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The map label for this gene is lpqI

Identifier: 41409786

GI number: 41409786

Start: 4101941

End: 4103107

Strand: Direct

Name: lpqI

Synonym: MAP3688

Alternate gene names: 41409786

Gene position: 4101941-4103107 (Clockwise)

Preceding gene: 41409782

Following gene: 41409787

Centisome position: 84.93

GC content: 72.41

Gene sequence:

>1167_bases
ATGGCATTGTCGCGCCCCCTCGCCGCGCACGCGGCCGTGCTGGCCGCCGTGTCGGAGCTGATGATCGGCTGCGCTCACCG
CGCCGCACCCCCGCCCGCGCACTCGTCGACGTCGAACACGCCGGCCGCTGCCCCGGCGCCGCGGGTGTGCGTCGACCCGC
CGGCAGCGCCGGCCACCCTGAACCTTCGCGACAAGCTGGCCCAACTGCTGATGGTGGGTGTCAAGAACGCCGACGACGCG
CGCAACGTCGTCAACGGCTATCACGTCGGCGGCATCTTCATCGGCAGCTGGACGGACCTGACGATCTTCCGGGGCCCGCT
GGGTGACATCGCGGCCAAGGCGGGGCCGTTGCCGCTGGCGGTCAGCGTCGACGAGGAGGGCGGCCGGGTCTCGCGGCTGA
AATCCCTGATCGGGACGTCGCCGTCGCCGCGCGAGCTGGCGCAGACGCAGACCGTGCAGCAGGTGCACGACCTGGCCGCC
GACCGCGGCAAGAAGATGCGCGACCTGGGCATCACCGTCGATTTCGCGCCCGTCGTCGACGTCAGCGACGAGCCCGACGA
CGCCGTGATCGGCAACCGTTCGTTCGGCGCGGACCCGGCCAAGGTCACCGAGTACGCCGGTGCGTATGCGCAGGGGCTGC
GCGACGCCGGGCTGTTGCCGGTGCTCAAGCACTTCCCCGGCCACGGGCACGGCTCGGGCGACTCCCACACCGGTGGCGTG
GTCACGCCGCCGTTGGACGACCTGCAGAACGACGACCTGGTGCCCTACCGGACCCTGGTGACGACGCCGCCGGTCGGGGT
GATGGTGGGCCACCTGCAGGTTCCCGGGCTCACCGGCGACGTGCCGGCCAGCCTGAGCCCCGAGGCGGTGCAGTTGCTGC
GCAACGGCGTCGGCTACAAGGGGCCGCCGTTCACCGGGCCCGTCTTCAGCGACGATCTGTCCAGCATGGCGGCCATCTCC
GACCGGTACGGGGTCTCCGAGGCGGTGCTGCGCAGCCTGCTGGCCGGCGTCGACGTCGCCTTGTGGGTCACCACCGACGA
GGTGCCGGCGGTGCTGGACCGGCTGCAGAAGGCGGTTGCCTCGGGCGAATTGCCGGCCCAGCGGGTGGACGAGTCGCTGG
TGCGGGTGGCGACCATGAAGGGCCGCGGCCCGGCCTGCGGGCACTAG

Upstream 100 bases:

>100_bases
CCCGCGTGCTGACCAGGCGCTGGTCAGCCCCCGCTCAGCAACCTACCGCCGATGCCCCCTGCGGACGGATGCGAAACGCC
CGTCGTGAAAGCATGGCCCG

Downstream 100 bases:

>100_bases
CGGCTGTGCGGCCGAACCACATTGCCTACCCTTGACTCAGAACGGACCGGCTGGAGAGGTAAGCGATGGCGGGTGGCACC
AAGCGGTTACCGCGTGCCGT

Product: LpqI

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MALSRPLAAHAAVLAAVSELMIGCAHRAAPPPAHSSTSNTPAAAPAPRVCVDPPAAPATLNLRDKLAQLLMVGVKNADDA
RNVVNGYHVGGIFIGSWTDLTIFRGPLGDIAAKAGPLPLAVSVDEEGGRVSRLKSLIGTSPSPRELAQTQTVQQVHDLAA
DRGKKMRDLGITVDFAPVVDVSDEPDDAVIGNRSFGADPAKVTEYAGAYAQGLRDAGLLPVLKHFPGHGHGSGDSHTGGV
VTPPLDDLQNDDLVPYRTLVTTPPVGVMVGHLQVPGLTGDVPASLSPEAVQLLRNGVGYKGPPFTGPVFSDDLSSMAAIS
DRYGVSEAVLRSLLAGVDVALWVTTDEVPAVLDRLQKAVASGELPAQRVDESLVRVATMKGRGPACGH

Sequences:

>Translated_388_residues
MALSRPLAAHAAVLAAVSELMIGCAHRAAPPPAHSSTSNTPAAAPAPRVCVDPPAAPATLNLRDKLAQLLMVGVKNADDA
RNVVNGYHVGGIFIGSWTDLTIFRGPLGDIAAKAGPLPLAVSVDEEGGRVSRLKSLIGTSPSPRELAQTQTVQQVHDLAA
DRGKKMRDLGITVDFAPVVDVSDEPDDAVIGNRSFGADPAKVTEYAGAYAQGLRDAGLLPVLKHFPGHGHGSGDSHTGGV
VTPPLDDLQNDDLVPYRTLVTTPPVGVMVGHLQVPGLTGDVPASLSPEAVQLLRNGVGYKGPPFTGPVFSDDLSSMAAIS
DRYGVSEAVLRSLLAGVDVALWVTTDEVPAVLDRLQKAVASGELPAQRVDESLVRVATMKGRGPACGH
>Mature_387_residues
ALSRPLAAHAAVLAAVSELMIGCAHRAAPPPAHSSTSNTPAAAPAPRVCVDPPAAPATLNLRDKLAQLLMVGVKNADDAR
NVVNGYHVGGIFIGSWTDLTIFRGPLGDIAAKAGPLPLAVSVDEEGGRVSRLKSLIGTSPSPRELAQTQTVQQVHDLAAD
RGKKMRDLGITVDFAPVVDVSDEPDDAVIGNRSFGADPAKVTEYAGAYAQGLRDAGLLPVLKHFPGHGHGSGDSHTGGVV
TPPLDDLQNDDLVPYRTLVTTPPVGVMVGHLQVPGLTGDVPASLSPEAVQLLRNGVGYKGPPFTGPVFSDDLSSMAAISD
RYGVSEAVLRSLLAGVDVALWVTTDEVPAVLDRLQKAVASGELPAQRVDESLVRVATMKGRGPACGH

Specific function: Hydrolyses the beta-1,4-glycosidic bond between N-acetylglucosamine and anhydro-N-acetylmuramic acid in cell wall degradation products following their importation into the cell during the process for recycling cell wall muropeptides [C]

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 3 family [H]

Homologues:

Organism=Escherichia coli, GI1787350, Length=281, Percent_Identity=33.4519572953737, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019800
- InterPro:   IPR002772
- InterPro:   IPR001764
- InterPro:   IPR017853 [H]

Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]

EC number: 3.2.1.21

Molecular weight: Translated: 40137; Mature: 40006

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSRPLAAHAAVLAAVSELMIGCAHRAAPPPAHSSTSNTPAAAPAPRVCVDPPAAPATL
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEE
NLRDKLAQLLMVGVKNADDARNVVNGYHVGGIFIGSWTDLTIFRGPLGDIAAKAGPLPLA
CHHHHHHHHHHHHCCCCHHHHHHHCCEEECEEEEECCCEEEEEECCCHHHHHCCCCCEEE
VSVDEEGGRVSRLKSLIGTSPSPRELAQTQTVQQVHDLAADRGKKMRDLGITVDFAPVVD
EEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEECCEEC
VSDEPDDAVIGNRSFGADPAKVTEYAGAYAQGLRDAGLLPVLKHFPGHGHGSGDSHTGGV
CCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCE
VTPPLDDLQNDDLVPYRTLVTTPPVGVMVGHLQVPGLTGDVPASLSPEAVQLLRNGVGYK
ECCCHHHCCCCCCCCEEHEECCCCHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCC
GPPFTGPVFSDDLSSMAAISDRYGVSEAVLRSLLAGVDVALWVTTDEVPAVLDRLQKAVA
CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH
SGELPAQRVDESLVRVATMKGRGPACGH
CCCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ALSRPLAAHAAVLAAVSELMIGCAHRAAPPPAHSSTSNTPAAAPAPRVCVDPPAAPATL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEE
NLRDKLAQLLMVGVKNADDARNVVNGYHVGGIFIGSWTDLTIFRGPLGDIAAKAGPLPLA
CHHHHHHHHHHHHCCCCHHHHHHHCCEEECEEEEECCCEEEEEECCCHHHHHCCCCCEEE
VSVDEEGGRVSRLKSLIGTSPSPRELAQTQTVQQVHDLAADRGKKMRDLGITVDFAPVVD
EEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCEEEECCEEC
VSDEPDDAVIGNRSFGADPAKVTEYAGAYAQGLRDAGLLPVLKHFPGHGHGSGDSHTGGV
CCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCE
VTPPLDDLQNDDLVPYRTLVTTPPVGVMVGHLQVPGLTGDVPASLSPEAVQLLRNGVGYK
ECCCHHHCCCCCCCCEEHEECCCCHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCC
GPPFTGPVFSDDLSSMAAISDRYGVSEAVLRSLLAGVDVALWVTTDEVPAVLDRLQKAVA
CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH
SGELPAQRVDESLVRVATMKGRGPACGH
CCCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]