| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is mymT [H]
Identifier: 41409724
GI number: 41409724
Start: 4024196
End: 4024351
Strand: Reverse
Name: mymT [H]
Synonym: MAP3626c
Alternate gene names: 41409724
Gene position: 4024351-4024196 (Counterclockwise)
Preceding gene: 41409726
Following gene: 41409719
Centisome position: 83.32
GC content: 66.67
Gene sequence:
>156_bases GTGAGTCACATGGCAACTTACGAGTCCGGAACCCTGCTGACCTGCGGCCACGAGGGCTGCGGCTGTCGCGTCCGCATCGA GGTTCCCTGCCACTGCTCGGGTGCCGGTGAGGAGTACCGCTGCACCTGTGGCGACGCGCTGACCCCGGTCAAGTAG
Upstream 100 bases:
>100_bases GCCGGGCCGGTCGATCCGGCCGTTTACTATATACCCGTGGGGGGTATATAGTGTAGGTGCGGTCGACCCGCGCCGCACGA GTCACAACAGGAAGAAATGG
Downstream 100 bases:
>100_bases TCCGTTGACCCGCTCGTGCGTTCGGGCGCCTCATCGCCCGAACGCACGAGCGGTCAGCTCGACCGTGGCCGTCGAGCGCA GGGTGGTCGCCGAAATCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: MT; Copper-binding metallothionein; Cu(I)-binding metallothionein; Mycobacterial metallothionein [H]
Number of amino acids: Translated: 51; Mature: 50
Protein sequence:
>51_residues MSHMATYESGTLLTCGHEGCGCRVRIEVPCHCSGAGEEYRCTCGDALTPVK
Sequences:
>Translated_51_residues MSHMATYESGTLLTCGHEGCGCRVRIEVPCHCSGAGEEYRCTCGDALTPVK >Mature_50_residues SHMATYESGTLLTCGHEGCGCRVRIEVPCHCSGAGEEYRCTCGDALTPVK
Specific function: Metallothioneins are small proteins that have a high content of cysteine residues wich allow them to bind heavy metal ions through clusters of thiolate bonds. MymT binds up to seven ions of Cu(+), with a preference for four to six Cu(+) ions, in a solvent
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallothionein superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5421; Mature: 5290
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
13.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 17.6 %Cys+Met (Translated Protein) 14.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 16.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHMATYESGTLLTCGHEGCGCRVRIEVPCHCSGAGEEYRCTCGDALTPVK CCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCC >Mature Secondary Structure SHMATYESGTLLTCGHEGCGCRVRIEVPCHCSGAGEEYRCTCGDALTPVK CCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230 [H]