Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409468

Identifier: 41409468

GI number: 41409468

Start: 3745245

End: 3745742

Strand: Reverse

Name: 41409468

Synonym: MAP3370c

Alternate gene names: NA

Gene position: 3745742-3745245 (Counterclockwise)

Preceding gene: 41409470

Following gene: 41409467

Centisome position: 77.56

GC content: 73.49

Gene sequence:

>498_bases
TTGCGCGTGTCCGGCGCTTCGGCGGCGTTTGCGCACGATAGCCTTTCGAGCGTGAACGTTCCCCGTCGCTGTTGCCGGCC
CGGGTGCCCGCACTACGCCGTGGCGACCCTGACGTTCGTCTACTCGGACTCGACGGCAGTCGTCGGCCCGCTGGCGACCG
CACGGGAACCGCATTCCTGGGATTTGTGCGTCAACCACGCCGGCCGGATCACCGCCCCGCGCGGATGGGACCTGGTGCGC
CACGCCGGGCCGCTGCCCACCCACCCCGACGAGGACGACCTGGTCGCCCTCGCCGACGCGGTCCGCGAAGGCGGTTCGGC
CGAGCGCACGCTGCCCTACGCCGGTGCGGCGGTGCCCCGAAACGGCTTCGGCGATCCGCATCTTCACCCCGGCGGCGCCC
AGGCCACCGCGCCGAGCAGCAGCCTGATCGCCCCGCCCGAGCAACGTTCCGGACGGCGCCGCGGGCATCTGCGGGTGCTG
CCCGACCCCAGCGACTGA

Upstream 100 bases:

>100_bases
ATCGTCGCGAAAACCGGCCGCTTCGGCCGGAGCTGCGCGAATCGCCACGGGATTCACTCATCGGGCCGATGGTAACGGTT
GCACATCGGGGGCCGCGGCG

Downstream 100 bases:

>100_bases
CCCGGGCCGCACCCGATGGGGGCGCACCCGAATCCGCGCGCACCGCGGCGGCCGGTGTTCTCCCCGGCCCGATAGGCTGG
CGGCCAAGAGTTCACGTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MRVSGASAAFAHDSLSSVNVPRRCCRPGCPHYAVATLTFVYSDSTAVVGPLATAREPHSWDLCVNHAGRITAPRGWDLVR
HAGPLPTHPDEDDLVALADAVREGGSAERTLPYAGAAVPRNGFGDPHLHPGGAQATAPSSSLIAPPEQRSGRRRGHLRVL
PDPSD

Sequences:

>Translated_165_residues
MRVSGASAAFAHDSLSSVNVPRRCCRPGCPHYAVATLTFVYSDSTAVVGPLATAREPHSWDLCVNHAGRITAPRGWDLVR
HAGPLPTHPDEDDLVALADAVREGGSAERTLPYAGAAVPRNGFGDPHLHPGGAQATAPSSSLIAPPEQRSGRRRGHLRVL
PDPSD
>Mature_165_residues
MRVSGASAAFAHDSLSSVNVPRRCCRPGCPHYAVATLTFVYSDSTAVVGPLATAREPHSWDLCVNHAGRITAPRGWDLVR
HAGPLPTHPDEDDLVALADAVREGGSAERTLPYAGAAVPRNGFGDPHLHPGGAQATAPSSSLIAPPEQRSGRRRGHLRVL
PDPSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17361; Mature: 17361

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSGASAAFAHDSLSSVNVPRRCCRPGCPHYAVATLTFVYSDSTAVVGPLATAREPHSW
CCCCCCCCHHCCCCCCCCCCCHHHCCCCCCCCEEEEEEEEECCCCEEECCCCCCCCCCCC
DLCVNHAGRITAPRGWDLVRHAGPLPTHPDEDDLVALADAVREGGSAERTLPYAGAAVPR
EEEECCCCCEECCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
NGFGDPHLHPGGAQATAPSSSLIAPPEQRSGRRRGHLRVLPDPSD
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEECCCCCC
>Mature Secondary Structure
MRVSGASAAFAHDSLSSVNVPRRCCRPGCPHYAVATLTFVYSDSTAVVGPLATAREPHSW
CCCCCCCCHHCCCCCCCCCCCHHHCCCCCCCCEEEEEEEEECCCCEEECCCCCCCCCCCC
DLCVNHAGRITAPRGWDLVRHAGPLPTHPDEDDLVALADAVREGGSAERTLPYAGAAVPR
EEEECCCCCEECCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
NGFGDPHLHPGGAQATAPSSSLIAPPEQRSGRRRGHLRVLPDPSD
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA