| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yhhW [C]
Identifier: 41409659
GI number: 41409659
Start: 3960284
End: 3961270
Strand: Direct
Name: yhhW [C]
Synonym: MAP3561
Alternate gene names: 41409659
Gene position: 3960284-3961270 (Clockwise)
Preceding gene: 41409658
Following gene: 41409660
Centisome position: 82.0
GC content: 69.91
Gene sequence:
>987_bases ATGCCTGCAGTCACGGCCAACACGCTCACCTTGCCGCGGGTCGGTGGCCCCGGCCCCGCCGACACGGAACGCCCGGTGCG ATCCATCACCACCGGCCCGCGGGGCTACGAGGGCGAAGGGTTCCCGGTGGTGCGCGCCTTCGCCGGGGTCAGCACCGCCG CCCTGGACCCGTTCGTGCACATGGACCAGCTGGGCGAGGTCGACTATCAGCCCGGCGAGCCCCGGGGCACCGACTGGCAC CCGCACCGCGGCTTCGAAACCGTGACCTATCTGCTCGACGGGAAGTTCGCCCACCAGGACTCGTACGGGGGCGGGGGCCT GATCACCGACGGCGCCACCCAGTGGATGACCGCCGGGTCGGGCATCTTGCACATCGAGACGCCACCGGCCGAACTTGTCG ACAGCGGTGGGCTGTTCCACGGCATCCAGCTGTGGGTGAACCTGCCCCGCAAGGACAAGTTCACCCCGCCCCGCTACCAG GCCATCGAAGGCGGCGACGTCGCGTTACTGGCCTCCGACGACGGCGGCGCGCTGCTGCGCATCATCGCCGGCGAGGTCGA CGGGCACCACGGCCCGGGCGTCACCCACACGCCGATCACGCTGGCGCACGCGACGATCGCGAACGGCGCGCGGCTCAACC TTCCGTGGCGGCGCGATTTCAACGCGCTGGTGTACGTGCTGTCCGGCGACGGCTACGTCGGCCCGGTCGCGCACCCGATT CGTCCGGGGCAGTTGGCCGTGCTGGGGCAGGGTGACCGGATCACCGTCGGCGCGCGCGAGGTCCAGGATTCGGGGCCGGA TCGCGGCGCCATTGATGTGCTGCTGCTCGGCGGGCGGCCCATTCGCGAGCCGGTATTCCACTACGGGCCTTTCGTGATGA ACACGCGCACGGAATTGATCGAGGCGCTGCAGGACTACCAAGCCGGAAAGTTTGGCAGCATTCCGCCAAACGCGCTAATG CCGCACCGCCGCGATGGCACACTCTGA
Upstream 100 bases:
>100_bases GCCCCGGCGCAGCGCCGGGGCGATCGCGCGTCCGGCCCCTCAGGAATAAGTGGACCGTAGTCCGGTTATACCGGGTAGTC CGCAACATCGAGGAGGCCAA
Downstream 100 bases:
>100_bases GAATGCTTCCACGGGGGAATCGCAGGCCAGGGCGTCCGCCTGCGGCCAAAGCCGATGAAACCCGGCAACGCATCATTCAG GCCGCTCGCCTGGTTTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MPAVTANTLTLPRVGGPGPADTERPVRSITTGPRGYEGEGFPVVRAFAGVSTAALDPFVHMDQLGEVDYQPGEPRGTDWH PHRGFETVTYLLDGKFAHQDSYGGGGLITDGATQWMTAGSGILHIETPPAELVDSGGLFHGIQLWVNLPRKDKFTPPRYQ AIEGGDVALLASDDGGALLRIIAGEVDGHHGPGVTHTPITLAHATIANGARLNLPWRRDFNALVYVLSGDGYVGPVAHPI RPGQLAVLGQGDRITVGAREVQDSGPDRGAIDVLLLGGRPIREPVFHYGPFVMNTRTELIEALQDYQAGKFGSIPPNALM PHRRDGTL
Sequences:
>Translated_328_residues MPAVTANTLTLPRVGGPGPADTERPVRSITTGPRGYEGEGFPVVRAFAGVSTAALDPFVHMDQLGEVDYQPGEPRGTDWH PHRGFETVTYLLDGKFAHQDSYGGGGLITDGATQWMTAGSGILHIETPPAELVDSGGLFHGIQLWVNLPRKDKFTPPRYQ AIEGGDVALLASDDGGALLRIIAGEVDGHHGPGVTHTPITLAHATIANGARLNLPWRRDFNALVYVLSGDGYVGPVAHPI RPGQLAVLGQGDRITVGAREVQDSGPDRGAIDVLLLGGRPIREPVFHYGPFVMNTRTELIEALQDYQAGKFGSIPPNALM PHRRDGTL >Mature_327_residues PAVTANTLTLPRVGGPGPADTERPVRSITTGPRGYEGEGFPVVRAFAGVSTAALDPFVHMDQLGEVDYQPGEPRGTDWHP HRGFETVTYLLDGKFAHQDSYGGGGLITDGATQWMTAGSGILHIETPPAELVDSGGLFHGIQLWVNLPRKDKFTPPRYQA IEGGDVALLASDDGGALLRIIAGEVDGHHGPGVTHTPITLAHATIANGARLNLPWRRDFNALVYVLSGDGYVGPVAHPIR PGQLAVLGQGDRITVGAREVQDSGPDRGAIDVLLLGGRPIREPVFHYGPFVMNTRTELIEALQDYQAGKFGSIPPNALMP HRRDGTL
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=279, Percent_Identity=37.9928315412186, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI4505823, Length=279, Percent_Identity=37.9928315412186, Blast_Score=174, Evalue=1e-43, Organism=Escherichia coli, GI1789847, Length=103, Percent_Identity=34.9514563106796, Blast_Score=61, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 34968; Mature: 34837
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAVTANTLTLPRVGGPGPADTERPVRSITTGPRGYEGEGFPVVRAFAGVSTAALDPFVH CCCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHCCHHH MDQLGEVDYQPGEPRGTDWHPHRGFETVTYLLDGKFAHQDSYGGGGLITDGATQWMTAGS HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEECCCCCCCCEEEECCCHHHEECCC GILHIETPPAELVDSGGLFHGIQLWVNLPRKDKFTPPRYQAIEGGDVALLASDDGGALLR CEEEEECCHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCEEEEEECCCCEEEE IIAGEVDGHHGPGVTHTPITLAHATIANGARLNLPWRRDFNALVYVLSGDGYVGPVAHPI EEEECCCCCCCCCCCCCCEEEEEEEECCCCEECCCCCCCCCEEEEEEECCCCCCCCCCCC RPGQLAVLGQGDRITVGAREVQDSGPDRGAIDVLLLGGRPIREPVFHYGPFVMNTRTELI CCCCEEEEECCCEEEECHHHHHCCCCCCCCEEEEEECCCCCCCCHHHCCCEEECCHHHHH EALQDYQAGKFGSIPPNALMPHRRDGTL HHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PAVTANTLTLPRVGGPGPADTERPVRSITTGPRGYEGEGFPVVRAFAGVSTAALDPFVH CCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHCCHHH MDQLGEVDYQPGEPRGTDWHPHRGFETVTYLLDGKFAHQDSYGGGGLITDGATQWMTAGS HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEECCCCCCCCEEEECCCHHHEECCC GILHIETPPAELVDSGGLFHGIQLWVNLPRKDKFTPPRYQAIEGGDVALLASDDGGALLR CEEEEECCHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCEEEEEECCCCEEEE IIAGEVDGHHGPGVTHTPITLAHATIANGARLNLPWRRDFNALVYVLSGDGYVGPVAHPI EEEECCCCCCCCCCCCCCEEEEEEEECCCCEECCCCCCCCCEEEEEEECCCCCCCCCCCC RPGQLAVLGQGDRITVGAREVQDSGPDRGAIDVLLLGGRPIREPVFHYGPFVMNTRTELI CCCCEEEEECCCEEEECHHHHHCCCCCCCCEEEEEECCCCCCCCHHHCCCEEECCHHHHH EALQDYQAGKFGSIPPNALMPHRRDGTL HHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]