Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409686

Identifier: 41409686

GI number: 41409686

Start: 3986085

End: 3986534

Strand: Direct

Name: 41409686

Synonym: MAP3588

Alternate gene names: NA

Gene position: 3986085-3986534 (Clockwise)

Preceding gene: 41409685

Following gene: 41409687

Centisome position: 82.53

GC content: 74.67

Gene sequence:

>450_bases
GTGCAGTCGGCCGGCGGCTGGCTCTACGACCGGGCGATGGCCGGCTGGGAGGTGACCGTGCTGCTCCCGCACGGCTGCAA
CACCCGCTCGCTGCGGATCCTGGGGGTGCGCGCCGCCGACCTCGACTCCGGGCTCGCCGGGCTGGGCCAGGGCGCCGCCG
GCCTGGCCGTCAGCGCCGACGCGTTCACCGCCGACGCCCGGGTGCGCGACACGGTGCTCGAATCGCTGCACAACCGGCTC
ACCGCGGTCGCGCTGTGGGGCGACGGCTGGCCGCTGGGCGTGAGCCGCGCGACCACCCGGACCCAGCACCTGCTCAGCGG
AGCCGCGCGCAGGTTCAAGGGCTATGCGCTTGCCGCAGAAGGGATTTCGGACGGCGGCATCGCCCCCGCCGAATCGCTGC
TGTGCGACGTGTGCTCGGCCGCCGACTCAGAGCTGGTCCGGCTCGACTAG

Upstream 100 bases:

>100_bases
GTTCGACATCAGCAAGAGCAGCGCCGCCCGGGTCACCCGCGCGAACGACGAGGGCCTGCGGTATCGGCTCGACGTCGTCG
CCGCCAGCACCGTCGACGTC

Downstream 100 bases:

>100_bases
CCCATGAAGAAGTACTACCGACACACGCTGCTCTACCTGCACGAGACGATCTCGCTGGGATCCGGGCGAAGCGACCGCTT
CACCGAGGTCTTCACCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MQSAGGWLYDRAMAGWEVTVLLPHGCNTRSLRILGVRAADLDSGLAGLGQGAAGLAVSADAFTADARVRDTVLESLHNRL
TAVALWGDGWPLGVSRATTRTQHLLSGAARRFKGYALAAEGISDGGIAPAESLLCDVCSAADSELVRLD

Sequences:

>Translated_149_residues
MQSAGGWLYDRAMAGWEVTVLLPHGCNTRSLRILGVRAADLDSGLAGLGQGAAGLAVSADAFTADARVRDTVLESLHNRL
TAVALWGDGWPLGVSRATTRTQHLLSGAARRFKGYALAAEGISDGGIAPAESLLCDVCSAADSELVRLD
>Mature_149_residues
MQSAGGWLYDRAMAGWEVTVLLPHGCNTRSLRILGVRAADLDSGLAGLGQGAAGLAVSADAFTADARVRDTVLESLHNRL
TAVALWGDGWPLGVSRATTRTQHLLSGAARRFKGYALAAEGISDGGIAPAESLLCDVCSAADSELVRLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15463; Mature: 15463

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSAGGWLYDRAMAGWEVTVLLPHGCNTRSLRILGVRAADLDSGLAGLGQGAAGLAVSAD
CCCCCCCHHHHHCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCHHCCCCCCCEEEECC
AFTADARVRDTVLESLHNRLTAVALWGDGWPLGVSRATTRTQHLLSGAARRFKGYALAAE
CCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEC
GISDGGIAPAESLLCDVCSAADSELVRLD
CCCCCCCCHHHHHHHHHHHCCCCCEEECC
>Mature Secondary Structure
MQSAGGWLYDRAMAGWEVTVLLPHGCNTRSLRILGVRAADLDSGLAGLGQGAAGLAVSAD
CCCCCCCHHHHHCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCHHCCCCCCCEEEECC
AFTADARVRDTVLESLHNRLTAVALWGDGWPLGVSRATTRTQHLLSGAARRFKGYALAAE
CCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEC
GISDGGIAPAESLLCDVCSAADSELVRLD
CCCCCCCCHHHHHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA