| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409534
Identifier: 41409534
GI number: 41409534
Start: 3816010
End: 3816705
Strand: Reverse
Name: 41409534
Synonym: MAP3436c
Alternate gene names: NA
Gene position: 3816705-3816010 (Counterclockwise)
Preceding gene: 41409535
Following gene: 41409533
Centisome position: 79.02
GC content: 60.2
Gene sequence:
>696_bases GTGAGCATCATCGCCACAGCCACGTTGGTCATTGCGCTAGCTGCCTTGTGGAGCATCCGTTTGGCCTGGCACATCCCGTT CGAGCGAGCAGCAGTGTTGGCACTGGCGTTTATGTGTGCCCAGTTGGTCCTGGCGCTCGGGCCGGTGGACGGGTGGCTGA GCCCATTGCTCCACGACATGACGGGCGTGTGGAACCTCGAAGACCTCATCGGCCATCTGCTCTACGTGTACGGCTTGTTC TCGATCATGTATCTGGTCGCTGACCACTGCGACATGACGCCGGGTCAGCTCAGGTGGTTCGTTCGGAACCGGTTGGAACT GCCGTCGGTCGTGATCTGCGCCGTCATGATCGCGGTCTTCGTCGCAGGCGACATCGGCGAGACCTGTGTTCCCGATGTTG TGGCCACAGAACACACGCCCTGGCTCCGCGTCTACTGGTTCGTAATGATCGCGGCTCTTGCGTACATCATTGTCTCTACC GGTCGAATCCTGTTGATCCTGAGGCAGCACCCACGCTCGAGGCATGCCGCCACGGCCTATCTCGTAGCGCTCGGTATCAC TGGCGCGTGCTGCGTGGTTTTCATCATCGGAATCCCTTGGCTGCAATGGCTTCTCGTGCGGTGCGAGGTAGTCGGCTATG CGGTGGCCGCCTCGTACTCCTGGCGTAACAAAGTGGCTTACTTTCGTGGACGCTAG
Upstream 100 bases:
>100_bases CCCAGGCGGTCGATGTTCCGCTGGACAAGCTGCTCGCCGGAGACGACGATGAGCGGCCCTTCCGCCTGAGTGACTTGAGA CCTCGACCCGATCGACCTCT
Downstream 100 bases:
>100_bases ACGATCCGCTTCGCCACCCCGCTCAATGAGGGGCCCACGCCTCGACCGCCGCCTGCACTCACACCCGCGACGTGAACGCG AAAATTAGGACGGACGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSIIATATLVIALAALWSIRLAWHIPFERAAVLALAFMCAQLVLALGPVDGWLSPLLHDMTGVWNLEDLIGHLLYVYGLF SIMYLVADHCDMTPGQLRWFVRNRLELPSVVICAVMIAVFVAGDIGETCVPDVVATEHTPWLRVYWFVMIAALAYIIVST GRILLILRQHPRSRHAATAYLVALGITGACCVVFIIGIPWLQWLLVRCEVVGYAVAASYSWRNKVAYFRGR
Sequences:
>Translated_231_residues MSIIATATLVIALAALWSIRLAWHIPFERAAVLALAFMCAQLVLALGPVDGWLSPLLHDMTGVWNLEDLIGHLLYVYGLF SIMYLVADHCDMTPGQLRWFVRNRLELPSVVICAVMIAVFVAGDIGETCVPDVVATEHTPWLRVYWFVMIAALAYIIVST GRILLILRQHPRSRHAATAYLVALGITGACCVVFIIGIPWLQWLLVRCEVVGYAVAASYSWRNKVAYFRGR >Mature_230_residues SIIATATLVIALAALWSIRLAWHIPFERAAVLALAFMCAQLVLALGPVDGWLSPLLHDMTGVWNLEDLIGHLLYVYGLFS IMYLVADHCDMTPGQLRWFVRNRLELPSVVICAVMIAVFVAGDIGETCVPDVVATEHTPWLRVYWFVMIAALAYIIVSTG RILLILRQHPRSRHAATAYLVALGITGACCVVFIIGIPWLQWLLVRCEVVGYAVAASYSWRNKVAYFRGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25740; Mature: 25609
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIATATLVIALAALWSIRLAWHIPFERAAVLALAFMCAQLVLALGPVDGWLSPLLHDM CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH TGVWNLEDLIGHLLYVYGLFSIMYLVADHCDMTPGQLRWFVRNRLELPSVVICAVMIAVF HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH VAGDIGETCVPDVVATEHTPWLRVYWFVMIAALAYIIVSTGRILLILRQHPRSRHAATAY HHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH LVALGITGACCVVFIIGIPWLQWLLVRCEVVGYAVAASYSWRNKVAYFRGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEECCC >Mature Secondary Structure SIIATATLVIALAALWSIRLAWHIPFERAAVLALAFMCAQLVLALGPVDGWLSPLLHDM CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH TGVWNLEDLIGHLLYVYGLFSIMYLVADHCDMTPGQLRWFVRNRLELPSVVICAVMIAVF HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH VAGDIGETCVPDVVATEHTPWLRVYWFVMIAALAYIIVSTGRILLILRQHPRSRHAATAY HHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH LVALGITGACCVVFIIGIPWLQWLLVRCEVVGYAVAASYSWRNKVAYFRGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA