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The map label for this gene is ydcJ [C]

Identifier: 41409510

GI number: 41409510

Start: 3786088

End: 3787347

Strand: Direct

Name: ydcJ [C]

Synonym: MAP3412

Alternate gene names: 41409510

Gene position: 3786088-3787347 (Clockwise)

Preceding gene: 41409503

Following gene: 41409511

Centisome position: 78.39

GC content: 73.33

Gene sequence:

>1260_bases
GTGAGCCGGCCGAAATGGTTGCCCACCTGGCGGTTGCGGGCGATGTTCGCCGCGGGCCTCTCGGCGATGTACGCCGCCGA
GGTGCCCGGCTACGCCACCCTGGTGCAGGTGTGCACGCGGGTGAACGCCGATCACGTGGCGCGGCACCCCGACGCCCAAC
GGTGGGGCTCGCTGCGCCGGGTCACCGCCGAGCGGCACGGCGCCATCCGGGTGGGCAGCCCGGCCGAACTGCGCGCGGTC
GCCGATCTTTTCGCCGCGTTCGGCATGGCGCCGGTCGGCTACTACGACCTGCGCCGCGCTGCGTCGCCGATCCCGGTGGT
GTGCACCGCTTTTCGGCCGGTCGACGGCAACGAGTTGTCGCTCAACCCGTTTCGCATGTTCACCTCGATGCTGGCCACCC
GCGACCGGCGCTACTTCGACCGCGACCTGCGCGCCCGGGTGGACAACTTCCTGGCGCACCGGCAGCTGTTCGATCCGGCG
TTGCTGGCCCGGGCCCGGAGCATCGCCGCCGCGGGCGGCTGCGCCGACGATGCCGCCCGGCCGTTCGTCGCGGCCGCGGT
GGCGTCATTCGCGTTGTCCGGCAAGCCGATCGAGCGGTCCTGGTACGACGAGCTGTCGCGGGTGTCGGCGGTGGCCGCCG
ACATCGCCGGTGTCTGCTCCACCCACCTCAACCACCTGACCCCGCGCGTGCTGGACATCGATGAGCTGTACCGGCGGATG
ACCGGGCGCGGCATCGCGATGATCGACGCCATCCAGGGGCCGCCGGCCACCGGCGGGCCGGCGGTGTTGTTGCGGCAGAC
CTCTTTTCGCGCGCTGGCCGAACCCCGCCGGTTCCGCGGCGACGACGGCCGCATCACCGAGGGGACGGTACGGGTGCGCT
TCGGCGAGGTGGAGGCGCGCGGTGTGGCGCTGACCCCGCGGGGCCGCCGCCGCTACGACGCCGCGATGGCCGCCGACGAC
CCGGCCGCGGTGTGGGCCAACTACTTTCCCGCCACCGACGCGCAGATGGCGGCCGAGGGCCTGGGCTACTACTGCGGCGG
CGACCCGTCGGCACCGATCGTCTACGAGGACTTCCTGCCCGCCTCGGCGGCGGGCATCTTCCGGTCCAACCTGGACGCGG
AAACCCCCGGTGCCGCCCAAGCCGCCCCTGCCGTCGATGACTCCGGCTACGACCAGGACTGGCTGGCCGGGGCGCTCGGC
CGCGAGATCCACGACCCCTACCCGCTGTACGAGGCGCTTGCCCAGGAGGCCCCCCGATGA

Upstream 100 bases:

>100_bases
GCGTGGCGCGGCCGTCGGCGACCAGCTCGCGCACCAGAATCCGGTCGACATCGTCGAGCGTCTCACTCATGGCCGGAGAC
TATCGCAGCGGCGGTGCCCG

Downstream 100 bases:

>100_bases
CTTTGCCCACCGCCGCCGAATTGCGCGCCCGCGCCGCCGATGCCCTGCGCTCCCTCGGCGCGCACGTCGAGCTCGGCGCG
CCGGACGCGCACGGGCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSRPKWLPTWRLRAMFAAGLSAMYAAEVPGYATLVQVCTRVNADHVARHPDAQRWGSLRRVTAERHGAIRVGSPAELRAV
ADLFAAFGMAPVGYYDLRRAASPIPVVCTAFRPVDGNELSLNPFRMFTSMLATRDRRYFDRDLRARVDNFLAHRQLFDPA
LLARARSIAAAGGCADDAARPFVAAAVASFALSGKPIERSWYDELSRVSAVAADIAGVCSTHLNHLTPRVLDIDELYRRM
TGRGIAMIDAIQGPPATGGPAVLLRQTSFRALAEPRRFRGDDGRITEGTVRVRFGEVEARGVALTPRGRRRYDAAMAADD
PAAVWANYFPATDAQMAAEGLGYYCGGDPSAPIVYEDFLPASAAGIFRSNLDAETPGAAQAAPAVDDSGYDQDWLAGALG
REIHDPYPLYEALAQEAPR

Sequences:

>Translated_419_residues
MSRPKWLPTWRLRAMFAAGLSAMYAAEVPGYATLVQVCTRVNADHVARHPDAQRWGSLRRVTAERHGAIRVGSPAELRAV
ADLFAAFGMAPVGYYDLRRAASPIPVVCTAFRPVDGNELSLNPFRMFTSMLATRDRRYFDRDLRARVDNFLAHRQLFDPA
LLARARSIAAAGGCADDAARPFVAAAVASFALSGKPIERSWYDELSRVSAVAADIAGVCSTHLNHLTPRVLDIDELYRRM
TGRGIAMIDAIQGPPATGGPAVLLRQTSFRALAEPRRFRGDDGRITEGTVRVRFGEVEARGVALTPRGRRRYDAAMAADD
PAAVWANYFPATDAQMAAEGLGYYCGGDPSAPIVYEDFLPASAAGIFRSNLDAETPGAAQAAPAVDDSGYDQDWLAGALG
REIHDPYPLYEALAQEAPR
>Mature_418_residues
SRPKWLPTWRLRAMFAAGLSAMYAAEVPGYATLVQVCTRVNADHVARHPDAQRWGSLRRVTAERHGAIRVGSPAELRAVA
DLFAAFGMAPVGYYDLRRAASPIPVVCTAFRPVDGNELSLNPFRMFTSMLATRDRRYFDRDLRARVDNFLAHRQLFDPAL
LARARSIAAAGGCADDAARPFVAAAVASFALSGKPIERSWYDELSRVSAVAADIAGVCSTHLNHLTPRVLDIDELYRRMT
GRGIAMIDAIQGPPATGGPAVLLRQTSFRALAEPRRFRGDDGRITEGTVRVRFGEVEARGVALTPRGRRRYDAAMAADDP
AAVWANYFPATDAQMAAEGLGYYCGGDPSAPIVYEDFLPASAAGIFRSNLDAETPGAAQAAPAVDDSGYDQDWLAGALGR
EIHDPYPLYEALAQEAPR

Specific function: Unknown

COG id: COG5383

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydcJ [H]

Homologues:

Organism=Escherichia coli, GI1787692, Length=449, Percent_Identity=35.6347438752784, Blast_Score=231, Evalue=6e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009770 [H]

Pfam domain/function: PF07063 DUF1338 [H]

EC number: NA

Molecular weight: Translated: 45484; Mature: 45353

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPKWLPTWRLRAMFAAGLSAMYAAEVPGYATLVQVCTRVNADHVARHPDAQRWGSLRR
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCCCCHHHHHHHHH
VTAERHGAIRVGSPAELRAVADLFAAFGMAPVGYYDLRRAASPIPVVCTAFRPVDGNELS
HHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCC
LNPFRMFTSMLATRDRRYFDRDLRARVDNFLAHRQLFDPALLARARSIAAAGGCADDAAR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHH
PFVAAAVASFALSGKPIERSWYDELSRVSAVAADIAGVCSTHLNHLTPRVLDIDELYRRM
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHH
TGRGIAMIDAIQGPPATGGPAVLLRQTSFRALAEPRRFRGDDGRITEGTVRVRFGEVEAR
CCCCEEEEECCCCCCCCCCCEEEEECHHHHHHHCHHHHCCCCCCEECCEEEEEECCEECC
GVALTPRGRRRYDAAMAADDPAAVWANYFPATDAQMAAEGLGYYCGGDPSAPIVYEDFLP
CEEECCCCCHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHCCCEEECCCCCCCEEECCCCC
ASAAGIFRSNLDAETPGAAQAAPAVDDSGYDQDWLAGALGREIHDPYPLYEALAQEAPR
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SRPKWLPTWRLRAMFAAGLSAMYAAEVPGYATLVQVCTRVNADHVARHPDAQRWGSLRR
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHCCCCHHHHHHHHH
VTAERHGAIRVGSPAELRAVADLFAAFGMAPVGYYDLRRAASPIPVVCTAFRPVDGNELS
HHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCC
LNPFRMFTSMLATRDRRYFDRDLRARVDNFLAHRQLFDPALLARARSIAAAGGCADDAAR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHH
PFVAAAVASFALSGKPIERSWYDELSRVSAVAADIAGVCSTHLNHLTPRVLDIDELYRRM
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHH
TGRGIAMIDAIQGPPATGGPAVLLRQTSFRALAEPRRFRGDDGRITEGTVRVRFGEVEAR
CCCCEEEEECCCCCCCCCCCEEEEECHHHHHHHCHHHHCCCCCCEECCEEEEEECCEECC
GVALTPRGRRRYDAAMAADDPAAVWANYFPATDAQMAAEGLGYYCGGDPSAPIVYEDFLP
CEEECCCCCHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHCCCEEECCCCCCCEEECCCCC
ASAAGIFRSNLDAETPGAAQAAPAVDDSGYDQDWLAGALGREIHDPYPLYEALAQEAPR
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]