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The map label for this gene is dps [H]

Identifier: 41409658

GI number: 41409658

Start: 3959610

End: 3960158

Strand: Direct

Name: dps [H]

Synonym: MAP3560

Alternate gene names: 41409658

Gene position: 3959610-3960158 (Clockwise)

Preceding gene: 41409657

Following gene: 41409659

Centisome position: 81.98

GC content: 63.39

Gene sequence:

>549_bases
ATGAGTGAGTTCACAATTCCGGGATTGACCGACAAGCAGGCGGCGCGGCTCACCGAACTGCTGCAAAAGCAACTGAGCAC
CTACAACGATCTTCACCTGACGCTCAAGCACATTCACTGGAACGTGGTGGGCCCCAACTTCATCGGCGTGCACGAGATGA
TCGACCCGCAAGTCGAGGCGGTCCGCGGTTTCGCCGACGACGTCGCGGAACGCATTGCGGCGCTTGGTGCTTCGCCGCAG
GGCACGCCCGGAGCCATCATCAAGGACCGGTCGTGGGACGACTACTCGGTGGGCCGCGACACCGTCCAGGCGCACTTGGC
CGCCCTCGATCTCGTCTACAACGGGGTGATCGAAGACATCCGCCAATACATCGACGAGACGGACGAACTCGACCAGGTGA
CCCAGGACCTGTTGATCGGGCAGGCGGCGCAGCTCGAGAAGTTCCAATGGTTCGTCCGGGCACACCTGGAAAGCGCCGGC
GGGCAGTTGGCGCACAAGGGCAAAAGCACCGAACGCGCCGCCGCGCAGAGCGCGCGCGGCAAATCCTGA

Upstream 100 bases:

>100_bases
CACTCGCTTTGATTCGCGGCGTTTTTCGCACCTTGGCATCGGGTACTCGACAGCCCAAGTGACCGAGTGTGAACCGAGGG
AAGGAAGCCAGGAACAAGCG

Downstream 100 bases:

>100_bases
CCCACCCCGCAGCGAACGACGGATCGCCCCGGCGCAGCGCCGGGGCGATCGCGCGTCCGGCCCCTCAGGAATAAGTGGAC
CGTAGTCCGGTTATACCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSEFTIPGLTDKQAARLTELLQKQLSTYNDLHLTLKHIHWNVVGPNFIGVHEMIDPQVEAVRGFADDVAERIAALGASPQ
GTPGAIIKDRSWDDYSVGRDTVQAHLAALDLVYNGVIEDIRQYIDETDELDQVTQDLLIGQAAQLEKFQWFVRAHLESAG
GQLAHKGKSTERAAAQSARGKS

Sequences:

>Translated_182_residues
MSEFTIPGLTDKQAARLTELLQKQLSTYNDLHLTLKHIHWNVVGPNFIGVHEMIDPQVEAVRGFADDVAERIAALGASPQ
GTPGAIIKDRSWDDYSVGRDTVQAHLAALDLVYNGVIEDIRQYIDETDELDQVTQDLLIGQAAQLEKFQWFVRAHLESAG
GQLAHKGKSTERAAAQSARGKS
>Mature_181_residues
SEFTIPGLTDKQAARLTELLQKQLSTYNDLHLTLKHIHWNVVGPNFIGVHEMIDPQVEAVRGFADDVAERIAALGASPQG
TPGAIIKDRSWDDYSVGRDTVQAHLAALDLVYNGVIEDIRQYIDETDELDQVTQDLLIGQAAQLEKFQWFVRAHLESAGG
QLAHKGKSTERAAAQSARGKS

Specific function: Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction. It pr

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family [H]

Homologues:

Organism=Escherichia coli, GI1787032, Length=154, Percent_Identity=35.0649350649351, Blast_Score=87, Evalue=5e-19,

Paralogues:

None

Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002177
- InterPro:   IPR023188
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 20059; Mature: 19927

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00818 DPS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEFTIPGLTDKQAARLTELLQKQLSTYNDLHLTLKHIHWNVVGPNFIGVHEMIDPQVEA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHCHHHHH
VRGFADDVAERIAALGASPQGTPGAIIKDRSWDDYSVGRDTVQAHLAALDLVYNGVIEDI
HHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHH
RQYIDETDELDQVTQDLLIGQAAQLEKFQWFVRAHLESAGGQLAHKGKSTERAAAQSARG
HHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCC
KS
CC
>Mature Secondary Structure 
SEFTIPGLTDKQAARLTELLQKQLSTYNDLHLTLKHIHWNVVGPNFIGVHEMIDPQVEA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHCHHHHH
VRGFADDVAERIAALGASPQGTPGAIIKDRSWDDYSVGRDTVQAHLAALDLVYNGVIEDI
HHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHH
RQYIDETDELDQVTQDLLIGQAAQLEKFQWFVRAHLESAGGQLAHKGKSTERAAAQSARG
HHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCC
KS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA