| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409763
Identifier: 41409763
GI number: 41409763
Start: 4070922
End: 4072619
Strand: Reverse
Name: 41409763
Synonym: MAP3665c
Alternate gene names: NA
Gene position: 4072619-4070922 (Counterclockwise)
Preceding gene: 41409764
Following gene: 41409761
Centisome position: 84.32
GC content: 76.86
Gene sequence:
>1698_bases GTGCGCTGGACCCGGCCCGGGTACGCATTGGTCCTGGCGCTGCTGGTGGTCGGGCCGCTGCTGAGGCCCGGGTATCTGCT GCTGCGGGACGCGGTGTCGACGCCGCGGTCCTATCTGTCCGACACCGCGCTGGGGTTGACGGCCGCGCCGCGCGCCGCCC CGCAGGATTTCGCGGTGGCGCTGGCTTCGCACCTGGTCGACGGCGGGGTCGTGGTGAAGACGCTGCTACTGCTGGGGCTG TGGCTGGCCGGCTGGGGCGCGGCCCGGCTGGTCGCGCTCGTGCTGCCGGACGCGGGAATGCCCGGCGAATTCGTGGCCAC CACGCTGGCGATCTGGAATCCCTATGTGGCAGAACGGCTTTTGCAAGGCCATTGGAGCCTGCTGGTGGGCTACGGCTGCC TGCCGTGGGTGGCGACGGCCATGCTGGGGTTGCGGACGGGCGGGGCCGGGTTTTTCGGGCTGGCGTTCTTCATCGCGCTG GCCGGGCTGACCCCGACCGGTCTGCTGCTGGCGGCGGCGGTGGCGCTGGCCTGCGTGCCGGTGGCCGGTGCGGGCCGGCG GCGTTGGGTGTGCGCCGCGGCGGCGATCGGCGCCGCGGCGGCGGCGGCGCTGCCCTGGCTGGTCGCCGCGGTCACGGGTG CGGCGTTGCCGTCGCACACGCCGGCCAACCGGCTCGGCGTGGAAGCGTTCGCGCCACGCGCCGAGCCGGGCCTGGGCACG CTGACCAGCCTGGCCAGCCTGGGCGGCATCTGGAACGCTGACGCCGTACCCGGTTCGCGCACAACGCTTTTCGCGGTGGC CTCGGCCGTGGTGCTGCTGGGCGTGGTGGCCGTCGGACTGCCGGCGGTGGCCCGCCGTCCGGCGGCGGTGCCGCTGCTGG TGCTGGCGGCGGCCGCGGTGCTGATCCCCGCGGGGCTGGCCACCGCCCCGGGGCTGCGGCTGCTGGGCGCGGTGGTCGAC GCCGCGCCGGGCGTCGGGGTGCTGCGCGACGGGCAGAAGTGGGTGGCGCTGGCGGTGCCCGGCTACGCGCTGGCCGGTGC CGGCGCGGTGCTGACGCTACGGCGCCGGCTTTTCGGGGCCGCCGCCCCGGCGCTGGTGTGCTGCCTGGCGCTGATCCTGG CGCTGCCCGACCTGGTCTGGGGCGTGGGCGGCAAGGTGTCGCCGGTGCGCTACCCGCGCGGCTGGCCGGCCGTCGCGGCG GCGATCAATGCCCGGCCCGACGCGGTCGCGGTGCTGCCGGCCGGCACCATGCGGCTGTTCTCCTGGTCGGGCCCGGCGCC GGTGCTCGACCCGCTGCCCCGCTGGGTGCGCGCCGACGTGCTGAGCACGGGCGACCTGGTGATCTCGGGAACCACCATCG CCGGTGAAGGCGCGCACGCCCGGGCCGTGCAGGAGCTACTGCTGTCCGGGCCCGATCCGGCGGCGCTGGCCGCCGCCGGG GTGGGCTGGCTGGTGCTGGAGGCCGACAGCGCCGGCGAGGTGGGCGCCGCCGCGCACACCCTGGGCGCGGCGGCGCCGGT GTACCGGGACGACGAGATCGCGCTCTATCGGATCGGCGGGCACACCGCCGGTGTGGCCGCCGATCGCCGGGCGGCGACGC TGATCGCGCATCTGGCCTGGCTGGTGCTGCTGCTCGGCAGCGGGGCCGGTGTCCTGGTCGGTGCGTGGCGGCGCCGCGGG GTCAGCCGCGCCCGCTGA
Upstream 100 bases:
>100_bases CCACCCAACGTCCCGATCTGCGCTCCGAGTCCGGTCCCGACGAGCCCACCGAGGCGGGGCCGACCGAGGCCAAGCCGCCC GACCGGGAATAGCCCGCCGC
Downstream 100 bases:
>100_bases CCAGGCCGCTGACCGTGCGGCCGGCGTGTACCGCTTCCAGCACGCCGCGCATCGCGTCGGCGCTTTGCGCCCAAGAGAAT TCGCCGCTGCGGGTGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MRWTRPGYALVLALLVVGPLLRPGYLLLRDAVSTPRSYLSDTALGLTAAPRAAPQDFAVALASHLVDGGVVVKTLLLLGL WLAGWGAARLVALVLPDAGMPGEFVATTLAIWNPYVAERLLQGHWSLLVGYGCLPWVATAMLGLRTGGAGFFGLAFFIAL AGLTPTGLLLAAAVALACVPVAGAGRRRWVCAAAAIGAAAAAALPWLVAAVTGAALPSHTPANRLGVEAFAPRAEPGLGT LTSLASLGGIWNADAVPGSRTTLFAVASAVVLLGVVAVGLPAVARRPAAVPLLVLAAAAVLIPAGLATAPGLRLLGAVVD AAPGVGVLRDGQKWVALAVPGYALAGAGAVLTLRRRLFGAAAPALVCCLALILALPDLVWGVGGKVSPVRYPRGWPAVAA AINARPDAVAVLPAGTMRLFSWSGPAPVLDPLPRWVRADVLSTGDLVISGTTIAGEGAHARAVQELLLSGPDPAALAAAG VGWLVLEADSAGEVGAAAHTLGAAAPVYRDDEIALYRIGGHTAGVAADRRAATLIAHLAWLVLLLGSGAGVLVGAWRRRG VSRAR
Sequences:
>Translated_565_residues MRWTRPGYALVLALLVVGPLLRPGYLLLRDAVSTPRSYLSDTALGLTAAPRAAPQDFAVALASHLVDGGVVVKTLLLLGL WLAGWGAARLVALVLPDAGMPGEFVATTLAIWNPYVAERLLQGHWSLLVGYGCLPWVATAMLGLRTGGAGFFGLAFFIAL AGLTPTGLLLAAAVALACVPVAGAGRRRWVCAAAAIGAAAAAALPWLVAAVTGAALPSHTPANRLGVEAFAPRAEPGLGT LTSLASLGGIWNADAVPGSRTTLFAVASAVVLLGVVAVGLPAVARRPAAVPLLVLAAAAVLIPAGLATAPGLRLLGAVVD AAPGVGVLRDGQKWVALAVPGYALAGAGAVLTLRRRLFGAAAPALVCCLALILALPDLVWGVGGKVSPVRYPRGWPAVAA AINARPDAVAVLPAGTMRLFSWSGPAPVLDPLPRWVRADVLSTGDLVISGTTIAGEGAHARAVQELLLSGPDPAALAAAG VGWLVLEADSAGEVGAAAHTLGAAAPVYRDDEIALYRIGGHTAGVAADRRAATLIAHLAWLVLLLGSGAGVLVGAWRRRG VSRAR >Mature_565_residues MRWTRPGYALVLALLVVGPLLRPGYLLLRDAVSTPRSYLSDTALGLTAAPRAAPQDFAVALASHLVDGGVVVKTLLLLGL WLAGWGAARLVALVLPDAGMPGEFVATTLAIWNPYVAERLLQGHWSLLVGYGCLPWVATAMLGLRTGGAGFFGLAFFIAL AGLTPTGLLLAAAVALACVPVAGAGRRRWVCAAAAIGAAAAAALPWLVAAVTGAALPSHTPANRLGVEAFAPRAEPGLGT LTSLASLGGIWNADAVPGSRTTLFAVASAVVLLGVVAVGLPAVARRPAAVPLLVLAAAAVLIPAGLATAPGLRLLGAVVD AAPGVGVLRDGQKWVALAVPGYALAGAGAVLTLRRRLFGAAAPALVCCLALILALPDLVWGVGGKVSPVRYPRGWPAVAA AINARPDAVAVLPAGTMRLFSWSGPAPVLDPLPRWVRADVLSTGDLVISGTTIAGEGAHARAVQELLLSGPDPAALAAAG VGWLVLEADSAGEVGAAAHTLGAAAPVYRDDEIALYRIGGHTAGVAADRRAATLIAHLAWLVLLLGSGAGVLVGAWRRRG VSRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56943; Mature: 56943
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWTRPGYALVLALLVVGPLLRPGYLLLRDAVSTPRSYLSDTALGLTAAPRAAPQDFAVA CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHH LASHLVDGGVVVKTLLLLGLWLAGWGAARLVALVLPDAGMPGEFVATTLAIWNPYVAERL HHHHHHCCHHHHHHHHHHHHHHHCCHHHHEEHHEECCCCCCHHHHHHHHHHHCHHHHHHH LQGHWSLLVGYGCLPWVATAMLGLRTGGAGFFGLAFFIALAGLTPTGLLLAAAVALACVP HHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC VAGAGRRRWVCAAAAIGAAAAAALPWLVAAVTGAALPSHTPANRLGVEAFAPRAEPGLGT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHCCCCCCCCCHH LTSLASLGGIWNADAVPGSRTTLFAVASAVVLLGVVAVGLPAVARRPAAVPLLVLAAAAV HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHH LIPAGLATAPGLRLLGAVVDAAPGVGVLRDGQKWVALAVPGYALAGAGAVLTLRRRLFGA HHHCCCCCCCHHHHHHHHHHCCCCCCEEECCCEEEEEEECCHHHHCCHHHHHHHHHHHHC AAPALVCCLALILALPDLVWGVGGKVSPVRYPRGWPAVAAAINARPDAVAVLPAGTMRLF CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCEEEE SWSGPAPVLDPLPRWVRADVLSTGDLVISGTTIAGEGAHARAVQELLLSGPDPAALAAAG ECCCCCCCHHHHHHHHHHHHCCCCCEEEECCEECCCCHHHHHHHHHHHCCCCHHHHHHCC VGWLVLEADSAGEVGAAAHTLGAAAPVYRDDEIALYRIGGHTAGVAADRRAATLIAHLAW CCEEEEECCCCCCCHHHHHHHHCCCCCEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHH LVLLLGSGAGVLVGAWRRRGVSRAR HHHHHCCCCCEEHHHHHHCCCCCCC >Mature Secondary Structure MRWTRPGYALVLALLVVGPLLRPGYLLLRDAVSTPRSYLSDTALGLTAAPRAAPQDFAVA CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHH LASHLVDGGVVVKTLLLLGLWLAGWGAARLVALVLPDAGMPGEFVATTLAIWNPYVAERL HHHHHHCCHHHHHHHHHHHHHHHCCHHHHEEHHEECCCCCCHHHHHHHHHHHCHHHHHHH LQGHWSLLVGYGCLPWVATAMLGLRTGGAGFFGLAFFIALAGLTPTGLLLAAAVALACVP HHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC VAGAGRRRWVCAAAAIGAAAAAALPWLVAAVTGAALPSHTPANRLGVEAFAPRAEPGLGT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHCCCCCCCCCHH LTSLASLGGIWNADAVPGSRTTLFAVASAVVLLGVVAVGLPAVARRPAAVPLLVLAAAAV HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHH LIPAGLATAPGLRLLGAVVDAAPGVGVLRDGQKWVALAVPGYALAGAGAVLTLRRRLFGA HHHCCCCCCCHHHHHHHHHHCCCCCCEEECCCEEEEEEECCHHHHCCHHHHHHHHHHHHC AAPALVCCLALILALPDLVWGVGGKVSPVRYPRGWPAVAAAINARPDAVAVLPAGTMRLF CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCEEEE SWSGPAPVLDPLPRWVRADVLSTGDLVISGTTIAGEGAHARAVQELLLSGPDPAALAAAG ECCCCCCCHHHHHHHHHHHHCCCCCEEEECCEECCCCHHHHHHHHHHHCCCCHHHHHHCC VGWLVLEADSAGEVGAAAHTLGAAAPVYRDDEIALYRIGGHTAGVAADRRAATLIAHLAW CCEEEEECCCCCCCHHHHHHHHCCCCCEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHH LVLLLGSGAGVLVGAWRRRGVSRAR HHHHHCCCCCEEHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA