym: MAP3753
Alternate gene names: NA
Gene position: 4191363-4192715 (Clockwise)
Preceding gene: 41409850
Following gene: 41409852
Centisome position: 86.78
GC content: 61.86
Gene sequence:
>1353_bases GTGGCGCATCCGGGCGGTGCCATTCCGGACAATCGGCTCGCGTTCACCGATCAGATGTCGTTTCTCTCGGTGCGCGCTAC CGGACAGGGGACGGTCGCTCAGTGTGTGTGGATTTATGAGCGGACCGTCGATTTCGAAGGCCTGCGACGCTTCCACCGCA ATCTGGATCTCGGGTTGTTGGGTCGACGAATAGAACGTTCTCCGCTGCCGTTCGGCCGTGATCGGTGGGTTTCCTCTCCC CCCTCCGTGGACATCGAAGTCGCTGAGGGCGCCCGTCCGCGCAGCGAGCTCAGCGAGTGGGCTGACGAACGTGGACGACT ACCTGTTAACGCCGAACGGGGTCCCGCTTGGCATCTCGGCGTTGCGCACTTCACGGATGGCTCGACAGCGGTCAGCCTGG TTGCATCGCACTTGGTGGTGGACGGACTCGGTTTCTGCCTGGCGATCGCGGACGCCGTCAACGGGACCGCCCGCGATCTG GGCTACCCGCCGCCACGTTCACGCCACCGACTGCGTGCGGTGGTTCAGGATGCCTACCAAAGCGCGCGGGGAACACATGA GGTTGCGCGAGCACTCTTCACGGCAGTGCAAGCGGGGAGTCGTCGACGCTCCGATGTTGCGAGGGTGCGGGCGGCGCGGC CCATGCCTATTCACAGAAGCAACCCGGACGACGGCGTGATGGCACCGGCCATTACGATCTATATCGATCCGGATGAGTGG GATGCCCGAGCAAAATCACTTGGTGGAACGAGTAATTCACTCTTCGCGGGTGTCGCCGCGAAGCTCGCTGAGCACTCTGG ATGCCGGTCTGCCGATGACGGCACCGTGGCGATATCGTTCCCGGTTAGCGACCGTACCGAGGATGACATGCGTGCTAACG CATTGTCGTTTGTGATCGTCATAGTCGATCCAGCACAGGCAACAACGGATTTGCGCGGTATCCGAGGCGCGATAAGCCAG GCGCTTCAGACCCTGCAGGAAAACCCAGAGGAACTCTTGCAGGTGCTTCCGCTGGCCCCGCTGACGCCGAAACGGGTGAT GAGAAAGTTGGCCCACGTGGCGTACGGCTACACCGACGTGGGGTGCTCGGCCATTGGCGAACTCGATCCGGCGGTGGGAC GACCCGATGGTACCGACGCAGACCATGTCTTCATTCGTGGAGTACGGCAACGCTTTACGCGTCAAAACTTCGATCGCCCC CGCGGCATCTTCATGGTCTCGGGGCGGATCCGCGGACGAATGTTCATCACCATCGTGGCCTATCAGCTCGAGGGCAGGGA TTCGAAGCATCACCTGCATGAGCTGGTGGCGCAAACGCTTTCGGAGTTCGACCTGACGGGAACGATTGACTAA
Upstream 100 bases:
>100_bases CGCAATCGCTTTCATCTCAGCTGTTCTGCACGATGAAGTCAGCCAAACCCATGATTGATCTGTGGCGGTCGTGATGCCTC GGGCGCGGATATATTCGCGG
Downstream 100 bases:
>100_bases TCCTTTTCGAGAATGTACATCCGGTATGAATTGGCCTGACCCCGATCGGTTGATCCATCGCTTATGAGCGTCTTGTGGCC CAACGAGATGGGCAGGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MAHPGGAIPDNRLAFTDQMSFLSVRATGQGTVAQCVWIYERTVDFEGLRRFHRNLDLGLLGRRIERSPLPFGRDRWVSSP PSVDIEVAEGARPRSELSEWADERGRLPVNAERGPAWHLGVAHFTDGSTAVSLVASHLVVDGLGFCLAIADAVNGTARDL GYPPPRSRHRLRAVVQDAYQSARGTHEVARALFTAVQAGSRRRSDVARVRAARPMPIHRSNPDDGVMAPAITIYIDPDEW DARAKSLGGTSNSLFAGVAAKLAEHSGCRSADDGTVAISFPVSDRTEDDMRANALSFVIVIVDPAQATTDLRGIRGAISQ ALQTLQENPEELLQVLPLAPLTPKRVMRKLAHVAYGYTDVGCSAIGELDPAVGRPDGTDADHVFIRGVRQRFTRQNFDRP RGIFMVSGRIRGRMFITIVAYQLEGRDSKHHLHELVAQTLSEFDLTGTID
Sequences:
>Translated_450_residues MAHPGGAIPDNRLAFTDQMSFLSVRATGQGTVAQCVWIYERTVDFEGLRRFHRNLDLGLLGRRIERSPLPFGRDRWVSSP PSVDIEVAEGARPRSELSEWADERGRLPVNAERGPAWHLGVAHFTDGSTAVSLVASHLVVDGLGFCLAIADAVNGTARDL GYPPPRSRHRLRAVVQDAYQSARGTHEVARALFTAVQAGSRRRSDVARVRAARPMPIHRSNPDDGVMAPAITIYIDPDEW DARAKSLGGTSNSLFAGVAAKLAEHSGCRSADDGTVAISFPVSDRTEDDMRANALSFVIVIVDPAQATTDLRGIRGAISQ ALQTLQENPEELLQVLPLAPLTPKRVMRKLAHVAYGYTDVGCSAIGELDPAVGRPDGTDADHVFIRGVRQRFTRQNFDRP RGIFMVSGRIRGRMFITIVAYQLEGRDSKHHLHELVAQTLSEFDLTGTID >Mature_449_residues AHPGGAIPDNRLAFTDQMSFLSVRATGQGTVAQCVWIYERTVDFEGLRRFHRNLDLGLLGRRIERSPLPFGRDRWVSSPP SVDIEVAEGARPRSELSEWADERGRLPVNAERGPAWHLGVAHFTDGSTAVSLVASHLVVDGLGFCLAIADAVNGTARDLG YPPPRSRHRLRAVVQDAYQSARGTHEVARALFTAVQAGSRRRSDVARVRAARPMPIHRSNPDDGVMAPAITIYIDPDEWD ARAKSLGGTSNSLFAGVAAKLAEHSGCRSADDGTVAISFPVSDRTEDDMRANALSFVIVIVDPAQATTDLRGIRGAISQA LQTLQENPEELLQVLPLAPLTPKRVMRKLAHVAYGYTDVGCSAIGELDPAVGRPDGTDADHVFIRGVRQRFTRQNFDRPR GIFMVSGRIRGRMFITIVAYQLEGRDSKHHLHELVAQTLSEFDLTGTID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49215; Mature: 49084
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHPGGAIPDNRLAFTDQMSFLSVRATGQGTVAQCVWIYERTVDFEGLRRFHRNLDLGLL CCCCCCCCCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHH GRRIERSPLPFGRDRWVSSPPSVDIEVAEGARPRSELSEWADERGRLPVNAERGPAWHLG HHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEE VAHFTDGSTAVSLVASHLVVDGLGFCLAIADAVNGTARDLGYPPPRSRHRLRAVVQDAYQ EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHH SARGTHEVARALFTAVQAGSRRRSDVARVRAARPMPIHRSNPDDGVMAPAITIYIDPDEW HCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCH DARAKSLGGTSNSLFAGVAAKLAEHSGCRSADDGTVAISFPVSDRTEDDMRANALSFVIV HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHCEEEEEEE IVDPAQATTDLRGIRGAISQALQTLQENPEELLQVLPLAPLTPKRVMRKLAHVAYGYTDV EECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHH GCSAIGELDPAVGRPDGTDADHVFIRGVRQRFTRQNFDRPRGIFMVSGRIRGRMFITIVA CHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEE YQLEGRDSKHHLHELVAQTLSEFDLTGTID EEECCCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AHPGGAIPDNRLAFTDQMSFLSVRATGQGTVAQCVWIYERTVDFEGLRRFHRNLDLGLL CCCCCCCCCCCEEEECCCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHH GRRIERSPLPFGRDRWVSSPPSVDIEVAEGARPRSELSEWADERGRLPVNAERGPAWHLG HHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEE VAHFTDGSTAVSLVASHLVVDGLGFCLAIADAVNGTARDLGYPPPRSRHRLRAVVQDAYQ EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHH SARGTHEVARALFTAVQAGSRRRSDVARVRAARPMPIHRSNPDDGVMAPAITIYIDPDEW HCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCH DARAKSLGGTSNSLFAGVAAKLAEHSGCRSADDGTVAISFPVSDRTEDDMRANALSFVIV HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHCEEEEEEE IVDPAQATTDLRGIRGAISQALQTLQENPEELLQVLPLAPLTPKRVMRKLAHVAYGYTDV EECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHH GCSAIGELDPAVGRPDGTDADHVFIRGVRQRFTRQNFDRPRGIFMVSGRIRGRMFITIVA CHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEE YQLEGRDSKHHLHELVAQTLSEFDLTGTID EEECCCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA