| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409593
Identifier: 41409593
GI number: 41409593
Start: 3887836
End: 3888603
Strand: Reverse
Name: 41409593
Synonym: MAP3495c
Alternate gene names: NA
Gene position: 3888603-3887836 (Counterclockwise)
Preceding gene: 41409596
Following gene: 41409587
Centisome position: 80.51
GC content: 68.75
Gene sequence:
>768_bases GTGTCGGCTGGGCACAATGGCGACATGTTGGCACGCCATGTCATTCGTTCTCTCGGTTCAGCACTAGTTATGGCAGCCTC GGGTGTGGCCGCGTCGGCGGTGTCCGGTTCGGTCATCCCCACCGCTGCGGCCCAATGTCCGGACGTGCAAGTGGTCTTCG CGCGGGGCACCGGTGAAGCCCCCGGCGTCGGCCCCACCGGACAGGCCTTCGTCGACGCCCTGCACCAACGCGTGGGGGGC CGCTCCTTCGACGTCTACCCGGTCAACTACCCGGCCACCGATCAGTGGGACACCGGCATCGACGGCATCCGGGACGCCGG CGCACACGTCGTCTCGATGGCCCACGACTGCCCCAACACCAAGATGGTGCTCGGCGGCTACTCGCAGGGCGCGGCCGTGA TGGGCTTCGTCACCTCGCCGGCCGTGCCCGACGGCATCGACCCGGCCACCGTGCCCAAACCCCTCACCCCGGACGTCGCC AACCACGTCTCCTCGGTCGTGCTGTTCGGCATGCCCAACGTGCGCGCGATGAACTTCCTCGGCGAACCGCCTGTGGTCAT CGGTCCGCTCTTCCAGGACAAGACCCTCAAGGTGTGCGCCACCGAGGATCCGGTGTGCTCGGACGGCATGAACTTCGCCG CCCACGACACCTACGCCGACGACGGCGCCATGATCGACAAGGGCGTCTCCTTCGCCTCCAGCCACCTCGGCCTCGGCGGT CCCGGCGCGGCGTCGGTCGCCTCCGGGCACGGCAATTTCGGGGAGTGA
Upstream 100 bases:
>100_bases GCCGGATGCGCGCCGCGCGCAACCGATCTCAGCCGTCCGCCCGGGCGGCGGCGCATTTATGAGAACACGGTAATTTCAGC GTTTCCTGGGTTTAAGCGGC
Downstream 100 bases:
>100_bases GCGCACCGCGGGCCGCTAGTCCCCGATGAACCCCTTGGTGCGCATCAGCGCGTCGGCCAGATATCCGTCGTGCGGGACGC CCGGGGCGGTCGACCACGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MSAGHNGDMLARHVIRSLGSALVMAASGVAASAVSGSVIPTAAAQCPDVQVVFARGTGEAPGVGPTGQAFVDALHQRVGG RSFDVYPVNYPATDQWDTGIDGIRDAGAHVVSMAHDCPNTKMVLGGYSQGAAVMGFVTSPAVPDGIDPATVPKPLTPDVA NHVSSVVLFGMPNVRAMNFLGEPPVVIGPLFQDKTLKVCATEDPVCSDGMNFAAHDTYADDGAMIDKGVSFASSHLGLGG PGAASVASGHGNFGE
Sequences:
>Translated_255_residues MSAGHNGDMLARHVIRSLGSALVMAASGVAASAVSGSVIPTAAAQCPDVQVVFARGTGEAPGVGPTGQAFVDALHQRVGG RSFDVYPVNYPATDQWDTGIDGIRDAGAHVVSMAHDCPNTKMVLGGYSQGAAVMGFVTSPAVPDGIDPATVPKPLTPDVA NHVSSVVLFGMPNVRAMNFLGEPPVVIGPLFQDKTLKVCATEDPVCSDGMNFAAHDTYADDGAMIDKGVSFASSHLGLGG PGAASVASGHGNFGE >Mature_254_residues SAGHNGDMLARHVIRSLGSALVMAASGVAASAVSGSVIPTAAAQCPDVQVVFARGTGEAPGVGPTGQAFVDALHQRVGGR SFDVYPVNYPATDQWDTGIDGIRDAGAHVVSMAHDCPNTKMVLGGYSQGAAVMGFVTSPAVPDGIDPATVPKPLTPDVAN HVSSVVLFGMPNVRAMNFLGEPPVVIGPLFQDKTLKVCATEDPVCSDGMNFAAHDTYADDGAMIDKGVSFASSHLGLGGP GAASVASGHGNFGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cutinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000675 - InterPro: IPR011150 [H]
Pfam domain/function: PF01083 Cutinase [H]
EC number: =3.1.1.74 [H]
Molecular weight: Translated: 25770; Mature: 25639
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGHNGDMLARHVIRSLGSALVMAASGVAASAVSGSVIPTAAAQCPDVQVVFARGTGEA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHCCCCCEEEEEEECCCCC PGVGPTGQAFVDALHQRVGGRSFDVYPVNYPATDQWDTGIDGIRDAGAHVVSMAHDCPNT CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC KMVLGGYSQGAAVMGFVTSPAVPDGIDPATVPKPLTPDVANHVSSVVLFGMPNVRAMNFL EEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCCHHHHHC GEPPVVIGPLFQDKTLKVCATEDPVCSDGMNFAAHDTYADDGAMIDKGVSFASSHLGLGG CCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHHHCCCCCC PGAASVASGHGNFGE CCCCHHCCCCCCCCC >Mature Secondary Structure SAGHNGDMLARHVIRSLGSALVMAASGVAASAVSGSVIPTAAAQCPDVQVVFARGTGEA CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHCCCCCEEEEEEECCCCC PGVGPTGQAFVDALHQRVGGRSFDVYPVNYPATDQWDTGIDGIRDAGAHVVSMAHDCPNT CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC KMVLGGYSQGAAVMGFVTSPAVPDGIDPATVPKPLTPDVANHVSSVVLFGMPNVRAMNFL EEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCCHHHHHC GEPPVVIGPLFQDKTLKVCATEDPVCSDGMNFAAHDTYADDGAMIDKGVSFASSHLGLGG CCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHHHCCCCCC PGAASVASGHGNFGE CCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]