Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is whiB2

Identifier: 41409470

GI number: 41409470

Start: 3746324

End: 3746689

Strand: Reverse

Name: whiB2

Synonym: MAP3372c

Alternate gene names: NA

Gene position: 3746689-3746324 (Counterclockwise)

Preceding gene: 41409476

Following gene: 41409468

Centisome position: 77.57

GC content: 69.4

Gene sequence:

>366_bases
ATGTCTTACGAAAATCTTCGAGGCGCCATGGCGGGCACGCCGCACACCCCGATCGACTCGGCGCCGGCCCGTCCCGTCCG
GCCGCACTTGACCGTGGTTCCTGATGCGCCAGTCGCATTCGAGCCCGAGCCGCTGCCGGCGCCCGTCGCCGACCAGTGGC
AGGACCGGGCGCTGTGCGCGCAAACCGACCCGGAGGCCTTCTTCCCGGAGAAGGGCGGCTCCACCCGCGAGGCCAAGAAG
ATCTGCCTGGGCTGCGAGGTGCGCCACGAATGCCTGGAGTACGCACTCGAGCACGACGAGCGCTTCGGCATCTGGGGCGG
TCTGTCCGAACGCGAACGCCGCCGCCTCAAGCGCGGCATCATCTGA

Upstream 100 bases:

>100_bases
GTGTCGCAGACCGAGATTCGATCACTTGTTCGAATTGTCTGTACATCAGAACAGTGGGAACCAATCACACTCCAATCAAG
CTGAGGAGGCGGACGACCGT

Downstream 100 bases:

>100_bases
CCCGCTCCCGCAACGACCGGGGGTCAGTCGTCGTCGATCGTCGGGTCGATGACCGAGGGTTCCACGTCGAGGTAGATGGC
GACCTGGGCCACCAGGATTT

Product: WhiB2

Products: NA

Alternate protein names: WhiB Family Transcriptional Regulator; WhiB-Family Transcriptional Regulator; Transcriptional Regulator; Transcription Factor WhiB Family Protein; Regulatory Protein; Transcriptional Regulatory; Sporulation Regulatory Protein; Whib-Like Transcriptional Regulator; WhiB Family Transcription Factor; Transcription Factor; Transcription Regulator; Regulatory Protein WhiB; Transcriptional Regulatory Protein; Transcriptional Regulator WhiB; WhiB Family Regulatory Protein; WhiB-Type Transcription Regulator; WhiB Transcriptional Regulator; WhiB Family Transcription Regulator

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MSYENLRGAMAGTPHTPIDSAPARPVRPHLTVVPDAPVAFEPEPLPAPVADQWQDRALCAQTDPEAFFPEKGGSTREAKK
ICLGCEVRHECLEYALEHDERFGIWGGLSERERRRLKRGII

Sequences:

>Translated_121_residues
MSYENLRGAMAGTPHTPIDSAPARPVRPHLTVVPDAPVAFEPEPLPAPVADQWQDRALCAQTDPEAFFPEKGGSTREAKK
ICLGCEVRHECLEYALEHDERFGIWGGLSERERRRLKRGII
>Mature_120_residues
SYENLRGAMAGTPHTPIDSAPARPVRPHLTVVPDAPVAFEPEPLPAPVADQWQDRALCAQTDPEAFFPEKGGSTREAKKI
CLGCEVRHECLEYALEHDERFGIWGGLSERERRRLKRGII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13516; Mature: 13385

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYENLRGAMAGTPHTPIDSAPARPVRPHLTVVPDAPVAFEPEPLPAPVADQWQDRALCA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
QTDPEAFFPEKGGSTREAKKICLGCEVRHECLEYALEHDERFGIWGGLSERERRRLKRGI
CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC
I
C
>Mature Secondary Structure 
SYENLRGAMAGTPHTPIDSAPARPVRPHLTVVPDAPVAFEPEPLPAPVADQWQDRALCA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
QTDPEAFFPEKGGSTREAKKICLGCEVRHECLEYALEHDERFGIWGGLSERERRRLKRGI
CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA