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The map label for this gene is Rv0516c

Identifier: 41409503

GI number: 41409503

Start: 3781199

End: 3781633

Strand: Direct

Name: Rv0516c

Synonym: MAP3405

Alternate gene names: NA

Gene position: 3781199-3781633 (Clockwise)

Preceding gene: 41409502

Following gene: 41409510

Centisome position: 78.29

GC content: 68.05

Gene sequence:

>435_bases
ATGGAGTCAGCGATGTCTGTGGCCCAATCTTGGCAGCAAAGCCGCACCGCACAGTTCACGGCGCGGTGGGGGCTGACCGG
GACCCTGATCACCGTCGACGGCGAACTCGACGCCGCCAACGCCGATCAGCTCGCCGCCTACGTGCAACAGAGCGTCAACC
GTTCCCGCCGCGTGATCCTGGACCTGCGTGGCCTGAATTTCATTGGCACCGCAGGTTTTTCGGCCCTGCATCGGATCAAC
GTGATCTGCTCGGCGGCCCAGACGTCGTGGGCCATGGCGCCCAGCCCCGCGGTGGCGCGGCTGCTGCGGCTGTGCGACCC
GGACGGCACCTTGCCGGTGACCACCCCGAAGGCCGAGCCGCTGCTGGAGCCGCGGCGGGCCAACGACGACGAATCGCCCG
GGCCGCTACTGCAATTGGTCACGAAGCCGCGTTAG

Upstream 100 bases:

>100_bases
CCCGGGATGCGTCGGTGACGTGGAGGCAGGCTGAATTCCCTGCCCCCGCCGAACTTTTCCGGCATCGCCGACGTGTTCCA
CAGCACGATCTCCGCACGGG

Downstream 100 bases:

>100_bases
CGACTTGGCCAGCAGCCGCGACACGTGCATCTGCGAGATGCCCACCCGCTCGGCGATCTGGGTTTGGGTCATCGACTCGA
AGAACCGCAACACCAGCACG

Product: hypothetical protein

Products: NA

Alternate protein names: STAS Domain-Containing Protein

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MESAMSVAQSWQQSRTAQFTARWGLTGTLITVDGELDAANADQLAAYVQQSVNRSRRVILDLRGLNFIGTAGFSALHRIN
VICSAAQTSWAMAPSPAVARLLRLCDPDGTLPVTTPKAEPLLEPRRANDDESPGPLLQLVTKPR

Sequences:

>Translated_144_residues
MESAMSVAQSWQQSRTAQFTARWGLTGTLITVDGELDAANADQLAAYVQQSVNRSRRVILDLRGLNFIGTAGFSALHRIN
VICSAAQTSWAMAPSPAVARLLRLCDPDGTLPVTTPKAEPLLEPRRANDDESPGPLLQLVTKPR
>Mature_144_residues
MESAMSVAQSWQQSRTAQFTARWGLTGTLITVDGELDAANADQLAAYVQQSVNRSRRVILDLRGLNFIGTAGFSALHRIN
VICSAAQTSWAMAPSPAVARLLRLCDPDGTLPVTTPKAEPLLEPRRANDDESPGPLLQLVTKPR

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15569; Mature: 15569

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESAMSVAQSWQQSRTAQFTARWGLTGTLITVDGELDAANADQLAAYVQQSVNRSRRVIL
CCHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEE
DLRGLNFIGTAGFSALHRINVICSAAQTSWAMAPSPAVARLLRLCDPDGTLPVTTPKAEP
EECCCCEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
LLEPRRANDDESPGPLLQLVTKPR
CCCCCCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure
MESAMSVAQSWQQSRTAQFTARWGLTGTLITVDGELDAANADQLAAYVQQSVNRSRRVIL
CCHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEE
DLRGLNFIGTAGFSALHRINVICSAAQTSWAMAPSPAVARLLRLCDPDGTLPVTTPKAEP
EECCCCEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
LLEPRRANDDESPGPLLQLVTKPR
CCCCCCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA