| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409726
Identifier: 41409726
GI number: 41409726
Start: 4025141
End: 4025857
Strand: Reverse
Name: 41409726
Synonym: MAP3628c
Alternate gene names: NA
Gene position: 4025857-4025141 (Counterclockwise)
Preceding gene: 41409727
Following gene: 41409724
Centisome position: 83.35
GC content: 74.76
Gene sequence:
>717_bases GTGCTGGCGTTCGGCGAAAACCGTGGGCTCGTCGCGCACCTACGGCTGGCCGGCGCCTTCGTGTTCGTGATGGTCGGCAC CGTGGCGCAGGCCCGCGCCGCAATCGCCTGGGGCGCCGACGGTTTGATCGCCCAGGGCCGCGAGGCCGGCGGCCATCTGG TGGGGACCACGGCGGCCCTGGACTTCCTGCCGCACGCGCTCGCCGCGGCCGGCGGCCGCCCGGTGTTCCTGGCCGGGGGC ATCGCCACCGCCGCCGACAGCCGCGCCGCCCTGGACGCCGGCGCCGACGGCGTCATCGCCGGCACCCGATTCCTGCTGAC GCACGAGTCCGATGCGAGCCGCGGCTATCAGCAGCGAGTCCTGCAGGCGGACAACACGATCGAAACCAACCTGTTCGGGC TGAGCTGGCCGCTGCGCCATCGGGTGGTGCCCAACGCCGCCACCCGCCGGTGGTGCGGCGCCGACGGCAAGGCCAGGGCG CTGCCCGCCGCACTCAATGCGGCGAGCCGCCCGCTGTCGGCGCTGGGCTATTTCGACGCGGGCGCATTGCTGCGCCTGCA ATCGCCGCGCCGTCCGCTGTTCACCCCGCTGGCACCGGTGGCCGGCGTTCCGGACTCGCTGCTGGACAGCGCCGCGCTCT ACGCCGGCGAAACCGCCTCGCGCATCGGCGAACTCACCTCCGCGCGCCAGGCCGTCGCCGACCTCACCCCGCGCTGA
Upstream 100 bases:
>100_bases TGAGCAGGCGCCCGGGCGCGCGGTCGCGGTAAACCTGTTGCTGCCCTTTACCCGTCGCCGCCACGTCGCGGTCTGCGTCG AGGCCCGGGTGGACGTCGTC
Downstream 100 bases:
>100_bases GGCCTAGCGCACCACCGCAAACGCGAAGCCGTCCCAGTGCTTGGCGCCGACCGTCTGGATCACCGCGGTGTCCAGCCGCG GGTGCTCGCCCATCGCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Oxidoreductase; Oxidoreductase 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase-Related Protein; Oxidoreductase; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MLAFGENRGLVAHLRLAGAFVFVMVGTVAQARAAIAWGADGLIAQGREAGGHLVGTTAALDFLPHALAAAGGRPVFLAGG IATAADSRAALDAGADGVIAGTRFLLTHESDASRGYQQRVLQADNTIETNLFGLSWPLRHRVVPNAATRRWCGADGKARA LPAALNAASRPLSALGYFDAGALLRLQSPRRPLFTPLAPVAGVPDSLLDSAALYAGETASRIGELTSARQAVADLTPR
Sequences:
>Translated_238_residues MLAFGENRGLVAHLRLAGAFVFVMVGTVAQARAAIAWGADGLIAQGREAGGHLVGTTAALDFLPHALAAAGGRPVFLAGG IATAADSRAALDAGADGVIAGTRFLLTHESDASRGYQQRVLQADNTIETNLFGLSWPLRHRVVPNAATRRWCGADGKARA LPAALNAASRPLSALGYFDAGALLRLQSPRRPLFTPLAPVAGVPDSLLDSAALYAGETASRIGELTSARQAVADLTPR >Mature_238_residues MLAFGENRGLVAHLRLAGAFVFVMVGTVAQARAAIAWGADGLIAQGREAGGHLVGTTAALDFLPHALAAAGGRPVFLAGG IATAADSRAALDAGADGVIAGTRFLLTHESDASRGYQQRVLQADNTIETNLFGLSWPLRHRVVPNAATRRWCGADGKARA LPAALNAASRPLSALGYFDAGALLRLQSPRRPLFTPLAPVAGVPDSLLDSAALYAGETASRIGELTSARQAVADLTPR
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24523; Mature: 24523
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAFGENRGLVAHLRLAGAFVFVMVGTVAQARAAIAWGADGLIAQGREAGGHLVGTTAAL CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEHHHHH DFLPHALAAAGGRPVFLAGGIATAADSRAALDAGADGVIAGTRFLLTHESDASRGYQQRV HHHHHHHHHCCCCEEEEECCHHHCCCCCHHHCCCCCCEEECEEEEEEECCCHHHHHHHHH LQADNTIETNLFGLSWPLRHRVVPNAATRRWCGADGKARALPAALNAASRPLSALGYFDA HHCCCCEEEEEEECCCCHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHCCCCC GALLRLQSPRRPLFTPLAPVAGVPDSLLDSAALYAGETASRIGELTSARQAVADLTPR CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLAFGENRGLVAHLRLAGAFVFVMVGTVAQARAAIAWGADGLIAQGREAGGHLVGTTAAL CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEHHHHH DFLPHALAAAGGRPVFLAGGIATAADSRAALDAGADGVIAGTRFLLTHESDASRGYQQRV HHHHHHHHHCCCCEEEEECCHHHCCCCCHHHCCCCCCEEECEEEEEEECCCHHHHHHHHH LQADNTIETNLFGLSWPLRHRVVPNAATRRWCGADGKARALPAALNAASRPLSALGYFDA HHCCCCEEEEEEECCCCHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHCCCCC GALLRLQSPRRPLFTPLAPVAGVPDSLLDSAALYAGETASRIGELTSARQAVADLTPR CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA