| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409761
Identifier: 41409761
GI number: 41409761
Start: 4068923
End: 4069690
Strand: Reverse
Name: 41409761
Synonym: MAP3663c
Alternate gene names: NA
Gene position: 4069690-4068923 (Counterclockwise)
Preceding gene: 41409763
Following gene: 41409760
Centisome position: 84.26
GC content: 73.57
Gene sequence:
>768_bases GTGGCCGTGACCGACATCTTCGCCCGCCGGGCGACGCTGGCCCGCTCGGTCCGGCTGCTGTCGCAGTTCCGCTACGAACG GTCGGAGCCGGCCCGCTTCTACGGCGCGCTGGCGGCCGACACCGCGGCGATGGTGGACGACCTGTGGCGGGCCGGGCACG GCGAATCCGCGGCCGGCCGCACCCTGCTGGACGTCGGCGGCGGGCCGGGGTACTTCGCGGCGGCCTTCACCGACGCCGGC GTCCGCTACCTCGGCGTCGAGCCCGATCCCGGCGAGATGCACGCGGCCGGCCCCGTCGTCGCCGCCGACACGGGCACGTT CGTGCGCGCCTCGGGCATGGCGCTGCCGTTCGCCGACGACTCGGTGGACATCTGCCTGTCCTCCAACGTCGCCGAACACG TGCCGCGGCCCTGGCAACTCGGCGCCGAGATGCTGCGGGTGACCAGGCCCGGCGGGCTGGCGGTGCTCTCCTACACCGTG TGGCTGGGCCCGTTCGGCGGCCACGAGATGGGCCTGACCCACTACCTCGGCGGGGCCCGCGCCGCCGAGCGCTACGCCCG CAAGCACGGCCATCCGGCCAAAAACAACTACGGGTCGTCGTTGTTCGAGGTGTCGGTGGCCGACGGCCTGGCGTGGGCGG CGAGCACCGGCGCCGCCCTGGCCGCATTTCCCCGCTACCACCCACGATGGGCGTGGTCGCTGACCTCCGTCCCGGTGCTG CGCGAGTTCCTGGTCAGCAATCTGGTGCTGGTCCTGCAACCCCAATAG
Upstream 100 bases:
>100_bases CGGAGCGCAAGGAAGACATCAGTGGTTCAGCCTAGCCGGACGGGCGCCGCGGGCCGCGCCATGCGCGTCGCGCCCGCATA AGCCTGCATAAGGTTGCCCC
Downstream 100 bases:
>100_bases TGAAACGTGTTCTCGTTTTGCCTCGGCTTGGGTAGGGTGGCGCCCATGAGCGACATCCAGACTCAGGCCAAGACCGAATA CGACAAGCTTTTCATCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MAVTDIFARRATLARSVRLLSQFRYERSEPARFYGALAADTAAMVDDLWRAGHGESAAGRTLLDVGGGPGYFAAAFTDAG VRYLGVEPDPGEMHAAGPVVAADTGTFVRASGMALPFADDSVDICLSSNVAEHVPRPWQLGAEMLRVTRPGGLAVLSYTV WLGPFGGHEMGLTHYLGGARAAERYARKHGHPAKNNYGSSLFEVSVADGLAWAASTGAALAAFPRYHPRWAWSLTSVPVL REFLVSNLVLVLQPQ
Sequences:
>Translated_255_residues MAVTDIFARRATLARSVRLLSQFRYERSEPARFYGALAADTAAMVDDLWRAGHGESAAGRTLLDVGGGPGYFAAAFTDAG VRYLGVEPDPGEMHAAGPVVAADTGTFVRASGMALPFADDSVDICLSSNVAEHVPRPWQLGAEMLRVTRPGGLAVLSYTV WLGPFGGHEMGLTHYLGGARAAERYARKHGHPAKNNYGSSLFEVSVADGLAWAASTGAALAAFPRYHPRWAWSLTSVPVL REFLVSNLVLVLQPQ >Mature_254_residues AVTDIFARRATLARSVRLLSQFRYERSEPARFYGALAADTAAMVDDLWRAGHGESAAGRTLLDVGGGPGYFAAAFTDAGV RYLGVEPDPGEMHAAGPVVAADTGTFVRASGMALPFADDSVDICLSSNVAEHVPRPWQLGAEMLRVTRPGGLAVLSYTVW LGPFGGHEMGLTHYLGGARAAERYARKHGHPAKNNYGSSLFEVSVADGLAWAASTGAALAAFPRYHPRWAWSLTSVPVLR EFLVSNLVLVLQPQ
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3663_MYCPA (Q73TQ5)
Other databases:
- EMBL: AE016958 - RefSeq: NP_962597.1 - ProteinModelPortal: Q73TQ5 - SMR: Q73TQ5 - EnsemblBacteria: EBMYCT00000037115 - GeneID: 2719117 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP3663c - NMPDR: fig|262316.1.peg.3663 - GeneTree: EBGT00050000014604 - HOGENOM: HBG429288 - OMA: GHETGLW - ProtClustDB: CLSK871773 - InterPro: IPR013216
Pfam domain/function: PF08241 Methyltransf_11
EC number: NA
Molecular weight: Translated: 27228; Mature: 27097
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTDIFARRATLARSVRLLSQFRYERSEPARFYGALAADTAAMVDDLWRAGHGESAAGR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TLLDVGGGPGYFAAAFTDAGVRYLGVEPDPGEMHAAGPVVAADTGTFVRASGMALPFADD EEEECCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCEEEECCCCEEEECCCEECCCCC SVDICLSSNVAEHVPRPWQLGAEMLRVTRPGGLAVLSYTVWLGPFGGHEMGLTHYLGGAR CEEEEECCCHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCHHHHHCCHH AAERYARKHGHPAKNNYGSSLFEVSVADGLAWAASTGAALAAFPRYHPRWAWSLTSVPVL HHHHHHHHCCCCCCCCCCCCEEEEEHHCCCHHHHCCCCHHHHCCCCCCCEEEEHHHHHHH REFLVSNLVLVLQPQ HHHHHHCEEEEEECC >Mature Secondary Structure AVTDIFARRATLARSVRLLSQFRYERSEPARFYGALAADTAAMVDDLWRAGHGESAAGR CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TLLDVGGGPGYFAAAFTDAGVRYLGVEPDPGEMHAAGPVVAADTGTFVRASGMALPFADD EEEECCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCEEEECCCCEEEECCCEECCCCC SVDICLSSNVAEHVPRPWQLGAEMLRVTRPGGLAVLSYTVWLGPFGGHEMGLTHYLGGAR CEEEEECCCHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCHHHHHCCHH AAERYARKHGHPAKNNYGSSLFEVSVADGLAWAASTGAALAAFPRYHPRWAWSLTSVPVL HHHHHHHHCCCCCCCCCCCCEEEEEHHCCCHHHHCCCCHHHHCCCCCCCEEEEHHHHHHH REFLVSNLVLVLQPQ HHHHHHCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA