| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409743
Identifier: 41409743
GI number: 41409743
Start: 4046903
End: 4048438
Strand: Direct
Name: 41409743
Synonym: MAP3645
Alternate gene names: NA
Gene position: 4046903-4048438 (Clockwise)
Preceding gene: 41409742
Following gene: 41409744
Centisome position: 83.79
GC content: 73.89
Gene sequence:
>1536_bases GTGAGCGGCGACAATCCGGCCGCCGCGGTCGACGCGCTGGTGGCAGCCGTCAGCCCGGGGCTGGATCCGCCGGCGGTGCA CCGCAGCGACGCGGTGCTGGTGACCGGGCCGTGGATGGCCGGGGTCACCGCGGTGGCCGCCGCGCTGCAGGAGCGGCTGC CGCAGCACAAGTTCGTCGAGTCGACGGATCTCGGACCCGGCGAGGTGCCGACCGCGGTGGTGTTCGTGGTGTCGGCGGCC GCGCACCTGACACCCTCGGACTGCGCGCTGCTGGACGCCGCGACCGAACACACCGACGCGGTGGTGGGGGTGGTATCCAA GATCGACGTGCACCGCGGCTGGCGTGAGGTGCTCGCCGCCAATCGCGACACCCTGGCCGCGCACGCGCCGCGCTACGCCC GGGTGCCCTGGGTGGGTGCGGCGGCGCTGCCCGACGTCGGCGAACCCGACGTCGACGACCTGGCCAAGACCGTCGCGGCG CAACTCGACGACGCCGATCTGGCCCGGCGAAACAGGTTGCGGGCGTGGGAATCCCGCTTGCGGACGGTGGCGCGGCGGTT CGACCGCGAGGTCGAGGCCCCCGGCCGGCGGGCCCGGGTCGAGGCGCTGCGCGAAGAGCGCAGCACCGCGCTGCAGCAGC GGCGCCAGGCCAAAACCGAGCGCAGCATCACGCTGCGCGGTCAGATCCAGCAGGCCCGGGTGGCGCTGTCGCACTCCGCG CGCAACCGGTGCGCGTCGGTGCGCACCGAGCTGCAGGAGCACGCGGCGGGCCTGTCCCGGGGCAAGTTGTCCGGCTTCGA GGCGCACACCCGCGACCGGCTGGCCGAGGTGGTCGCCGAGGTCAACGACGGCACCGACACGCAACTGGCGGACACCGCGC AGGCGGTGGGGGTGGCGGTGGACCTGCCGGCCCTCGAGCAGCTGCCGGCGGTGGAGGTCTCGCCGCCGCCGCTGAAATCA CGCCGACAGGAAACCTGGCTGATGATCCTGTTCGGCGTCGGGTTCGGGCTCGGGGTGGCGCTGACGCTGAGCCGGCTGAT GAGCGGGCTGGCGTCCCGGCTCAGCCCGGCACTGGCGGTGGCGGCCGCCGTGGTGTGCGTGCTGATCTCGGTGGCGCTCA CCTTCCTGGTGATCAACATCCGCGGCCTGCTGCGGGACCGGGCGCTGCTGGACCGCTGGGCGGGTGACGCGACGGCGTCG CTGCGCTCGGTGGTCGAGGAGCTGGTGGCCACCCGGGTGCTGGTGGCCGAGTCGGTGCTGAGCAAGGCGCTGCTGGCCCA GGACGAGGCCGAGAACGCGGCGGTGTCGGCGTCGGTCAGCGCCATCGACACCGAGCTGCGCGAGCACGCCCTGGCCGCCG CCCGGGCAGCGGCCGCGCGGGATCGGGAGATGCCGGCGGTCACGGCCGCGCTCGAAGCCGTGCGTGCAGAACTCGGCGAA CCGGGTATACAACCGGGCGGAAGTCCCGCCGAAGATGCCGGCGGTGCGAAAACCGAAAAACCCGCTTCGAGGAGCGAAGA TGGCGACCGGCCGTGA
Upstream 100 bases:
>100_bases GCGCGTGCGGCGCCGACATCGCCCGGGGATCGCTGCGGCTGTGGTCGCAGGCCTGCGCCACGCTGCCCGGCGAACGGCCC GTCGAACGGGAGGACCCGGC
Downstream 100 bases:
>100_bases GCTTCTGAATCGTTGTTGTGAGAAGGCTTATACCTGCCCGAGACTTCCCCGACAAGTTCCTCACGATAACCTGTAGTTAA CGCCACCAAGTCCTTAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MSGDNPAAAVDALVAAVSPGLDPPAVHRSDAVLVTGPWMAGVTAVAAALQERLPQHKFVESTDLGPGEVPTAVVFVVSAA AHLTPSDCALLDAATEHTDAVVGVVSKIDVHRGWREVLAANRDTLAAHAPRYARVPWVGAAALPDVGEPDVDDLAKTVAA QLDDADLARRNRLRAWESRLRTVARRFDREVEAPGRRARVEALREERSTALQQRRQAKTERSITLRGQIQQARVALSHSA RNRCASVRTELQEHAAGLSRGKLSGFEAHTRDRLAEVVAEVNDGTDTQLADTAQAVGVAVDLPALEQLPAVEVSPPPLKS RRQETWLMILFGVGFGLGVALTLSRLMSGLASRLSPALAVAAAVVCVLISVALTFLVINIRGLLRDRALLDRWAGDATAS LRSVVEELVATRVLVAESVLSKALLAQDEAENAAVSASVSAIDTELREHALAAARAAAARDREMPAVTAALEAVRAELGE PGIQPGGSPAEDAGGAKTEKPASRSEDGDRP
Sequences:
>Translated_511_residues MSGDNPAAAVDALVAAVSPGLDPPAVHRSDAVLVTGPWMAGVTAVAAALQERLPQHKFVESTDLGPGEVPTAVVFVVSAA AHLTPSDCALLDAATEHTDAVVGVVSKIDVHRGWREVLAANRDTLAAHAPRYARVPWVGAAALPDVGEPDVDDLAKTVAA QLDDADLARRNRLRAWESRLRTVARRFDREVEAPGRRARVEALREERSTALQQRRQAKTERSITLRGQIQQARVALSHSA RNRCASVRTELQEHAAGLSRGKLSGFEAHTRDRLAEVVAEVNDGTDTQLADTAQAVGVAVDLPALEQLPAVEVSPPPLKS RRQETWLMILFGVGFGLGVALTLSRLMSGLASRLSPALAVAAAVVCVLISVALTFLVINIRGLLRDRALLDRWAGDATAS LRSVVEELVATRVLVAESVLSKALLAQDEAENAAVSASVSAIDTELREHALAAARAAAARDREMPAVTAALEAVRAELGE PGIQPGGSPAEDAGGAKTEKPASRSEDGDRP >Mature_510_residues SGDNPAAAVDALVAAVSPGLDPPAVHRSDAVLVTGPWMAGVTAVAAALQERLPQHKFVESTDLGPGEVPTAVVFVVSAAA HLTPSDCALLDAATEHTDAVVGVVSKIDVHRGWREVLAANRDTLAAHAPRYARVPWVGAAALPDVGEPDVDDLAKTVAAQ LDDADLARRNRLRAWESRLRTVARRFDREVEAPGRRARVEALREERSTALQQRRQAKTERSITLRGQIQQARVALSHSAR NRCASVRTELQEHAAGLSRGKLSGFEAHTRDRLAEVVAEVNDGTDTQLADTAQAVGVAVDLPALEQLPAVEVSPPPLKSR RQETWLMILFGVGFGLGVALTLSRLMSGLASRLSPALAVAAAVVCVLISVALTFLVINIRGLLRDRALLDRWAGDATASL RSVVEELVATRVLVAESVLSKALLAQDEAENAAVSASVSAIDTELREHALAAARAAAARDREMPAVTAALEAVRAELGEP GIQPGGSPAEDAGGAKTEKPASRSEDGDRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53892; Mature: 53760
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGDNPAAAVDALVAAVSPGLDPPAVHRSDAVLVTGPWMAGVTAVAAALQERLPQHKFVE CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHCCC STDLGPGEVPTAVVFVVSAAAHLTPSDCALLDAATEHTDAVVGVVSKIDVHRGWREVLAA CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NRDTLAAHAPRYARVPWVGAAALPDVGEPDVDDLAKTVAAQLDDADLARRNRLRAWESRL CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RTVARRFDREVEAPGRRARVEALREERSTALQQRRQAKTERSITLRGQIQQARVALSHSA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHH RNRCASVRTELQEHAAGLSRGKLSGFEAHTRDRLAEVVAEVNDGTDTQLADTAQAVGVAV HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEE DLPALEQLPAVEVSPPPLKSRRQETWLMILFGVGFGLGVALTLSRLMSGLASRLSPALAV CCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAVVCVLISVALTFLVINIRGLLRDRALLDRWAGDATASLRSVVEELVATRVLVAESVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH SKALLAQDEAENAAVSASVSAIDTELREHALAAARAAAARDREMPAVTAALEAVRAELGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC PGIQPGGSPAEDAGGAKTEKPASRSEDGDRP CCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SGDNPAAAVDALVAAVSPGLDPPAVHRSDAVLVTGPWMAGVTAVAAALQERLPQHKFVE CCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHCCC STDLGPGEVPTAVVFVVSAAAHLTPSDCALLDAATEHTDAVVGVVSKIDVHRGWREVLAA CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NRDTLAAHAPRYARVPWVGAAALPDVGEPDVDDLAKTVAAQLDDADLARRNRLRAWESRL CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RTVARRFDREVEAPGRRARVEALREERSTALQQRRQAKTERSITLRGQIQQARVALSHSA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHH RNRCASVRTELQEHAAGLSRGKLSGFEAHTRDRLAEVVAEVNDGTDTQLADTAQAVGVAV HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEE DLPALEQLPAVEVSPPPLKSRRQETWLMILFGVGFGLGVALTLSRLMSGLASRLSPALAV CCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAVVCVLISVALTFLVINIRGLLRDRALLDRWAGDATASLRSVVEELVATRVLVAESVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH SKALLAQDEAENAAVSASVSAIDTELREHALAAARAAAARDREMPAVTAALEAVRAELGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC PGIQPGGSPAEDAGGAKTEKPASRSEDGDRP CCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA