| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409647
Identifier: 41409647
GI number: 41409647
Start: 3950823
End: 3951983
Strand: Direct
Name: 41409647
Synonym: MAP3549
Alternate gene names: NA
Gene position: 3950823-3951983 (Clockwise)
Preceding gene: 41409644
Following gene: 41409648
Centisome position: 81.8
GC content: 68.22
Gene sequence:
>1161_bases ATGGCCGCGATGGCCCCGCAGTGCCCGCTGGATGCCGACGCGCTGCACGCCCAGGCCAGCGCCGACACCGGCCTGCACGA CTTCGGGCCCGACGACTACCGGGAGCGCCTCGCCGTCTACCTGACCGCGCTGCGCGAAATCGACGGGCTGCACGCCGCCG GGACGGTCAACTTCTACGGTCAGCTGCTGCAGATCCTCAAGAACCGGCTGCTGCTGACCGACCTGCTCAAGCGCCATCCC GAGATCCACGACATCGAACTGCACTCCCCGGTGGTGATCGCCGGGCTGCCCCGCACCGGCACCACCCACCTGCACAACCT GCTGGCCGCGCCACCAACCTTCCGCACCATGCCCTACTGGGAAAGCGTGGAGCCGTTTCCGATGCCCAATGAGGTTGGCG TGCAACCGGATCCGCGGCGAACCCGGATGGACGTCGCGGTCGGGGTGATCAACACGGTGATGCCGCATTTCGCGCTAATG CACGAGATGACCACCGATCACGTCCACGAGGAGATCCAGTTGCTGGCCAACGACGTGTCCACCATGCTGCTGGAGACGCT CGCCGAGGTGCCGCGCTGGCGCGCCTACTACCAGGCCCACGATCAGACGCCGCACTACGAATATCTGGCCACCCAGCTGC GGGCGATGCAGTTCCTGCGCGGCGGCCGGCGCTGGCTGCTCAAGTCGCCCCAGCATCTCGAGCAGGTGCCGGTGCTGGAT CGGGTGTTCCCGGACAGCATCGTCGTGTTCACCCACCGCGACCCGGTGCCGGTGGCGCTGTCGATGATCGCGATGATCAC CTACTCGGCCCGCATGCACCGCTCGCCGGTGCCGGTGCGCCAGATCGCCGAGTCCTGGATCGACCGCCTGGGGCAGATGC TGGCCGCGCTGGTCCGTGACCGCGACGTCATCGGCCCGGACCGTTCGATCGACATCCGCTTCGACGACTTCATGGCCGAC GAACTCGGCGTGGCCGAGCGGGTATACGCCCTGGCGGACGAGCCGTTCACCGACGACGCGCGCGCGGCCGTCGCCGACTA CCTGGCGGGTCACCGCCGCGGCCGGCTGGGCAACGTCGAAACGTCCTTCGAGATGTTCGGGTTGGACGAGGAGAGCCTGC GCGAGCGTTTCGCCCCCTACGTCGAGCGGTTCCTGGCCTAA
Upstream 100 bases:
>100_bases CATTACGAAACTCAGAGTAACATAAGTCGGCGTGACCGTTCGCCTCGAAGACCTGGCCGAGCCGCAGTTCAGCGCCGAGG GCCAACAGATCCTGGACATG
Downstream 100 bases:
>100_bases TCCCGCGCCGGCGGCTACTTTCTCAACACATGGTCACCATGCCCGAGCTCGACGGCGTCGAACACCGCTACGTGGATCTC GGAGACGACGTGACGATCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MAAMAPQCPLDADALHAQASADTGLHDFGPDDYRERLAVYLTALREIDGLHAAGTVNFYGQLLQILKNRLLLTDLLKRHP EIHDIELHSPVVIAGLPRTGTTHLHNLLAAPPTFRTMPYWESVEPFPMPNEVGVQPDPRRTRMDVAVGVINTVMPHFALM HEMTTDHVHEEIQLLANDVSTMLLETLAEVPRWRAYYQAHDQTPHYEYLATQLRAMQFLRGGRRWLLKSPQHLEQVPVLD RVFPDSIVVFTHRDPVPVALSMIAMITYSARMHRSPVPVRQIAESWIDRLGQMLAALVRDRDVIGPDRSIDIRFDDFMAD ELGVAERVYALADEPFTDDARAAVADYLAGHRRGRLGNVETSFEMFGLDEESLRERFAPYVERFLA
Sequences:
>Translated_386_residues MAAMAPQCPLDADALHAQASADTGLHDFGPDDYRERLAVYLTALREIDGLHAAGTVNFYGQLLQILKNRLLLTDLLKRHP EIHDIELHSPVVIAGLPRTGTTHLHNLLAAPPTFRTMPYWESVEPFPMPNEVGVQPDPRRTRMDVAVGVINTVMPHFALM HEMTTDHVHEEIQLLANDVSTMLLETLAEVPRWRAYYQAHDQTPHYEYLATQLRAMQFLRGGRRWLLKSPQHLEQVPVLD RVFPDSIVVFTHRDPVPVALSMIAMITYSARMHRSPVPVRQIAESWIDRLGQMLAALVRDRDVIGPDRSIDIRFDDFMAD ELGVAERVYALADEPFTDDARAAVADYLAGHRRGRLGNVETSFEMFGLDEESLRERFAPYVERFLA >Mature_385_residues AAMAPQCPLDADALHAQASADTGLHDFGPDDYRERLAVYLTALREIDGLHAAGTVNFYGQLLQILKNRLLLTDLLKRHPE IHDIELHSPVVIAGLPRTGTTHLHNLLAAPPTFRTMPYWESVEPFPMPNEVGVQPDPRRTRMDVAVGVINTVMPHFALMH EMTTDHVHEEIQLLANDVSTMLLETLAEVPRWRAYYQAHDQTPHYEYLATQLRAMQFLRGGRRWLLKSPQHLEQVPVLDR VFPDSIVVFTHRDPVPVALSMIAMITYSARMHRSPVPVRQIAESWIDRLGQMLAALVRDRDVIGPDRSIDIRFDDFMADE LGVAERVYALADEPFTDDARAAVADYLAGHRRGRLGNVETSFEMFGLDEESLRERFAPYVERFLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43837; Mature: 43706
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAMAPQCPLDADALHAQASADTGLHDFGPDDYRERLAVYLTALREIDGLHAAGTVNFYG CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH QLLQILKNRLLLTDLLKRHPEIHDIELHSPVVIAGLPRTGTTHLHNLLAAPPTFRTMPYW HHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCC ESVEPFPMPNEVGVQPDPRRTRMDVAVGVINTVMPHFALMHEMTTDHVHEEIQLLANDVS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TMLLETLAEVPRWRAYYQAHDQTPHYEYLATQLRAMQFLRGGRRWLLKSPQHLEQVPVLD HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHCCHHH RVFPDSIVVFTHRDPVPVALSMIAMITYSARMHRSPVPVRQIAESWIDRLGQMLAALVRD HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC RDVIGPDRSIDIRFDDFMADELGVAERVYALADEPFTDDARAAVADYLAGHRRGRLGNVE CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC TSFEMFGLDEESLRERFAPYVERFLA CCHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure AAMAPQCPLDADALHAQASADTGLHDFGPDDYRERLAVYLTALREIDGLHAAGTVNFYG CCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH QLLQILKNRLLLTDLLKRHPEIHDIELHSPVVIAGLPRTGTTHLHNLLAAPPTFRTMPYW HHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCC ESVEPFPMPNEVGVQPDPRRTRMDVAVGVINTVMPHFALMHEMTTDHVHEEIQLLANDVS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TMLLETLAEVPRWRAYYQAHDQTPHYEYLATQLRAMQFLRGGRRWLLKSPQHLEQVPVLD HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHCCHHH RVFPDSIVVFTHRDPVPVALSMIAMITYSARMHRSPVPVRQIAESWIDRLGQMLAALVRD HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC RDVIGPDRSIDIRFDDFMADELGVAERVYALADEPFTDDARAAVADYLAGHRRGRLGNVE CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC TSFEMFGLDEESLRERFAPYVERFLA CCHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA