| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409750
Identifier: 41409750
GI number: 41409750
Start: 4056052
End: 4057074
Strand: Direct
Name: 41409750
Synonym: MAP3652
Alternate gene names: NA
Gene position: 4056052-4057074 (Clockwise)
Preceding gene: 41409748
Following gene: 41409751
Centisome position: 83.98
GC content: 70.38
Gene sequence:
>1023_bases GTGACCAGTGACGGGTATGCGCGAATTCGCGAGGGTGGACCGTACTTCGACGACCTCTCGGTGGGGCAGGTGTTCGACTG GGCGCCGTCGGTGACGCTGTCGTCCGGGTTGGCCGCCGCCCATCAGGCGATCCTGGGCGACCGGCTGCGCCTGGCGCTGG ACGCCGATCTGTGCGCGGCGGTGACCGGCCTGCCCGCGCCGCTGGCCCACCCGGGGCTGGTGTGCGACGTGGCGATCGGG CAGTCGACGCTGGTGACCCAGCGGGTCAAGGCCAATCTGTTCTATCGCGGCCTGGTGTTCCACCGCTTCCCGGTCATCGG CGATTCCCTCTACACGCGCACCGAAGTGGTTGGGCTGCGCGCTAATTCACCCAAGCCGGGCCGGGCCCCCACCGGGATGG CGGCGCTGCGGATGATCACCATCGACCAGGCCGACCAGTTGGTGCTCGACTTCTACCGGTGCGGAATGCTGCCCGCCAGC CCGGAATTCACGGCCGAGGCTGGTTCGGTGCCGCACGACGACCTGTCCGGCATCGGCGCCGACGTGCCCGGCCCGGCGCA CGATCCCACCGCGCAATGGGACGGCGCGGTCTTCCGCACCGAGGTGCCCGGCCCGCACTTCGACCGCGCCCTGGCGGGTT CGGTGCTGCACAGCACCGGCGACGTCGTCAGCAGCGCACCCGAACTGGCCCGGCTGACGCTGAACATCGCTGCTACACAT CATGATTCACGCGTCGGCGGCCGGCGCCTGGTGTACGGCGGGCACACCATCGGATTGGCGCTGGCGCAGGCTGCCCGGCT GCTGCCCAACCTGGTGACGGTGCTGGGCTGGCGGTCCTGCGATCACACCGGGCCGGTGCACGAGGGCGACACCCTCTACA GCGAACTGCACATCGAATCCGCCCGGCCCACCGAACATGGGGGCGTGCTCGGGCTGCGATCGCTGGTGTACGCGGTCAGC GACACACCGGACGAGCCGGACCGCGCCGTGCTGGACTGGCGGTTCGACGCGCTGCAGTTCTGA
Upstream 100 bases:
>100_bases GACTTGCTGGGCGAAAACCCGCGAATTGGCGCCCACAAGTCGACGTTGGGGTCCGATCCGGATTGACCCTCGATTCCACA GCCTACCAGCATGTGGCGTT
Downstream 100 bases:
>100_bases GCCGCACGCCCGCGAGCACCGCCATGAGCACGGCCGCGAGCACGGCCCCGAGCACAATGGGTGACGTGAGCGCGGCCGCG ACCGACTGGGGAGGTAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Acyl Dehydratase-Like Protein; MaoC Family Protein; P40 Protein; MaoC Domain Protein
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTSDGYARIREGGPYFDDLSVGQVFDWAPSVTLSSGLAAAHQAILGDRLRLALDADLCAAVTGLPAPLAHPGLVCDVAIG QSTLVTQRVKANLFYRGLVFHRFPVIGDSLYTRTEVVGLRANSPKPGRAPTGMAALRMITIDQADQLVLDFYRCGMLPAS PEFTAEAGSVPHDDLSGIGADVPGPAHDPTAQWDGAVFRTEVPGPHFDRALAGSVLHSTGDVVSSAPELARLTLNIAATH HDSRVGGRRLVYGGHTIGLALAQAARLLPNLVTVLGWRSCDHTGPVHEGDTLYSELHIESARPTEHGGVLGLRSLVYAVS DTPDEPDRAVLDWRFDALQF
Sequences:
>Translated_340_residues MTSDGYARIREGGPYFDDLSVGQVFDWAPSVTLSSGLAAAHQAILGDRLRLALDADLCAAVTGLPAPLAHPGLVCDVAIG QSTLVTQRVKANLFYRGLVFHRFPVIGDSLYTRTEVVGLRANSPKPGRAPTGMAALRMITIDQADQLVLDFYRCGMLPAS PEFTAEAGSVPHDDLSGIGADVPGPAHDPTAQWDGAVFRTEVPGPHFDRALAGSVLHSTGDVVSSAPELARLTLNIAATH HDSRVGGRRLVYGGHTIGLALAQAARLLPNLVTVLGWRSCDHTGPVHEGDTLYSELHIESARPTEHGGVLGLRSLVYAVS DTPDEPDRAVLDWRFDALQF >Mature_339_residues TSDGYARIREGGPYFDDLSVGQVFDWAPSVTLSSGLAAAHQAILGDRLRLALDADLCAAVTGLPAPLAHPGLVCDVAIGQ STLVTQRVKANLFYRGLVFHRFPVIGDSLYTRTEVVGLRANSPKPGRAPTGMAALRMITIDQADQLVLDFYRCGMLPASP EFTAEAGSVPHDDLSGIGADVPGPAHDPTAQWDGAVFRTEVPGPHFDRALAGSVLHSTGDVVSSAPELARLTLNIAATHH DSRVGGRRLVYGGHTIGLALAQAARLLPNLVTVLGWRSCDHTGPVHEGDTLYSELHIESARPTEHGGVLGLRSLVYAVSD TPDEPDRAVLDWRFDALQF
Specific function: Unknown
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36188; Mature: 36057
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDGYARIREGGPYFDDLSVGQVFDWAPSVTLSSGLAAAHQAILGDRLRLALDADLCAA CCCCCCEEECCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHCCEEEEECHHHHHH VTGLPAPLAHPGLVCDVAIGQSTLVTQRVKANLFYRGLVFHRFPVIGDSLYTRTEVVGLR HHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEEE ANSPKPGRAPTGMAALRMITIDQADQLVLDFYRCGMLPASPEFTAEAGSVPHDDLSGIGA CCCCCCCCCCCCHHEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCC DVPGPAHDPTAQWDGAVFRTEVPGPHFDRALAGSVLHSTGDVVSSAPELARLTLNIAATH CCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHCCCHHEEEEEEEEEEC HDSRVGGRRLVYGGHTIGLALAQAARLLPNLVTVLGWRSCDHTGPVHEGDTLYSELHIES CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEECC ARPTEHGGVLGLRSLVYAVSDTPDEPDRAVLDWRFDALQF CCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHCC >Mature Secondary Structure TSDGYARIREGGPYFDDLSVGQVFDWAPSVTLSSGLAAAHQAILGDRLRLALDADLCAA CCCCCEEECCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHCCEEEEECHHHHHH VTGLPAPLAHPGLVCDVAIGQSTLVTQRVKANLFYRGLVFHRFPVIGDSLYTRTEVVGLR HHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEEE ANSPKPGRAPTGMAALRMITIDQADQLVLDFYRCGMLPASPEFTAEAGSVPHDDLSGIGA CCCCCCCCCCCCHHEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCC DVPGPAHDPTAQWDGAVFRTEVPGPHFDRALAGSVLHSTGDVVSSAPELARLTLNIAATH CCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHCCCHHEEEEEEEEEEC HDSRVGGRRLVYGGHTIGLALAQAARLLPNLVTVLGWRSCDHTGPVHEGDTLYSELHIES CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEECC ARPTEHGGVLGLRSLVYAVSDTPDEPDRAVLDWRFDALQF CCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA